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ONTOLOGY REPORT - ANNOTATIONS


Term:host cell part
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Accession:GO:0033643 term browser browse the term
Definition:Any constituent part of a host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Comment:Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.


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host cell cytoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PF4 platelet factor 4 JBrowse link 4 50,208,806 50,210,570 RGD:9068941
host cell mitochondrial intermembrane space term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC100988585 transmembrane protein 220 JBrowse link 17 40,923,397 40,973,382 RGD:9068941
host cell perinuclear region of cytoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LMAN1 lectin, mannose binding 1 JBrowse link 18 52,722,735 52,754,013 RGD:9068941
host cell PML body term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CNOT7 CCR4-NOT transcription complex subunit 7 JBrowse link 8 16,439,014 16,459,636 RGD:9068941
host cell presynaptic membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PI4K2A phosphatidylinositol 4-kinase type 2 alpha JBrowse link 10 94,261,096 94,293,358 RGD:9068941
host cell surface term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AXL AXL receptor tyrosine kinase JBrowse link 19 38,211,555 38,254,464 RGD:9068941
host cell viral assembly compartment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BICD1 BICD cargo adaptor 1 JBrowse link 12 53,838,986 54,118,340 RGD:9068941
symbiont-containing vacuole term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AQP1 aquaporin 1 (Colton blood group) JBrowse link 7 31,524,933 31,538,602 RGD:9068941
G RAB29 RAB29, member RAS oncogene family JBrowse link 1 181,377,018 181,384,496 RGD:9068941
symbiont-containing vacuole membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AQP1 aquaporin 1 (Colton blood group) JBrowse link 7 31,524,933 31,538,602 RGD:9068941
G GBP2 guanylate binding protein 2 JBrowse link 1 91,816,602 91,836,594 RGD:9068941
G GBP4 guanylate binding protein 4 JBrowse link 1 91,892,368 91,910,048 RGD:9068941
G GBP6 guanylate binding protein family member 6 JBrowse link 1 92,040,822 92,063,571 RGD:9068941
G GBP7 guanylate binding protein 7 JBrowse link 1 91,841,867 91,886,638 RGD:9068941
G PF4 platelet factor 4 JBrowse link 4 50,208,806 50,210,570 RGD:9068941
viral integration complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TOP2A DNA topoisomerase II alpha JBrowse link 17 16,872,169 16,901,605 RGD:9068941
G TOP2B DNA topoisomerase II beta JBrowse link 3 25,499,239 25,566,029 RGD:9068941
viral replication complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FMR1 FMRP translational regulator 1 JBrowse link X 136,937,889 136,976,828 RGD:9068941
G MOV10 Mov10 RISC complex RNA helicase JBrowse link 1 115,327,051 115,353,483 RGD:9068941
G PI4KA phosphatidylinositol 4-kinase alpha JBrowse link 22 2,931,523 3,082,475 RGD:9068941
G SHFL shiftless antiviral inhibitor of ribosomal frameshifting JBrowse link 19 9,634,718 9,641,824 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12608
    cellular anatomical entity 12425
      host cellular component 19
        host cell part 19
          host caveola 0
          host cell envelope + 0
          host cell junction + 0
          host cell membrane + 1
          host cell membrane pore complex 0
          host cell periphery 0
          host cell periplasmic space 0
          host cell postsynaptic membrane 0
          host cell presynaptic membrane 1
          host cell projection + 0
          host cell surface 1
          host cell synapse + 1
          host cell wall 0
          host intracellular part + 17
          host intracellular region + 17
          host peribacteroid fluid 0
          host peribacteroid membrane 0
          integral to membrane of host cell + 0
          pathogen-containing vacuole + 0
          symbiont-containing vacuolar membrane network 0
          symbiont-containing vacuolar space 0
          symbiont-containing vacuole membrane + 6
          viral factory + 1
Path 2
Term Annotations click to browse term
  cellular_component 12608
    cellular anatomical entity 12425
      host cellular component 19
        host cell 19
          host cell part 19
            host caveola 0
            host cell envelope + 0
            host cell junction + 0
            host cell membrane + 1
            host cell membrane pore complex 0
            host cell periphery 0
            host cell periplasmic space 0
            host cell postsynaptic membrane 0
            host cell presynaptic membrane 1
            host cell projection + 0
            host cell surface 1
            host cell synapse + 1
            host cell wall 0
            host intracellular part + 17
            host intracellular region + 17
            host peribacteroid fluid 0
            host peribacteroid membrane 0
            integral to membrane of host cell + 0
            pathogen-containing vacuole + 0
            symbiont-containing vacuolar membrane network 0
            symbiont-containing vacuolar space 0
            symbiont-containing vacuole membrane + 6
            viral factory + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.