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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of histone ubiquitination
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Accession:GO:0033182 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the addition of a ubiquitin group to a histone protein.


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regulation of histone ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1600115
RGD:1624291
G Ube2n ubiquitin-conjugating enzyme E2N JBrowse link 7 36,610,147 36,640,190 RGD:1624291
negative regulation of histone H2A K63-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 JBrowse link 1 222,451,674 222,459,952 RGD:1624291
RGD:13792537
RGD:1600115
G Otub2 OTU deubiquitinase, ubiquitin aldehyde binding 2 JBrowse link 6 127,282,445 127,301,086 RGD:13792537
G Trip12 thyroid hormone receptor interactor 12 JBrowse link 9 92,305,059 92,435,388 RGD:1600115
RGD:13792537
RGD:1624291
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 JBrowse link 7
7
76,789,110
76,839,661
76,835,517
76,907,441
RGD:1600115
RGD:13792537
RGD:1624291
positive regulation of histone H2B ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdk9 cyclin-dependent kinase 9 JBrowse link 3 11,742,269 11,747,117 RGD:1624291
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component JBrowse link 1 175,839,140 175,869,167 RGD:1624291
G Rnf20 ring finger protein 20 JBrowse link 5 64,892,996 64,920,397 RGD:1624291
G Rnf40 ring finger protein 40 JBrowse link 1 199,037,472 199,052,823 RGD:1624291
positive regulation of histone ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kdm1a lysine demethylase 1A JBrowse link 5 154,909,003 154,965,171 RGD:1624291
G Kdm2a lysine demethylase 2A JBrowse link 1 219,566,130 219,642,294 RGD:1624291
regulation of histone H2B conserved C-terminal lysine ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wdr70 WD repeat domain 70 JBrowse link 2 56,944,462 57,196,522 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19676
    cellular process 18449
      cellular component organization or biogenesis 6664
        cellular component organization 6424
          chromatin organization 830
            regulation of chromatin organization 222
              regulation of histone modification 173
                regulation of histone ubiquitination 13
                  negative regulation of histone ubiquitination + 4
                  positive regulation of histone ubiquitination + 6
                  regulation of histone H2A K63-linked ubiquitination + 4
                  regulation of histone H2B ubiquitination + 5
Path 2
Term Annotations click to browse term
  biological_process 19676
    metabolic process 11952
      organic substance metabolic process 11358
        macromolecule metabolic process 9814
          protein metabolic process 6075
            cellular protein metabolic process 5412
              cellular protein modification process 3895
                protein modification by small protein conjugation or removal 932
                  protein modification by small protein conjugation 798
                    protein ubiquitination 751
                      regulation of protein ubiquitination 213
                        regulation of histone ubiquitination 13
                          negative regulation of histone ubiquitination + 4
                          positive regulation of histone ubiquitination + 6
                          regulation of histone H2A K63-linked ubiquitination + 4
                          regulation of histone H2B ubiquitination + 5
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.