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ONTOLOGY REPORT - ANNOTATIONS


Term:host cell cytoplasm part
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Accession:GO:0033655 term browser browse the term
Definition:Any constituent part of the host cell cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. The host is defined as the larger of the organisms involved in a symbiotic interaction.
Comment:Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.
Synonyms:broad_synonym: cytoplasm component


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host cell cytosol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Defb41 defensin beta 41 JBrowse link 15 46,179,787 46,182,308 RGD:1624291
host cell mitochondrial intermembrane space term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sco1 synthesis of cytochrome C oxidase 1 JBrowse link 10 53,595,854 53,608,437 RGD:1624291
host cell perinuclear region of cytoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lman1 lectin, mannose-binding, 1 JBrowse link 18 61,683,377 61,707,344 RGD:1600115
RGD:1624291
host cell viral assembly compartment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bicd1 BICD cargo adaptor 1 JBrowse link 4 184,018,845 184,167,628 RGD:1624291
symbiont-containing vacuole term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aqp1 aquaporin 1 JBrowse link 4 85,551,503 85,563,683 RGD:1624291
G Rab29 RAB29, member RAS oncogene family JBrowse link 13 48,644,575 48,650,229 RGD:1624291
symbiont-containing vacuole membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aqp1 aquaporin 1 JBrowse link 4 85,551,503 85,563,683 RGD:1624291
G Gbp1 guanylate binding protein 1 JBrowse link 2 248,343,334 248,423,402 RGD:1624291
G Gbp2 guanylate binding protein 2 JBrowse link 2 248,276,795 248,293,784 RGD:1624291
RGD:13792537
RGD:1600115
G Gbp4 guanylate binding protein 4 JBrowse link 2 248,249,232 248,263,104 RGD:13792537
RGD:1624291
G Gbp6 guanylate binding protein family member 6 JBrowse link 14 5,927,568 5,954,923 RGD:13792537
G LOC103690086 uncharacterized LOC103690086 JBrowse link 14 5,642,357 5,646,406 RGD:1624291
G LOC685067 similar to guanylate binding protein family, member 6 JBrowse link 2 248,215,324 248,241,278 RGD:13792537
G Pf4 platelet factor 4 JBrowse link 14 18,848,549 18,849,258 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20119
    cellular anatomical entity 19775
      host cellular component 159
        host cell part 158
          host intracellular part 156
            host cell cytoplasm part 13
              Maurer's cleft 0
              cytoplasmic viral factory + 1
              double membrane vesicle viral factory lumen 0
              host cell Golgi apparatus + 0
              host cell cytoplasmic vesicle + 0
              host cell cytoplasmic vesicle membrane + 0
              host cell cytosol 1
              host cell endoplasmic reticulum + 0
              host cell endoplasmic reticulum lumen 0
              host cell endoplasmic reticulum-Golgi intermediate compartment + 0
              host cell endosome + 0
              host cell endosome lumen 0
              host cell lipid droplet 0
              host cell lysosome + 0
              host cell mitochondrial envelope + 1
              host cell mitochondrial intermembrane space 1
              host cell mitochondrion + 1
              host cell perinuclear region of cytoplasm 1
              host cell peroxisome 0
              host cell plastid + 0
              host symbiosome + 0
              host thylakoid + 0
              host thylakoid membrane + 0
              infected host cell surface knob 0
              symbiont-containing vacuole + 9
              tubovesicular membrane network 0
Path 2
Term Annotations click to browse term
  cellular_component 20119
    cellular anatomical entity 19775
      host cellular component 159
        host cell 159
          host cell part 158
            host intracellular region 156
              host intracellular part 156
                host cell cytoplasm 13
                  host cell cytoplasm part 13
                    Maurer's cleft 0
                    cytoplasmic viral factory + 1
                    double membrane vesicle viral factory lumen 0
                    host cell Golgi apparatus + 0
                    host cell cytoplasmic vesicle + 0
                    host cell cytoplasmic vesicle membrane + 0
                    host cell cytosol 1
                    host cell endoplasmic reticulum + 0
                    host cell endoplasmic reticulum lumen 0
                    host cell endoplasmic reticulum-Golgi intermediate compartment + 0
                    host cell endosome + 0
                    host cell endosome lumen 0
                    host cell lipid droplet 0
                    host cell lysosome + 0
                    host cell mitochondrial envelope + 1
                    host cell mitochondrial intermembrane space 1
                    host cell mitochondrion + 1
                    host cell perinuclear region of cytoplasm 1
                    host cell peroxisome 0
                    host cell plastid + 0
                    host symbiosome + 0
                    host thylakoid + 0
                    host thylakoid membrane + 0
                    infected host cell surface knob 0
                    symbiont-containing vacuole + 9
                    tubovesicular membrane network 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.