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ONTOLOGY REPORT - ANNOTATIONS


Term:host cell part
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Accession:GO:0033643 term browser browse the term
Definition:Any constituent part of a host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Comment:Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.


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host cell mitochondrial intermembrane space term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC102030058 protein SCO1 homolog, mitochondrial JBrowse link NW_004955467 6,519,873 6,535,321 RGD:9068941
host cell perinuclear region of cytoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lman1 lectin, mannose binding 1 JBrowse link NW_004955402 43,465,556 43,495,789 RGD:9068941
host cell PML body term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cnot7 CCR4-NOT transcription complex subunit 7 JBrowse link NW_004955463 285,228 306,077 RGD:9068941
host cell presynaptic membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha JBrowse link NW_004955507 3,729,947 3,761,703 RGD:9068941
host cell surface term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Axl AXL receptor tyrosine kinase JBrowse link NW_004955555 189,445 218,509 RGD:9068941
host cell viral assembly compartment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bicd1 BICD cargo adaptor 1 JBrowse link NW_004955505 3,330,933 3,544,752 RGD:9068941
symbiont-containing vacuole term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aqp1 aquaporin 1 (Colton blood group) JBrowse link NW_004955410 32,066,196 32,078,661 RGD:9068941
G Rab29 RAB29, member RAS oncogene family JBrowse link NW_004955406 41,452,733 41,468,467 RGD:9068941
symbiont-containing vacuole membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aqp1 aquaporin 1 (Colton blood group) JBrowse link NW_004955410 32,066,196 32,078,661 RGD:9068941
viral integration complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Top2a DNA topoisomerase II alpha JBrowse link NW_004955451 14,928,273 14,964,855 RGD:9068941
G Top2b DNA topoisomerase II beta JBrowse link NW_004955430 17,457,603 17,523,115 RGD:9068941
viral replication complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fmr1 FMRP translational regulator 1 JBrowse link NW_004955498 566,741 594,837 RGD:9068941
G Mov10 Mov10 RISC complex RNA helicase JBrowse link NW_004955435 16,093,471 16,114,735 RGD:9068941
G Pi4ka phosphatidylinositol 4-kinase alpha JBrowse link NW_004955442 19,446,955 19,594,790 RGD:9068941
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting JBrowse link NW_004955495 1,431,677 1,437,035 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 11979
    cellular anatomical entity 11811
      host cellular component 14
        host cell part 14
          host caveola 0
          host cell envelope + 0
          host cell junction + 0
          host cell membrane + 1
          host cell membrane pore complex 0
          host cell periphery 0
          host cell periplasmic space 0
          host cell postsynaptic membrane 0
          host cell presynaptic membrane 1
          host cell projection + 0
          host cell surface 1
          host cell synapse + 1
          host cell wall 0
          host intracellular part + 12
          host intracellular region + 12
          host peribacteroid fluid 0
          host peribacteroid membrane 0
          integral to membrane of host cell + 0
          pathogen-containing vacuole + 0
          symbiont-containing vacuolar membrane network 0
          symbiont-containing vacuolar space 0
          symbiont-containing vacuole membrane + 1
          viral factory + 1
Path 2
Term Annotations click to browse term
  cellular_component 11979
    cellular anatomical entity 11811
      host cellular component 14
        host cell 14
          host cell part 14
            host caveola 0
            host cell envelope + 0
            host cell junction + 0
            host cell membrane + 1
            host cell membrane pore complex 0
            host cell periphery 0
            host cell periplasmic space 0
            host cell postsynaptic membrane 0
            host cell presynaptic membrane 1
            host cell projection + 0
            host cell surface 1
            host cell synapse + 1
            host cell wall 0
            host intracellular part + 12
            host intracellular region + 12
            host peribacteroid fluid 0
            host peribacteroid membrane 0
            integral to membrane of host cell + 0
            pathogen-containing vacuole + 0
            symbiont-containing vacuolar membrane network 0
            symbiont-containing vacuolar space 0
            symbiont-containing vacuole membrane + 1
            viral factory + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.