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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of nuclear cell cycle DNA replication
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Accession:GO:0033262 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of The DNA-dependent DNA replication that occurs in the nucleus of eukaryotic organisms as part of the cell cycle.
Synonyms:exact_synonym: regulation of DNA replication involved in S phase
 related_synonym: regulation of DNA replication during S phase


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regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase ISO (PMID:19734146) RGD PMID:19734146 NCBI chr 4:155,359,909...155,371,104
Ensembl chr 4:155,359,921...155,369,671
JBrowse link
G Cdt1 chromatin licensing and DNA replication factor 1 ISO (MGI:2159541|PMID:11850834) RGD PMID:11850834 MGI:2159541 NCBI chr19:55,381,565...55,386,511
Ensembl chr19:55,381,565...55,386,511
JBrowse link
G Dach1 dachshund family transcription factor 1 ISO (MGI:5619482|PMID:16980615) RGD PMID:16980615 MGI:5619482 NCBI chr15:82,095,003...82,482,272
Ensembl chr15:82,099,159...82,482,009
JBrowse link
G Ilkap ILK associated serine/threonine phosphatase IDA RGD PMID:9857069 RGD:632254 NCBI chr 9:98,514,599...98,536,586
Ensembl chr 9:98,514,584...98,536,581
JBrowse link
G Nuggc nuclear GTPase, germinal center associated ISO (PMID:19734146) RGD PMID:19734146 NCBI chr15:49,011,951...49,055,246
Ensembl chr15:49,010,492...49,055,237
JBrowse link
positive regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 Fibroblast growth factor receptor 1 IEA
ISO
GO_REF:0000107
(MGI:79015|PMID:2161540)
Ensembl
RGD
PMID:2161540 GO_REF:0000107, MGI:79015 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
positive regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler IEA
ISO
ISS
GO_REF:0000107
(MGI:5568153|PMID:24651726)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24651726 GO_REF:0000024, GO_REF:0000107, MGI:5568153 NCBI chr  X:76,820,110...76,979,155
Ensembl chr  X:76,692,970...76,708,878
Ensembl chr  X:76,692,970...76,708,878
JBrowse link
G Cdc7 cell division cycle 7 ISO (PMID:15668232) RGD PMID:15668232 NCBI chr14:3,826,658...3,846,891
Ensembl chr14:3,826,659...3,846,891
JBrowse link
G Dbf4 DBF4 zinc finger IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:22,898,527...22,914,091
Ensembl chr 4:22,898,527...22,914,177
JBrowse link
G Dbf4b DBF4 zinc finger B ISO (PMID:15668232) RGD PMID:15668232 NCBI chr10:90,710,468...90,723,313 JBrowse link
G Ino80 INO80 complex ATPase subunit ISO (PMID:20237820) RGD PMID:20237820 NCBI chr 3:111,186,371...111,266,542
Ensembl chr 3:111,187,711...111,266,542
JBrowse link
G Wiz WIZ zinc finger ISO (PMID:23545495) RGD PMID:23545495 NCBI chr 7:14,374,358...14,402,647
Ensembl chr 7:14,374,358...14,402,010
JBrowse link
regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zmpste24 zinc metallopeptidase STE24 ISO MGI:2180033 (MGI:3583382|PMID:15980864) RGD PMID:15980864 MGI:3583382 NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541
JBrowse link
signal transduction involved in intra-S DNA damage checkpoint term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek2 checkpoint kinase 2 ISO (PMID:11298456) RGD PMID:11298456 NCBI chr12:51,845,574...51,878,098
Ensembl chr12:51,845,796...51,877,624
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cell cycle process 1210
        regulation of cell cycle process 623
          regulation of nuclear cell cycle DNA replication 14
            negative regulation of nuclear cell cycle DNA replication + 1
            positive regulation of nuclear cell cycle DNA replication + 7
            regulation of initiation of premeiotic DNA replication + 0
            regulation of mitotic cell cycle DNA replication + 3
Path 2
Term Annotations click to browse term
  biological_process 20020
    metabolic process 12263
      biosynthetic process 6222
        organic substance biosynthetic process 6117
          macromolecule biosynthetic process 5154
            cellular macromolecule biosynthetic process 5072
              DNA replication 256
                DNA-dependent DNA replication 153
                  cell cycle DNA replication 42
                    nuclear DNA replication 37
                      regulation of nuclear cell cycle DNA replication 14
                        negative regulation of nuclear cell cycle DNA replication + 1
                        positive regulation of nuclear cell cycle DNA replication + 7
                        regulation of initiation of premeiotic DNA replication + 0
                        regulation of mitotic cell cycle DNA replication + 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.