Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of RNA splicing
go back to main search page
Accession:GO:0033120 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of RNA splicing.


show annotations for term's descendants           Sort by:
 
positive regulation of RNA splicing term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A ISO
IMP
(PMID:28377597) RGD PMID:28377597, PMID:28377597 RGD:13464257 NCBI chr11:34,858,339...34,958,733
Ensembl chr11:34,865,532...34,956,536
JBrowse link
G Ern1 endoplasmic reticulum to nucleus signaling 1 ISO (PMID:11779464), (PMID:19622636)
(MGI:MGI:6114871|PMID:25164867)
RGD PMID:11779464, PMID:19622636, PMID:25164867 MGI:MGI:6114871 NCBI chr10:94,588,555...94,682,072
Ensembl chr10:94,588,555...94,681,914
JBrowse link
G Habp4 hyaluronan binding protein 4 ISO
IBA
ISS
(PMID:19523114)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19523114, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr17:1,679,561...1,702,245
Ensembl chr17:1,679,627...1,701,623
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IMP RGD PMID:22684629 RGD:10002775 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
JBrowse link
G Hnrnpll heterogeneous nuclear ribonucleoprotein L-like ISO
IBA
(PMID:18669861)
PMID:21873635
RGD PMID:18669861, PMID:21873635 RGD:13792537 NCBI chr 6:2,698,983...2,729,715
Ensembl chr 6:2,699,961...2,729,394
JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A ISO (PMID:20625543) RGD PMID:20625543 NCBI chr20:4,875,834...4,881,751
Ensembl chr20:4,877,324...4,879,779
JBrowse link
G Hspa1b heat shock protein family A (Hsp70) member 1B ISO (PMID:20625543) RGD PMID:20625543 NCBI chr20:4,877,638...4,880,112
Ensembl chr20:2,699,712...2,701,815
JBrowse link
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 IMP RGD PMID:11118435 RGD:632715 NCBI chr 7:110,031,819...110,179,475
Ensembl chr 7:110,031,696...110,179,468
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:20348923)
Ensembl
UniProt
RGD
PMID:20348923 GO_REF:0000024, GO_REF:0000107 NCBI chr 2:31,742,326...31,826,882
Ensembl chr 2:31,745,088...31,826,867
JBrowse link
G Polr2a RNA polymerase II subunit A ISO (PMID:21536736) RGD PMID:21536736 NCBI chr10:56,339,277...56,364,888
Ensembl chr10:56,339,284...56,365,084
JBrowse link
G Rbm20 RNA binding motif protein 20 IMP
IBA
ISO
PMID:22466703
PMID:21873635
(MGI:MGI:5442495|PMID:22466703)
(PMID:22466703)
RGD PMID:22466703, PMID:22466703, PMID:21873635 MGI:MGI:5442495, RGD:7241566, RGD:13792537 NCBI chr 1:274,391,932...274,589,816
Ensembl chr 1:274,391,932...274,589,816
JBrowse link
G Rbm22 RNA binding motif protein 22 ISO
ISS
(PMID:22246180)
GO_REF:0000024
RGD
UniProt
PMID:22246180 GO_REF:0000024 NCBI chr18:55,828,158...55,839,421
Ensembl chr18:55,828,158...55,838,966
JBrowse link
G Setx senataxin ISO (PMID:19515850) RGD PMID:19515850 NCBI chr 3:7,680,430...7,731,815
Ensembl chr 3:7,686,503...7,730,539
JBrowse link
G Slc38a2 solute carrier family 38, member 2 ISO UniProtKB:P17861 (PMID:22215663) RGD PMID:22215663 NCBI chr 7:138,088,654...138,100,869
Ensembl chr 7:138,088,649...138,100,841
JBrowse link
G Smn1 survival of motor neuron 1, telomeric ISO
IEA
(MGI:MGI:5318917|PMID:22037760)
GO_REF:0000107
RGD
Ensembl
PMID:22037760 GO_REF:0000107, MGI:MGI:5318917 NCBI chr 2:30,360,101...30,371,147
Ensembl chr 2:30,360,100...30,371,147
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 IMP RGD PMID:16308321 RGD:11038784 NCBI chr10:75,334,200...75,341,197
Ensembl chr10:75,335,146...75,341,197
JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 IMP RGD PMID:9199345 RGD:11039429 NCBI chr 6:104,611,026...104,640,033
Ensembl chr 6:104,611,026...104,615,302
JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 ISO (PMID:21536736) RGD PMID:21536736 NCBI chr 1:72,312,260...72,329,828
Ensembl chr 1:72,312,727...72,329,856
JBrowse link
G Zpr1 ZPR1 zinc finger ISO (PMID:11283611) RGD PMID:11283611 NCBI chr 8:50,563,047...50,572,621
Ensembl chr 8:50,563,047...50,572,621
JBrowse link
positive regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07061152.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:106,982,503...106,983,279 JBrowse link
G Celf3 CUGBP, Elav-like family member 3 ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 2:195,716,373...195,732,872
Ensembl chr 2:195,719,543...195,730,274
JBrowse link
G Celf4 CUGBP, Elav-like family member 4 ISO (PMID:15009664) RGD PMID:15009664 NCBI chr18:17,689,090...18,079,835
Ensembl chr18:17,698,038...17,716,880
JBrowse link
G Cirbp cold inducible RNA binding protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:12,400,066...12,405,054
Ensembl chr 7:12,401,207...12,405,022
JBrowse link
G Dazap1 DAZ associated protein 1 ISO
IBA
(MGI:MGI:5532638|PMID:23636947)
PMID:21873635
RGD PMID:23636947, PMID:21873635 MGI:MGI:5532638, RGD:13792537 NCBI chr 7:12,289,895...12,315,897
Ensembl chr 7:12,290,402...12,311,149
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 ISO (MGI:MGI:3814796|PMID:18480465) RGD PMID:18480465 MGI:MGI:3814796 NCBI chr10:108,415,201...108,425,195
Ensembl chr10:108,415,202...108,425,206
JBrowse link
G Hmx2 H6 family homeobox 2 ISO (MGI:MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:MGI:5532638 NCBI chr 1:203,515,605...203,523,266
Ensembl chr 1:203,515,609...203,523,358
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO (MGI:MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:MGI:5532638 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179
JBrowse link
G Lmntd2 lamin tail domain containing 2 ISO (MGI:MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:MGI:5532638 NCBI chr 1:214,197,126...214,202,828
Ensembl chr 1:214,196,430...214,202,853
JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 ISO (PMID:23793891) RGD PMID:23793891 NCBI chr 5:61,734,118...61,767,098
Ensembl chr 5:61,734,118...61,766,481
JBrowse link
G Ncl nucleolin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:93,369,119...93,377,643
Ensembl chr 9:93,368,932...93,377,643
JBrowse link
G Nup98 nucleoporin 98 and 96 precursor ISO
ISS
(PMID:28221134)
GO_REF:0000024
RGD
UniProt
PMID:28221134 GO_REF:0000024 NCBI chr 1:167,213,866...167,308,851
Ensembl chr 1:167,213,866...167,308,851
JBrowse link
G Obi1 ORC ubiquitin ligase 1 ISO (MGI:MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:MGI:5532638 NCBI chr15:88,632,089...88,670,325
Ensembl chr15:88,631,794...88,670,349
JBrowse link
G Prdx6 peroxiredoxin 6 ISO UniProtKB:Q8IWL8 (PMID:16186110) RGD PMID:16186110 NCBI chr13:79,077,567...79,088,113
Ensembl chr13:79,077,033...79,088,127
JBrowse link
G Prpf19 pre-mRNA processing factor 19 ISO (MGI:MGI:3814796|PMID:18480465) RGD PMID:18480465 MGI:MGI:3814796 NCBI chr 1:226,947,065...226,958,147
Ensembl chr 1:226,947,105...226,958,144
JBrowse link
G Rbm3 RNA binding motif protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:15,098,880...15,102,344
Ensembl chr  X:15,098,904...15,102,340
JBrowse link
G Rbmx RNA binding motif protein, X-linked IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:159,881,835...159,891,405
Ensembl chr  X:159,884,885...159,891,326
JBrowse link
G Rbmxl1 RBMX like 1 IDA
IBA
PMID:19282290
PMID:21873635
UniProt
GO_Central
PMID:19282290, PMID:21873635 RGD:2316827, RGD:13792537 NCBI chr19:33,081,473...33,084,988
Ensembl chr19:33,083,412...33,084,915
JBrowse link
G Rbmxl1b RNA binding motif protein, X-linked-like 1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:42,186,612...42,188,294
Ensembl chr 4:42,186,612...42,188,289
JBrowse link
G Rbmy1j RNA binding motif protein, Y-linked, family 1, member J IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  Y:380,337...390,669
Ensembl chr  Y:380,382...390,667
JBrowse link
G Sf3b4 splicing factor 3b, subunit 4 ISO
IBA
(MGI:MGI:5532638|PMID:23636947)
PMID:21873635
RGD PMID:23636947, PMID:21873635 MGI:MGI:5532638, RGD:13792537 NCBI chr 2:198,312,428...198,317,180
Ensembl chr 2:198,312,428...198,317,180
JBrowse link
G Slc39a5 solute carrier family 39 member 5 ISO (MGI:MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:MGI:5532638 NCBI chr 7:2,813,875...2,819,917
Ensembl chr 7:2,813,875...2,819,299
JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 ISO (MGI:MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:MGI:5532638 NCBI chr 1:101,367,470...101,388,153
Ensembl chr 1:101,367,471...101,388,129
JBrowse link
G Snw1 SNW domain containing 1 ISO (PMID:12840015) RGD PMID:12840015 NCBI chr 6:111,483,698...111,507,782
Ensembl chr 6:111,483,703...111,507,782
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 ISO
ISS
(PMID:20123736)
GO_REF:0000024
RGD
UniProt
PMID:20123736 GO_REF:0000024 NCBI chr 5:144,178,248...144,221,318
Ensembl chr 5:144,179,023...144,221,263
JBrowse link
G Tra2a transformer 2 alpha homolog ISO
IBA
(MGI:MGI:5304203|PMID:22194695)
PMID:21873635
RGD PMID:22194695, PMID:21873635 MGI:MGI:5304203, RGD:13792537 NCBI chr 4:78,905,380...78,924,203
Ensembl chr 4:78,905,380...78,924,181
JBrowse link
G Tra2b transformer 2 beta homolog ISO
IBA
ISS
MGI:MGI:2176173|MGI:MGI:4450919 (MGI:MGI:5304203|PMID:22194695)
PMID:21873635
GO_REF:0000024
(PMID:15009664)
RGD
UniProt
PMID:15009664, PMID:22194695, PMID:21873635 GO_REF:0000024, MGI:MGI:5304203, RGD:13792537 NCBI chr11:82,373,828...82,392,208
Ensembl chr11:82,373,870...82,392,083
JBrowse link
G Zfp64 zinc finger protein 64 ISO (MGI:MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:MGI:5532638 NCBI chr 3:165,713,070...165,741,932
Ensembl chr 3:165,713,020...165,741,967
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    positive regulation of biological process 6667
      positive regulation of metabolic process 4083
        positive regulation of macromolecule metabolic process 3765
          positive regulation of gene expression 2524
            positive regulation of RNA splicing 47
              positive regulation of mRNA splicing, via spliceosome + 28
Path 2
Term Annotations click to browse term
  biological_process 20017
    metabolic process 12256
      cellular metabolic process 11064
        cellular aromatic compound metabolic process 5708
          nucleobase-containing compound metabolic process 5483
            nucleic acid metabolic process 4980
              RNA metabolic process 4470
                RNA processing 925
                  RNA splicing 395
                    regulation of RNA splicing 173
                      positive regulation of RNA splicing 47
                        positive regulation of mRNA splicing, via spliceosome + 28
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.