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ONTOLOGY REPORT - ANNOTATIONS


Term:host intracellular membrane-bounded organelle
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Accession:GO:0033648 term browser browse the term
Definition:Organized structure of distinctive morphology and function, as found in host cells, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Synonyms:exact_synonym: host intracellular membrane-enclosed organelle


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host cell mitochondrial intermembrane space term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SCO1 synthesis of cytochrome C oxidase 1 JBrowse link 12 55,406,730 55,424,120 RGD:14298760
host cell nucleus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BACH1 BTB domain and CNC homolog 1 JBrowse link 13 192,656,289 192,697,536 RGD:14298760
G BACH2 BTB domain and CNC homolog 2 JBrowse link 1 57,881,203 58,281,740 RGD:14298760
G BAZ2A bromodomain adjacent to zinc finger domain 2A JBrowse link 5 21,932,527 21,983,033 RGD:14298760
G BAZ2B bromodomain adjacent to zinc finger domain 2B JBrowse link 15 66,254,888 66,411,261 RGD:14298760
G CCNA1 cyclin A1 JBrowse link 11 12,396,149 12,405,357 RGD:14298760
G CCNB1 cyclin B1 JBrowse link 16 47,338,239 47,348,385 RGD:14298760
G CCNB2 cyclin B2 JBrowse link 1 112,907,047 112,942,218 RGD:14298760
G CCNB3 cyclin B3 JBrowse link X 43,922,729 43,988,939 RGD:14298760
G CCNC cyclin C JBrowse link 1 66,472,622 66,499,754 RGD:14298760
G CCND1 cyclin D1 JBrowse link 2 3,621,242 3,633,380 RGD:14298760
G CCND2 cyclin D2 JBrowse link 5 66,092,483 66,114,575 RGD:14298760
G CCND3 cyclin D3 JBrowse link 7 37,087,336 37,182,462 RGD:14298760
G CCNE1 cyclin E1 JBrowse link 6 39,919,541 39,933,224 RGD:14298760
G CCNE2 cyclin E2 JBrowse link 4 41,802,090 41,821,870 RGD:14298760
G CCNF cyclin F JBrowse link 3 39,585,597 39,603,088 RGD:14298760
G CCNH cyclin H JBrowse link 2 94,980,938 95,019,053 RGD:14298760
G CCNJ cyclin J JBrowse link 14 107,518,663 107,542,767 RGD:14298760
G CCNJL cyclin J like JBrowse link 16 63,226,940 63,290,296 RGD:14298760
G CCNK cyclin K JBrowse link 7 120,487,140 120,514,223 RGD:14298760
G CCNL1 cyclin L1 JBrowse link 13 96,984,542 97,004,401 RGD:14298760
G CCNL2 cyclin L2 JBrowse link 6 63,659,053 63,668,077 RGD:14298760
G CCNO cyclin O JBrowse link 16 34,387,179 34,390,611 RGD:14298760
G CCNQ cyclin Q JBrowse link X 124,361,003 124,370,072 RGD:14298760
G CCNT1 cyclin T1 JBrowse link 5 14,768,423 14,808,424 RGD:14298760
G CCNT2 cyclin T2 JBrowse link 15 16,974,364 17,021,293 RGD:14298760
G CNOT2 CCR4-NOT transcription complex subunit 2 JBrowse link 5 34,470,911 34,548,968 RGD:14298760
G CNOT3 CCR4-NOT transcription complex subunit 3 JBrowse link 6 55,975,628 55,993,140 RGD:14298760
G EHF ETS homologous factor JBrowse link 2 26,287,244 26,340,222 RGD:14298760
G ELF3 E74 like ETS transcription factor 3 JBrowse link 10 24,237,852 24,242,266 RGD:14298760
G ELF5 E74 like ETS transcription factor 5 JBrowse link 2 26,443,979 26,486,802 RGD:14298760
G ERG ETS transcription factor ERG JBrowse link 13 201,999,237 202,302,572 RGD:14298760
G ETS1 ETS proto-oncogene 1, transcription factor JBrowse link 9 55,377,264 55,512,180 RGD:14298760
G ETS2 ETS proto-oncogene 2, transcription factor JBrowse link 13 202,464,341 202,483,534 RGD:14298760
G ETV6 ETS variant transcription factor 6 JBrowse link 5 60,523,530 60,776,792 RGD:14298760
G ETV7 ETS variant transcription factor 7 JBrowse link 7 32,087,422 32,109,966 RGD:14298760
G FAM120A family with sequence similarity 120A JBrowse link 3 42,861,594 42,974,874 RGD:14298760
G FAM120B family with sequence similarity 120B JBrowse link 1 121,143 186,783 RGD:14298760
G FAM120C family with sequence similarity 120C JBrowse link X 46,777,904 46,904,232 RGD:14298760
G FLI1 Fli-1 proto-oncogene, ETS transcription factor JBrowse link 9 55,612,905 55,749,784 RGD:14298760
G GABPA GA binding protein transcription factor subunit alpha JBrowse link 13 189,289,513 189,327,501 RGD:14298760
G H1-3 H1.3 linker histone, cluster member RGD:14298760
G H1-4 H1.4 linker histone, cluster member RGD:14298760
G H1-6 H1.6 linker histone, cluster member JBrowse link 7 20,774,135 20,777,244 RGD:14298760
G H1FOO oocyte-specific H1 histone JBrowse link 13 68,921,491 68,943,061 RGD:14298760
G HP1BP3 heterochromatin protein 1 binding protein 3 JBrowse link 6 78,975,551 79,007,921 RGD:14298760
G HSF1 heat shock transcription factor 1 JBrowse link 4 463,531 486,483 RGD:14298760
G HSF2 heat shock transcription factor 2 JBrowse link 1 40,147,267 40,180,308 RGD:14298760
G HSF5 heat shock transcription factor 5 JBrowse link 12 34,696,231 34,744,536 RGD:14298760
G KAT6B lysine acetyltransferase 6B JBrowse link 14 77,390,790 77,597,674 RGD:14298760
G KPNA1 karyopherin subunit alpha 1 JBrowse link 13 138,045,083 138,100,830 RGD:14298760
G KPNA2 karyopherin subunit alpha 2 JBrowse link 12 14,283,092 14,296,749 RGD:14298760
G KPNA3 karyopherin subunit alpha 3 JBrowse link 11 17,948,210 18,033,818 RGD:14298760
G KPNA4 karyopherin subunit alpha 4 JBrowse link 13 100,185,081 100,253,077 RGD:14298760
G KPNA5 karyopherin subunit alpha 5 JBrowse link 1 44,900,495 44,941,219 RGD:14298760
G KPNA6 karyopherin subunit alpha 6 JBrowse link 6 88,611,128 88,656,281 RGD:14298760
G KPNA7 karyopherin subunit alpha 7 JBrowse link 3 6,167,382 6,201,282 RGD:14298760
G LOC100153087 nuclear RNA export factor 2 JBrowse link X 83,338,757 83,361,973 RGD:14298760
G LOC100158117 histone H4 JBrowse link 7 21,595,863 21,596,243 RGD:14298760
G LOC100510904 histone H1.0 JBrowse link 5 10,038,944 10,041,242 RGD:14298760
G LOC100523672 heat shock factor protein 4 JBrowse link 6 27,808,658 27,818,256 RGD:14298760
G LOC102164431 nuclear RNA export factor 3-like JBrowse link X 83,980,605 83,989,335 RGD:14298760
G LOC110257686 nuclear RNA export factor 3-like JBrowse link X 84,065,215 84,073,826 RGD:14298760
G LOC110257871 heat shock transcription factor, Y-linked-like JBrowse link Y 22,138,661 22,140,292 RGD:14298760
G LOC110257872 heat shock transcription factor, Y-linked-like JBrowse link Y 23,675,429 23,677,060 RGD:14298760
G LOC110257873 heat shock transcription factor, Y-linked-like JBrowse link Y 20,442,637 20,444,449 RGD:14298760
G LOC110257882 heat shock transcription factor, Y-linked-like JBrowse link Y 23,897,735 23,899,366 RGD:14298760
G LOC110257886 heat shock transcription factor, Y-linked-like JBrowse link Y 21,694,508 21,696,139 RGD:14298760
G LOC110257887 heat shock transcription factor, Y-linked-like JBrowse link Y 23,944,263 23,945,894 RGD:14298760
G LOC110257888 heat shock transcription factor, Y-linked-like JBrowse link Y 19,929,688 19,931,319 RGD:14298760
G LOC110257891 heat shock transcription factor, Y-linked-like JBrowse link Y 22,254,072 22,255,703 RGD:14298760
G LOC110257895 heat shock transcription factor, Y-linked-like JBrowse link Y 20,902,502 20,904,133 RGD:14298760
G LOC110257899 heat shock transcription factor, Y-linked-like JBrowse link Y 21,378,920 21,380,551 RGD:14298760
G LOC110257904 heat shock transcription factor, Y-linked-like JBrowse link Y 23,367,322 23,368,953 RGD:14298760
G LOC110257906 heat shock transcription factor, Y-linked-like JBrowse link Y 20,710,734 20,712,365 RGD:14298760
G LOC110257907 heat shock transcription factor, Y-linked-like JBrowse link Y 20,115,627 20,117,258 RGD:14298760
G LOC110257908 heat shock transcription factor, Y-linked-like JBrowse link Y 20,157,020 20,158,651 RGD:14298760
G LOC110257913 heat shock transcription factor, Y-linked-like JBrowse link Y 19,637,456 19,639,087 RGD:14298760
G LOC110257920 heat shock transcription factor, Y-linked-like JBrowse link Y 22,859,918 22,861,549 RGD:14298760
G LOC110257928 heat shock transcription factor, Y-linked-like JBrowse link Y 21,825,710 21,827,507 RGD:14298760
G LOC110257946 heat shock transcription factor, Y-linked-like JBrowse link Y 19,541,187 19,542,818 RGD:14298760
G LOC110257950 heat shock transcription factor, Y-linked-like JBrowse link Y 20,259,637 20,261,268 RGD:14298760
G LOC110257954 heat shock transcription factor, Y-linked-like JBrowse link Y 21,301,746 21,303,377 RGD:14298760
G LOC110257960 heat shock transcription factor, Y-linked-like JBrowse link Y 22,640,235 22,641,866 RGD:14298760
G LOC110259300 G1/S-specific cyclin-E1-like JBrowse link 2 47,631,998 47,634,587 RGD:14298760
G MAF MAF bZIP transcription factor JBrowse link 6 8,468,736 8,910,012 RGD:14298760
G MAFA MAF bZIP transcription factor A JBrowse link 4 1,090,018 1,093,600 RGD:14298760
G MAFF MAF bZIP transcription factor F JBrowse link 5 9,683,651 9,696,128 RGD:14298760
G MAFG MAF bZIP transcription factor G JBrowse link 12 1,069,074 1,078,081 RGD:14298760
G MAFK MAF bZIP transcription factor K JBrowse link 3 1,023,366 1,034,855 RGD:14298760
G MBD1 methyl-CpG binding domain protein 1 JBrowse link 1 99,848,193 99,917,347 RGD:14298760
G MBD2 methyl-CpG binding domain protein 2 JBrowse link 1 103,683,077 103,768,372 RGD:14298760
G MBD3 methyl-CpG binding domain protein 3 JBrowse link 2 76,913,880 76,923,435 RGD:14298760
G MBD4 methyl-CpG binding domain 4, DNA glycosylase JBrowse link 13 68,816,677 68,828,559 RGD:14298760
G MBD5 methyl-CpG binding domain protein 5 JBrowse link 15 3,649,859 4,096,459 RGD:14298760
G MBD6 methyl-CpG binding domain protein 6 JBrowse link 5 22,790,220 22,799,131 RGD:14298760
G MECP2 methyl-CpG binding protein 2 JBrowse link X 124,735,523 124,789,063 RGD:14298760
G MRTFA myocardin related transcription factor A JBrowse link 5 7,751,350 7,975,927 RGD:14298760
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 4 12,455,141 12,460,360 RGD:14298760
G MYCL MYCL proto-oncogene, bHLH transcription factor JBrowse link 6 95,696,086 95,702,627 RGD:14298760
G MYCN MYCN proto-oncogene, bHLH transcription factor JBrowse link 3 121,543,201 121,549,678 RGD:14298760
G NFE2 nuclear factor, erythroid 2 JBrowse link 5 19,494,672 19,501,810 RGD:14298760
G NFE2L1 nuclear factor, erythroid 2 like 1 JBrowse link 12 24,303,381 24,316,765 RGD:14298760
G NFE2L2 nuclear factor, erythroid 2 like 2 JBrowse link 15 82,967,485 83,146,185 RGD:14298760
G NFE2L3 nuclear factor, erythroid 2 like 3 JBrowse link 18 46,213,392 46,250,309 RGD:14298760
G NFKB1 nuclear factor kappa B subunit 1 JBrowse link 8 118,391,010 118,478,927 RGD:14298760
G NFKB2 nuclear factor kappa B subunit 2 JBrowse link 14 113,406,412 113,414,177 RGD:14298760
G NR1H4 nuclear receptor subfamily 1 group H member 4 JBrowse link 5 83,607,222 83,732,668 RGD:14298760
G NR1I2 nuclear receptor subfamily 1 group I member 2 JBrowse link 13 140,373,571 140,406,129 RGD:14298760
G NRL neural retina leucine zipper JBrowse link 7 75,199,048 75,211,655 RGD:14298760
G NXF1 nuclear RNA export factor 1 JBrowse link 2 8,968,659 8,983,276 RGD:14298760
G POLD4 DNA polymerase delta 4, accessory subunit JBrowse link 2 5,160,906 5,162,753 RGD:14298760
G POLR1A RNA polymerase I subunit A JBrowse link 3 58,670,377 58,750,441 RGD:14298760
G POLR1E RNA polymerase I subunit E JBrowse link 1 238,197,659 238,219,475 RGD:14298760
G POLR2E RNA polymerase II, I and III subunit E JBrowse link 2 77,330,755 77,341,910 RGD:14298760
G RAD1 RAD1 checkpoint DNA exonuclease JBrowse link 16 20,491,851 20,512,198 RGD:14298760
G RAD17 RAD17 checkpoint clamp loader component JBrowse link 16 47,499,669 47,529,703 RGD:14298760
G RAD23A RAD23 homolog A, nucleotide excision repair protein JBrowse link 2 66,090,089 66,096,477 RGD:14298760
G RAD23B RAD23 homolog B, nucleotide excision repair protein JBrowse link 1 248,447,991 248,493,651 RGD:14298760
G REL REL proto-oncogene, NF-kB subunit JBrowse link 3 80,861,862 80,912,233 RGD:14298760
G RELA RELA proto-oncogene, NF-kB subunit JBrowse link 2 6,594,869 6,602,684 RGD:14298760
G RELB RELB proto-oncogene, NF-kB subunit JBrowse link 6 51,444,670 51,480,350 RGD:14298760
G RNGTT RNA guanylyltransferase and 5'-phosphatase JBrowse link 1 56,852,864 57,061,985 RGD:14298760
G RNMT RNA guanine-7 methyltransferase JBrowse link 6 96,338,283 96,362,814 RGD:14298760
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 JBrowse link 4 98,259,801 98,293,238 RGD:14298760
G SETDB2 SET domain bifurcated histone lysine methyltransferase 2 JBrowse link 11 18,252,525 18,298,234 RGD:14298760
G SFMBT2 Scm like with four mbt domains 2 JBrowse link 10 63,877,033 64,070,867 RGD:14298760
G SHPRH SNF2 histone linker PHD RING helicase JBrowse link 1 19,612,915 19,697,444 RGD:14298760
G SIAH1 siah E3 ubiquitin protein ligase 1 JBrowse link 6 36,337,770 36,365,784 RGD:14298760
G SIAH2 siah E3 ubiquitin protein ligase 2 JBrowse link 13 90,951,798 90,971,538 RGD:14298760
G SIAH3 siah E3 ubiquitin protein ligase family member 3 JBrowse link 11 21,500,605 21,562,301 RGD:14298760
G SPDEF SAM pointed domain containing ETS transcription factor JBrowse link 7 30,515,925 30,538,095 RGD:14298760
G THRA thyroid hormone receptor alpha JBrowse link 12 22,270,506 22,296,684 RGD:14298760
G THRB thyroid hormone receptor beta JBrowse link 13 10,900,716 11,360,587 RGD:14298760
G XPA XPA, DNA damage recognition and repair factor JBrowse link 1 239,532,331 239,568,589 RGD:14298760
G ZC3HC1 zinc finger C3HC-type containing 1 JBrowse link 18 18,740,817 18,761,515 RGD:14298760
host cell PML body term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CNOT7 CCR4-NOT transcription complex subunit 7 JBrowse link 17 4,934,379 4,950,093 RGD:14298760
host cell viral assembly compartment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BICD1 BICD cargo adaptor 1 JBrowse link 5 41,897,611 42,143,668 RGD:9068941
viral integration complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TOP2A DNA topoisomerase II alpha JBrowse link 12 22,001,300 22,028,452 RGD:14298760
G TOP2B DNA topoisomerase II beta JBrowse link 13 12,507,738 12,575,042 RGD:14298760
viral replication complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FMR1 FMRP translational regulator 1 JBrowse link X 120,361,232 120,400,282 RGD:14298760
G MOV10 Mov10 RISC complex RNA helicase JBrowse link 4 107,738,089 107,763,873 RGD:14298760
G PI4KA phosphatidylinositol 4-kinase alpha JBrowse link 14 50,390,416 50,491,983 RGD:14298760
G SHFL shiftless antiviral inhibitor of ribosomal frameshifting JBrowse link 2 68,942,246 68,947,107 RGD:14298760

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 16659
    cellular anatomical entity 16497
      host cellular component 157
        host cell part 156
          host intracellular part 154
            host intracellular organelle 144
              host intracellular membrane-bounded organelle 144
                host cell cytoplasmic vesicle + 0
                host cell endoplasmic reticulum + 0
                host cell endoplasmic reticulum-Golgi intermediate compartment + 0
                host cell endosome + 0
                host cell lysosome + 0
                host cell mitochondrion + 1
                host cell nucleus + 142
                host cell peroxisome 0
                host cell plastid + 0
                host cell viral assembly compartment 1
                host symbiosome + 0
Path 2
Term Annotations click to browse term
  cellular_component 16659
    cellular anatomical entity 16497
      host cellular component 157
        host cell 157
          host cell part 156
            host intracellular region 154
              host intracellular part 154
                host intracellular organelle 144
                  host intracellular membrane-bounded organelle 144
                    host cell cytoplasmic vesicle + 0
                    host cell endoplasmic reticulum + 0
                    host cell endoplasmic reticulum-Golgi intermediate compartment + 0
                    host cell endosome + 0
                    host cell lysosome + 0
                    host cell mitochondrion + 1
                    host cell nucleus + 142
                    host cell peroxisome 0
                    host cell plastid + 0
                    host cell viral assembly compartment 1
                    host symbiosome + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.