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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of cellular amide metabolic process
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Accession:GO:0034248 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving amides.
Synonyms:exact_synonym: regulation of amide metabolism


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3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DHX36 DEAH-box helicase 36 JBrowse link 23 48,404,351 48,456,360 RGD:13508589
G DND1 DND microRNA-mediated repression inhibitor 1 JBrowse link 2 35,825,154 35,827,913 RGD:13508589
G KHSRP KH-type splicing regulatory protein JBrowse link 20 53,746,656 53,755,388 RGD:13508589
G PLEKHN1 pleckstrin homology domain containing N1 JBrowse link 5 56,193,824 56,202,340 RGD:13508589
G RC3H1 ring finger and CCCH-type domains 1 JBrowse link 7 25,265,836 25,312,417 RGD:13508589
G TARDBP TAR DNA binding protein JBrowse link 2 84,987,752 84,998,136 RGD:13508589
G TRIM71 tripartite motif containing 71 JBrowse link 23 3,888,287 3,959,910 RGD:13508589
G UPF1 UPF1 RNA helicase and ATPase JBrowse link 20 44,234,411 44,271,129 RGD:13508589
G ZC3H12A zinc finger CCCH-type containing 12A JBrowse link 15 4,972,369 4,984,218 RGD:13508589
G ZFP36 ZFP36 ring finger protein JBrowse link 1 113,815,972 113,818,093 RGD:13508589
G ZFP36L1 ZFP36 ring finger protein like 1 JBrowse link 8 42,663,287 42,668,665 RGD:13508589
G ZFP36L2 ZFP36 ring finger protein like 2 JBrowse link 10 45,746,952 45,751,268 RGD:13508589
circadian regulation of translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HNRNPD heterogeneous nuclear ribonucleoprotein D JBrowse link 32 6,323,444 6,341,238 RGD:13508589
G PER1 period circadian regulator 1 JBrowse link 5 32,957,517 32,972,368 RGD:13508589
eiF2alpha phosphorylation in response to endoplasmic reticulum stress term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EIF2AK3 eukaryotic translation initiation factor 2 alpha kinase 3 JBrowse link 17 37,886,397 37,950,671 RGD:13508589
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 JBrowse link 30 7,144,727 7,248,014 RGD:13508589
miRNA mediated inhibition of translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AGO1 argonaute RISC component 1 JBrowse link 15 6,258,359 6,294,911 RGD:13508589
G AGO2 argonaute RISC catalytic component 2 JBrowse link 13 35,169,243 35,230,252 RGD:13508589
G AGO3 argonaute RISC catalytic component 3 JBrowse link 15 6,133,303 6,253,032 RGD:13508589
G AGO4 argonaute RISC component 4 JBrowse link 15 6,325,899 6,351,748 RGD:13508589
G EIF6 eukaryotic translation initiation factor 6 JBrowse link 24 24,259,623 24,266,453 RGD:13508589
G LOC610648 RNA-binding protein 14 JBrowse link 18 50,683,227 50,728,512 RGD:13508589
G STAT3 signal transducer and activator of transcription 3 JBrowse link 9 20,539,660 20,614,631 RGD:13508589
G TNRC6A trinucleotide repeat containing adaptor 6A JBrowse link 6 21,247,492 21,454,424 RGD:13508589
G TNRC6B trinucleotide repeat containing adaptor 6B JBrowse link 10 24,852,168 25,094,400 RGD:13508589
G TNRC6C trinucleotide repeat containing adaptor 6C JBrowse link 9 3,018,599 3,122,664 RGD:13508589
G TRIM71 tripartite motif containing 71 JBrowse link 23 3,888,287 3,959,910 RGD:13508589
G ZFP36 ZFP36 ring finger protein JBrowse link 1 113,815,972 113,818,093 RGD:13508589
mRNA destabilization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CNOT6L CCR4-NOT transcription complex subunit 6 like JBrowse link 32 2,192,800 2,305,526 RGD:13508589
G GIGYF2 GRB10 interacting GYF protein 2 JBrowse link 25 44,317,540 44,453,761 RGD:13508589
G METTL14 methyltransferase like 14 JBrowse link 32 37,653,163 37,679,577 RGD:13508589
G METTL16 methyltransferase like 16 JBrowse link 9 46,491,503 46,566,752 RGD:13508589
G PUM1 pumilio RNA binding family member 1 JBrowse link 2 69,907,655 70,044,055 RGD:13508589
G RIDA reactive intermediate imine deaminase A homolog JBrowse link 13 348,744 361,063 RGD:13508589
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 JBrowse link 2 71,760,232 71,791,420 RGD:13508589
negative regulation of amyloid-beta formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CLU clusterin JBrowse link 25 29,982,811 29,999,565 RGD:13508589
G GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 JBrowse link 9 5,235,377 5,250,982 RGD:13508589
G PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 JBrowse link 20 51,156,887 51,168,131 RGD:13508589
G SORL1 sortilin related receptor 1 JBrowse link 5 12,493,750 12,650,530 RGD:13508589
G SPON1 spondin 1 JBrowse link 21 36,778,435 37,030,042 RGD:13508589
negative regulation of ceramide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ORMDL1 ORMDL sphingolipid biosynthesis regulator 1 JBrowse link 37 509,592 521,511 RGD:13508589
G ORMDL2 ORMDL sphingolipid biosynthesis regulator 2 JBrowse link 10 203,750 206,247 RGD:13508589
G ORMDL3 ORMDL sphingolipid biosynthesis regulator 3 JBrowse link 9 22,594,425 22,601,108 RGD:13508589
G SPHK1 sphingosine kinase 1 JBrowse link 9 4,311,698 4,314,773 RGD:13508589
negative regulation of cytoplasmic translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CPEB1 cytoplasmic polyadenylation element binding protein 1 JBrowse link 3 54,405,140 54,499,614 RGD:13508589
G CPEB2 cytoplasmic polyadenylation element binding protein 2 JBrowse link 3 65,200,175 65,277,353 RGD:13508589
G CPEB3 cytoplasmic polyadenylation element binding protein 3 JBrowse link 28 6,523,894 6,724,010 RGD:13508589
G CPEB4 cytoplasmic polyadenylation element binding protein 4 JBrowse link 4 38,604,065 38,665,200 RGD:13508589
G UNK unk zinc finger JBrowse link 9 4,767,696 4,801,324 RGD:13508589
negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NCK1 NCK adaptor protein 1 JBrowse link 23 33,297,660 33,374,025 RGD:13508589
G NCK2 NCK adaptor protein 2 JBrowse link 10 37,584,351 37,734,388 RGD:13508589
G PPP1R15B protein phosphatase 1 regulatory subunit 15B JBrowse link 38 957,320 965,683 RGD:13508589
negative regulation of formation of translation preinitiation complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RPL13A ribosomal protein L13a JBrowse link 1 107,010,190 107,014,267 RGD:13508589
negative regulation of mitochondrial translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MALSU1 mitochondrial assembly of ribosomal large subunit 1 JBrowse link 14 36,959,667 36,968,903 RGD:13508589
negative regulation of pentose-phosphate shunt term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TP53 tumor protein p53 JBrowse link 5 32,561,406 32,565,149 RGD:13508589
negative regulation of translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CALR calreticulin JBrowse link 20 49,251,390 49,255,291 RGD:13508589
G CIRBP cold inducible RNA binding protein JBrowse link 20 57,521,609 57,526,526 RGD:13508589
G CNOT1 CCR4-NOT transcription complex subunit 1 JBrowse link 2 58,038,456 58,138,364 RGD:13508589
G CNOT10 CCR4-NOT transcription complex subunit 10 JBrowse link 23 3,984,505 4,058,649 RGD:13508589
G CNOT2 CCR4-NOT transcription complex subunit 2 JBrowse link 10 12,057,269 12,174,405 RGD:13508589
G CNOT3 CCR4-NOT transcription complex subunit 3 JBrowse link 1 103,057,392 103,070,612 RGD:13508589
G CNOT7 CCR4-NOT transcription complex subunit 7 JBrowse link 16 40,554,214 40,571,841 RGD:13508589
G CNOT8 CCR4-NOT transcription complex subunit 8 JBrowse link 4 54,935,476 54,956,000 RGD:13508589
G CNOT9 CCR4-NOT transcription complex subunit 9 JBrowse link 37 25,186,928 25,213,255 RGD:13508589
G DAPK1 death associated protein kinase 1 JBrowse link 1 72,278,939 72,448,907 RGD:13508589
G DAPK3 death associated protein kinase 3 JBrowse link 20 55,590,199 55,603,883 RGD:13508589
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 JBrowse link 17 29,494,641 29,537,933 RGD:13508589
G EIF4A3 eukaryotic translation initiation factor 4A3 JBrowse link 9 1,582,950 1,593,893 RGD:13508589
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 JBrowse link 26 24,355,326 24,403,306 RGD:13508589
G ENC1 ectodermal-neural cortex 1 JBrowse link 2 57,175,851 57,184,445 RGD:13508589
G FMR1 FMRP translational regulator 1 JBrowse link X 116,249,079 116,287,008 RGD:13508589
G FXR1 FMR1 autosomal homolog 1 JBrowse link 34 14,129,978 14,192,016 RGD:13508589
G FXR2 FMR1 autosomal homolog 2 JBrowse link 5 32,510,830 32,525,680 RGD:13508589
G GRB7 growth factor receptor bound protein 7 JBrowse link 9 22,743,370 22,751,936 RGD:13508589
G GZMB granzyme B JBrowse link 8 4,508,718 4,511,824 RGD:13508589
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 JBrowse link 9 25,199,287 25,240,693 RGD:13508589
G IGFBP5 insulin like growth factor binding protein 5 JBrowse link 37 23,575,265 23,596,970 RGD:13508589
G ILF3 interleukin enhancer binding factor 3 JBrowse link 20 50,511,915 50,544,234 RGD:13508589
G IREB2 iron responsive element binding protein 2 JBrowse link 13 38,398,445 38,441,128 RGD:13508589
G LIN28A lin-28 homolog A JBrowse link 2 73,613,069 73,628,211 RGD:13508589
G MALSU1 mitochondrial assembly of ribosomal large subunit 1 JBrowse link 14 36,959,667 36,968,903 RGD:13508589
G MRPL13 mitochondrial ribosomal protein L13 JBrowse link 13 19,266,373 19,313,754 RGD:13508589
G NANOS2 nanos C2HC-type zinc finger 2 JBrowse link 1 109,716,634 109,717,701 RGD:13508589
G NANOS3 nanos C2HC-type zinc finger 3 RGD:13508589
G PCIF1 PDX1 C-terminal inhibiting factor 1 JBrowse link 24 33,214,370 33,225,922 RGD:13508589
G PRG3 proteoglycan 3, pro eosinophil major basic protein 2 JBrowse link 18 38,765,682 38,769,711 RGD:13508589
G PURA purine rich element binding protein A JBrowse link 2 35,325,630 35,345,366 RGD:13508589
G PUS7 pseudouridine synthase 7 JBrowse link 18 14,882,276 14,939,070 RGD:13508589
G RPL13A ribosomal protein L13a JBrowse link 1 107,010,190 107,014,267 RGD:13508589
G SAMD4A sterile alpha motif domain containing 4A JBrowse link 8 30,476,425 30,687,240 RGD:13508589
G SAMD4B sterile alpha motif domain containing 4B JBrowse link 1 113,828,432 113,857,336 RGD:13508589
G SHMT1 serine hydroxymethyltransferase 1 JBrowse link 5 41,221,531 41,248,653 RGD:13508589
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein JBrowse link 12 45,613,947 45,644,879 RGD:13508589
G TIA1 TIA1 cytotoxic granule associated RNA binding protein JBrowse link 10 68,768,080 68,798,869 RGD:13508589
G TOB1 transducer of ERBB2, 1 JBrowse link 9 26,736,805 26,741,119 RGD:13508589
G TRIM71 tripartite motif containing 71 JBrowse link 23 3,888,287 3,959,910 RGD:13508589
G TSC1 TSC complex subunit 1 JBrowse link 9 51,409,307 51,459,546 RGD:13508589
negative regulation of translation in response to endoplasmic reticulum stress term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SESN2 sestrin 2 JBrowse link 2 72,151,464 72,168,861 RGD:13508589
negative regulation of translation in response to stress term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC610648 RNA-binding protein 14 JBrowse link 18 50,683,227 50,728,512 RGD:13508589
negative regulation of translational elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SRP9 signal recognition particle 9 JBrowse link 7 39,012,142 39,023,009 RGD:13508589
negative regulation of translational frameshifting term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SHFL shiftless antiviral inhibitor of ribosomal frameshifting JBrowse link 20 50,961,557 50,966,261 RGD:13508589
negative regulation of translational initiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AGO2 argonaute RISC catalytic component 2 JBrowse link 13 35,169,243 35,230,252 RGD:13508589
G BANK1 B cell scaffold protein with ankyrin repeats 1 JBrowse link 32 23,322,654 23,603,233 RGD:13508589
G EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 JBrowse link 16 27,389,850 27,410,154 RGD:13508589
G EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 JBrowse link 4 21,339,037 21,364,224 RGD:13508589
G EIF4EBP3 eukaryotic translation initiation factor 4E binding protein 3 JBrowse link 2 35,742,811 35,744,749 RGD:13508589
G LARP1 La ribonucleoprotein 1, translational regulator JBrowse link 4 54,991,528 55,045,976 RGD:13508589
G LOC610648 RNA-binding protein 14 JBrowse link 18 50,683,227 50,728,512 RGD:13508589
G PAIP2 poly(A) binding protein interacting protein 2 JBrowse link 2 34,671,130 34,695,974 RGD:13508589
G PAIP2B poly(A) binding protein interacting protein 2B JBrowse link 17 51,381,891 51,388,964 RGD:13508589
G TPR translocated promoter region, nuclear basket protein JBrowse link 7 19,376,951 19,442,368 RGD:13508589
negative regulation of translational initiation in response to stress term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EIF2S1 eukaryotic translation initiation factor 2 subunit alpha JBrowse link 8 41,354,400 41,371,676 RGD:13508589
peptidyl-diphthamide biosynthetic process from peptidyl-histidine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DPH1 diphthamide biosynthesis 1 JBrowse link 9 46,137,573 46,147,829 RGD:13508589
G DPH2 diphthamide biosynthesis 2 JBrowse link 15 16,287,300 16,291,079 RGD:13508589
G DPH3 diphthamide biosynthesis 3 JBrowse link 23 26,522,367 26,529,808 RGD:13508589
G DPH5 diphthamide biosynthesis 5 JBrowse link 6 49,095,188 49,131,427 RGD:13508589
G DPH6 diphthamine biosynthesis 6 JBrowse link 30 3,000,723 3,146,568 RGD:13508589
positive regulation of amyloid-beta formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCG1 ATP binding cassette subfamily G member 1 JBrowse link 31 36,574,406 36,627,598 RGD:13508589
G APP amyloid beta precursor protein JBrowse link 31 21,351,207 21,614,466 RGD:13508589
G CASP3 caspase 3 JBrowse link 16 45,920,074 45,940,507 RGD:13508589
G CLU clusterin JBrowse link 25 29,982,811 29,999,565 RGD:13508589
G EFNA1 ephrin A1 JBrowse link 7 42,373,197 42,381,161 RGD:13508589
G EPHA4 EPH receptor A4 JBrowse link 37 27,670,143 27,809,642 RGD:13508589
G GSAP gamma-secretase activating protein JBrowse link 18 17,406,903 17,479,429 RGD:13508589
G IFNG interferon gamma JBrowse link 10 10,406,866 10,411,698 RGD:13508589
G LRRTM3 leucine rich repeat transmembrane neuronal 3 JBrowse link 4 18,320,720 18,485,863 RGD:13508589
G TNF tumor necrosis factor JBrowse link 12 1,074,561 1,076,425 RGD:13508589
positive regulation of cap-dependent translational initiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NCK1 NCK adaptor protein 1 JBrowse link 23 33,297,660 33,374,025 RGD:13508589
positive regulation of cap-independent translational initiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G METTL3 methyltransferase like 3 JBrowse link 15 18,528,755 18,546,303 RGD:13508589
G NCK1 NCK adaptor protein 1 JBrowse link 23 33,297,660 33,374,025 RGD:13508589
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 JBrowse link 2 71,760,232 71,791,420 RGD:13508589
positive regulation of ceramide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CCN1 cellular communication network factor 1 JBrowse link 6 62,443,285 62,446,246 RGD:13508589
G PRKCD protein kinase C delta JBrowse link 20 36,723,491 36,751,982 RGD:13508589
G SIRT3 sirtuin 3 JBrowse link 18 25,369,183 25,388,126 RGD:13508589
G SPHK2 sphingosine kinase 2 JBrowse link 1 107,681,425 107,689,790 RGD:13508589
positive regulation of cytoplasmic translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CNBP CCHC-type zinc finger nucleic acid binding protein JBrowse link 20 2,860,915 2,929,307 RGD:13508589
G DHX36 DEAH-box helicase 36 JBrowse link 23 48,404,351 48,456,360 RGD:13508589
G DHX9 DExH-box helicase 9 JBrowse link 7 16,233,763 16,292,576 RGD:13508589
G LIN28A lin-28 homolog A JBrowse link 2 73,613,069 73,628,211 RGD:13508589
G ZCCHC13 zinc finger CCHC-type containing 13 JBrowse link X 57,603,420 57,604,605 RGD:13508589
positive regulation of glucosylceramide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PRKCD protein kinase C delta JBrowse link 20 36,723,491 36,751,982 RGD:13508589
positive regulation of glutathione biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NFE2L2 nuclear factor, erythroid 2 like 2 JBrowse link 36 20,989,205 21,087,044 RGD:13508589
positive regulation of miRNA mediated inhibition of translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EIF4G1 eukaryotic translation initiation factor 4 gamma 1 JBrowse link 34 17,194,588 17,214,498 RGD:13508589
positive regulation of mitochondrial translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C1QBP complement C1q binding protein JBrowse link 5 31,354,665 31,359,672 RGD:13508589
G CDK5RAP1 CDK5 regulatory subunit associated protein 1 JBrowse link 24 22,588,354 22,628,525 RGD:13508589
G FASTKD2 FAST kinase domains 2 JBrowse link 37 15,287,446 15,303,005 RGD:13508589
G FASTKD3 FAST kinase domains 3 JBrowse link 34 6,100,410 6,109,878 RGD:13508589
G MRPS27 mitochondrial ribosomal protein S27 JBrowse link 2 55,263,654 55,351,615 RGD:13508589
G NGRN neugrin, neurite outgrowth associated JBrowse link 3 53,209,206 53,214,629 RGD:13508589
G NSUN4 NOP2/Sun RNA methyltransferase 4 JBrowse link 15 14,054,061 14,069,080 RGD:13508589
G RMND1 required for meiotic nuclear division 1 homolog JBrowse link 1 41,755,099 41,799,589 RGD:13508589
G RPUSD3 RNA pseudouridine synthase D3 JBrowse link 20 8,406,549 8,414,029 RGD:13508589
G RPUSD4 RNA pseudouridine synthase D4 JBrowse link 5 8,300,421 8,311,193 RGD:13508589
G TRMT10C tRNA methyltransferase 10C, mitochondrial RNase P subunit JBrowse link 33 7,944,675 7,949,402 RGD:13508589
G TRUB2 TruB pseudouridine synthase family member 2 JBrowse link 9 55,194,123 55,203,881 RGD:13508589
G UQCC1 ubiquinol-cytochrome c reductase complex assembly factor 1 JBrowse link 24 24,285,147 24,381,819 RGD:13508589
G UQCC2 ubiquinol-cytochrome c reductase complex assembly factor 2 JBrowse link 12 3,050,329 3,063,831 RGD:13508589
positive regulation of sphingomyelin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PRKCD protein kinase C delta JBrowse link 20 36,723,491 36,751,982 RGD:13508589
positive regulation of translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BARHL2 BarH like homeobox 2 JBrowse link 6 57,971,077 57,977,197 RGD:13508589
G BCL3 BCL3 transcription coactivator JBrowse link 1 110,620,850 110,628,830 RGD:13508589
G C4H5orf34 chromosome 4 C5orf34 homolog JBrowse link 4 66,496,210 66,538,317 RGD:13508589
G CTIF cap binding complex dependent translation initiation factor JBrowse link 7 79,780,645 79,998,207 RGD:13508589
G DAZL deleted in azoospermia like JBrowse link 23 26,194,061 26,212,506 RGD:13508589
G EEF2 eukaryotic translation elongation factor 2 JBrowse link 20 55,577,413 55,586,422 RGD:13508589
G EIF3D eukaryotic translation initiation factor 3 subunit D JBrowse link 10 27,890,913 27,904,887 RGD:13508589
G EIF4A3 eukaryotic translation initiation factor 4A3 JBrowse link 9 1,582,950 1,593,893 RGD:13508589
G EIF6 eukaryotic translation initiation factor 6 JBrowse link 24 24,259,623 24,266,453 RGD:13508589
G ERBB2 erb-b2 receptor tyrosine kinase 2 JBrowse link 9 22,760,373 22,785,367 RGD:13508589
G FMR1 FMRP translational regulator 1 JBrowse link X 116,249,079 116,287,008 RGD:13508589
G FXR1 FMR1 autosomal homolog 1 JBrowse link 34 14,129,978 14,192,016 RGD:13508589
G FXR2 FMR1 autosomal homolog 2 JBrowse link 5 32,510,830 32,525,680 RGD:13508589
G GUF1 GUF1 homolog, GTPase JBrowse link 13 41,183,708 41,208,203 RGD:13508589
G HNRNPD heterogeneous nuclear ribonucleoprotein D JBrowse link 32 6,323,444 6,341,238 RGD:13508589
G LARP4 La ribonucleoprotein 4 JBrowse link 27 4,255,070 4,408,066 RGD:13508589
G LARP6 La ribonucleoprotein 6, translational regulator JBrowse link 30 34,521,695 34,535,629 RGD:13508589
G MIF4GD MIF4G domain containing JBrowse link 9 5,225,683 5,231,709 RGD:13508589
G MTOR mechanistic target of rapamycin kinase JBrowse link 2 84,818,893 84,939,283 RGD:13508589
G NAT10 N-acetyltransferase 10 JBrowse link 18 33,654,701 33,692,642 RGD:13508589
G NIBAN1 niban apoptosis regulator 1 JBrowse link 7 18,021,782 18,234,759 RGD:13508589
G PAIP1 poly(A) binding protein interacting protein 1 JBrowse link 4 66,460,946 66,490,437 RGD:13508589
G PCIF1 PDX1 C-terminal inhibiting factor 1 JBrowse link 24 33,214,370 33,225,922 RGD:13508589
G PIWIL2 piwi like RNA-mediated gene silencing 2 JBrowse link 25 34,911,120 34,987,287 RGD:13508589
G PLD1 phospholipase D1 JBrowse link 34 35,917,759 36,080,383 RGD:13508589
G PLXNB2 plexin B2 JBrowse link 10 16,949,230 16,975,109 RGD:13508589
G PRR16 proline rich 16 JBrowse link 11 9,818,714 10,128,006 RGD:13508589
G PYM1 PYM homolog 1, exon junction complex associated factor JBrowse link 10 251,493 266,996 RGD:13508589
G SAMD4A sterile alpha motif domain containing 4A JBrowse link 8 30,476,425 30,687,240 RGD:13508589
G SOX4 SRY-box transcription factor 4 JBrowse link 35 20,098,783 20,101,357 RGD:13508589
G TARBP2 TARBP2 subunit of RISC loading complex JBrowse link 27 1,715,157 1,720,050 RGD:13508589
G THBS1 thrombospondin 1 JBrowse link 30 6,770,212 6,786,875 RGD:13508589
G UPF3A UPF3A regulator of nonsense mediated mRNA decay JBrowse link 22 61,320,575 61,373,082 RGD:13508589
G UPF3B UPF3B regulator of nonsense mediated mRNA decay JBrowse link X 91,835,845 91,851,755 RGD:13508589
G ZCCHC4 zinc finger CCHC-type containing 4 JBrowse link 3 84,921,250 84,966,783 RGD:13508589
positive regulation of translation in response to endoplasmic reticulum stress term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EIF4G1 eukaryotic translation initiation factor 4 gamma 1 JBrowse link 34 17,194,588 17,214,498 RGD:13508589
G NCK1 NCK adaptor protein 1 JBrowse link 23 33,297,660 33,374,025 RGD:13508589
G NCK2 NCK adaptor protein 2 JBrowse link 10 37,584,351 37,734,388 RGD:13508589
positive regulation of translational elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EIF5A eukaryotic translation initiation factor 5A JBrowse link 5 32,268,103 32,272,970 RGD:13508589
G EIF5A2 eukaryotic translation initiation factor 5A2 JBrowse link 34 35,309,812 35,322,382 RGD:13508589
G USP16 ubiquitin specific peptidase 16 JBrowse link 31 24,034,399 24,060,268 RGD:13508589
positive regulation of translational fidelity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CDK5RAP1 CDK5 regulatory subunit associated protein 1 JBrowse link 24 22,588,354 22,628,525 RGD:13508589
G EIF2S3 eukaryotic translation initiation factor 2 subunit gamma JBrowse link X 19,662,132 19,680,223 RGD:13508589
G RPS9 ribosomal protein S9 JBrowse link 1 102,989,338 102,995,755 RGD:13508589
positive regulation of translational initiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BOLL boule homolog, RNA binding protein JBrowse link 37 7,167,993 7,216,590 RGD:13508589
G DAZL deleted in azoospermia like JBrowse link 23 26,194,061 26,212,506 RGD:13508589
G DHX29 DExH-box helicase 29 JBrowse link 2 42,611,630 42,660,328 RGD:13508589
G KHDRBS1 KH RNA binding domain containing, signal transduction associated 1 JBrowse link 2 69,108,822 69,148,067 RGD:13508589
G LARP1 La ribonucleoprotein 1, translational regulator JBrowse link 4 54,991,528 55,045,976 RGD:13508589
G POLR2D RNA polymerase II subunit D JBrowse link 19 22,754,118 22,774,054 RGD:13508589
G POLR2G RNA polymerase II subunit G JBrowse link 18 53,916,431 53,919,724 RGD:13508589
G RPS6KB1 ribosomal protein S6 kinase B1 JBrowse link 9 34,387,084 34,590,603 RGD:13508589
G RPS6KB2 ribosomal protein S6 kinase B2 JBrowse link 18 50,034,318 50,039,892 RGD:13508589
G UHMK1 U2AF homology motif kinase 1 JBrowse link 38 20,247,564 20,277,941 RGD:13508589
G YTHDF1 YTH N6-methyladenosine RNA binding protein 1 JBrowse link 24 46,927,218 46,940,015 RGD:13508589
positive regulation of translational initiation by iron term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TNF tumor necrosis factor JBrowse link 12 1,074,561 1,076,425 RGD:13508589
positive regulation of translational termination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EIF5A eukaryotic translation initiation factor 5A JBrowse link 5 32,268,103 32,272,970 RGD:13508589
G EIF5A2 eukaryotic translation initiation factor 5A2 JBrowse link 34 35,309,812 35,322,382 RGD:13508589
G JMJD4 jumonji domain containing 4 JBrowse link 14 1,100,002 1,109,965 RGD:13508589
regulation of acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PDK1 pyruvate dehydrogenase kinase 1 JBrowse link 36 16,918,329 16,944,532 RGD:13508589
G PDK2 pyruvate dehydrogenase kinase 2 JBrowse link 9 26,099,457 26,116,094 RGD:13508589
G PDK3 pyruvate dehydrogenase kinase 3 JBrowse link X 19,994,383 20,058,979 RGD:13508589
G PDK4 pyruvate dehydrogenase kinase 4 JBrowse link 14 20,825,861 20,839,290 RGD:13508589
regulation of ceramide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SAMD8 sterile alpha motif domain containing 8 JBrowse link 4 25,375,127 25,424,792 RGD:13508589
regulation of cytoplasmic translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ZNF385A zinc finger protein 385A JBrowse link 27 928,250 948,275 RGD:13508589
regulation of cytoplasmic translational fidelity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AARS1 alanyl-tRNA synthetase 1 JBrowse link 5 76,288,780 76,343,262 RGD:13508589
regulation of eIF2 alpha phosphorylation by amino acid starvation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 JBrowse link 30 7,144,727 7,248,014 RGD:13508589
regulation of eIF2 alpha phosphorylation by heme term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EIF2AK1 eukaryotic translation initiation factor 2 alpha kinase 1 JBrowse link 6 11,447,225 11,478,611 RGD:13508589
regulation of glutathione biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SLC7A11 solute carrier family 7 member 11 JBrowse link 19 4,289,792 4,379,060 RGD:13508589
regulation of mitochondrial translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ALKBH1 alkB homolog 1, histone H2A dioxygenase JBrowse link 8 50,444,994 50,471,151 RGD:13508589
G LRPPRC leucine rich pentatricopeptide repeat containing JBrowse link 10 46,325,312 46,438,376 RGD:13508589
G MTG1 mitochondrial ribosome associated GTPase 1 RGD:13508589
G MTG2 mitochondrial ribosome associated GTPase 2 JBrowse link 24 46,216,653 46,229,400 RGD:13508589
G NSUN3 NOP2/Sun RNA methyltransferase 3 JBrowse link 33 1,774,908 1,826,948 RGD:13508589
G SHMT2 serine hydroxymethyltransferase 2 JBrowse link 10 1,357,347 1,362,511 RGD:13508589
G TSFM Ts translation elongation factor, mitochondrial RGD:13508589
regulation of pentose-phosphate shunt term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PGAM1 phosphoglycerate mutase 1 JBrowse link 28 10,720,235 10,727,709 RGD:13508589
G TIGAR TP53 induced glycolysis regulatory phosphatase JBrowse link 27 40,521,751 40,549,304 RGD:13508589
regulation of translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACO1 aconitase 1 JBrowse link 11 49,699,072 49,758,783 RGD:13508589
G AGO2 argonaute RISC catalytic component 2 JBrowse link 13 35,169,243 35,230,252 RGD:13508589
G AIRE autoimmune regulator JBrowse link 31 38,139,513 38,149,294 RGD:13508589
G APP amyloid beta precursor protein JBrowse link 31 21,351,207 21,614,466 RGD:13508589
G CPEB1 cytoplasmic polyadenylation element binding protein 1 JBrowse link 3 54,405,140 54,499,614 RGD:13508589
G CPEB2 cytoplasmic polyadenylation element binding protein 2 JBrowse link 3 65,200,175 65,277,353 RGD:13508589
G CPEB4 cytoplasmic polyadenylation element binding protein 4 JBrowse link 4 38,604,065 38,665,200 RGD:13508589
G CYFIP1 cytoplasmic FMR1 interacting protein 1 JBrowse link 3 32,096,471 32,170,107 RGD:13508589
G DDX25 DEAD-box helicase 25 JBrowse link 5 8,566,748 8,585,965 RGD:13508589
G EIF2A eukaryotic translation initiation factor 2A JBrowse link 23 45,202,663 45,235,559 RGD:13508589
G FXR1 FMR1 autosomal homolog 1 JBrowse link 34 14,129,978 14,192,016 RGD:13508589
G GAPDH glyceraldehyde-3-phosphate dehydrogenase JBrowse link 27 38,468,889 38,472,653 RGD:13508589
G GCN1 GCN1 activator of EIF2AK4 JBrowse link 26 16,087,380 16,146,865 RGD:13508589
G GEMIN5 gem nuclear organelle associated protein 5 JBrowse link 4 54,894,747 54,934,869 RGD:13508589
G HNRNPL heterogeneous nuclear ribonucleoprotein L JBrowse link 1 114,267,195 114,279,107 RGD:13508589
G HNRNPLL heterogeneous nuclear ribonucleoprotein L like JBrowse link 17 30,644,695 30,684,485 RGD:13508589
G MAPKAPK5 MAPK activated protein kinase 5 JBrowse link 26 9,380,551 9,420,564 RGD:13508589
G MATR3 matrin 3 JBrowse link 11 26,736,728 26,790,449 RGD:13508589
G NOLC1 nucleolar and coiled-body phosphoprotein 1 JBrowse link 28 14,686,001 14,699,082 RGD:13508589
G PTBP1 polypyrimidine tract binding protein 1 JBrowse link 20 57,806,450 57,818,435 RGD:13508589
G PTBP2 polypyrimidine tract binding protein 2 JBrowse link 6 52,870,944 52,948,673 RGD:13508589
G PTBP3 polypyrimidine tract binding protein 3 JBrowse link 11 66,727,670 66,847,755 RGD:13508589
G PUM3 pumilio RNA binding family member 3 JBrowse link 1 91,391,619 91,436,378 RGD:13508589
G QKI QKI, KH domain containing RNA binding JBrowse link 1 51,800,294 51,956,891 RGD:13508589
G RBM20 RNA binding motif protein 20 JBrowse link 28 21,971,424 22,162,798 RGD:13508589
G RBM3 RNA binding motif protein 3 JBrowse link X 41,806,072 41,809,803 RGD:13508589
G RBM4B RNA binding motif protein 4B JBrowse link 18 50,676,138 50,686,061 RGD:13508589
G RPS3 ribosomal protein S3 JBrowse link 21 23,180,515 23,187,034 RGD:13508589
G TARBP2 TARBP2 subunit of RISC loading complex JBrowse link 27 1,715,157 1,720,050 RGD:13508589
G TCOF1 treacle ribosome biogenesis factor 1 JBrowse link 4 58,699,069 58,738,677 RGD:13508589
G UNK unk zinc finger JBrowse link 9 4,767,696 4,801,324 RGD:13508589
regulation of translation at postsynapse, modulating synaptic transmission term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CYFIP1 cytoplasmic FMR1 interacting protein 1 JBrowse link 3 32,096,471 32,170,107 RGD:13508589
regulation of translation by machinery localization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PADI6 peptidyl arginine deiminase 6 JBrowse link 2 80,888,961 80,907,780 RGD:13508589
regulation of translational elongation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ALKBH1 alkB homolog 1, histone H2A dioxygenase JBrowse link 8 50,444,994 50,471,151 RGD:13508589
G GRM5 glutamate metabotropic receptor 5 JBrowse link 21 10,980,186 11,496,539 RGD:13508589
regulation of translational initiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ALKBH1 alkB homolog 1, histone H2A dioxygenase JBrowse link 8 50,444,994 50,471,151 RGD:13508589
G C4H5orf34 chromosome 4 C5orf34 homolog JBrowse link 4 66,496,210 66,538,317 RGD:13508589
G CTIF cap binding complex dependent translation initiation factor JBrowse link 7 79,780,645 79,998,207 RGD:13508589
G EIF2B1 eukaryotic translation initiation factor 2B subunit alpha JBrowse link 26 6,011,280 6,022,562 RGD:13508589
G EIF2B2 eukaryotic translation initiation factor 2B subunit beta JBrowse link 8 48,110,521 48,117,175 RGD:13508589
G EIF3B eukaryotic translation initiation factor 3 subunit B JBrowse link 6 14,780,318 14,802,938 RGD:13508589
G EIF3K eukaryotic translation initiation factor 3 subunit K JBrowse link 1 114,433,373 114,443,911 RGD:13508589
G EIF4G1 eukaryotic translation initiation factor 4 gamma 1 JBrowse link 34 17,194,588 17,214,498 RGD:13508589
G EIF5 eukaryotic translation initiation factor 5 JBrowse link 8 71,102,628 71,111,971 RGD:13508589
G EIF5B eukaryotic translation initiation factor 5B JBrowse link 10 43,247,536 43,342,754 RGD:13508589
G GLE1 GLE1 RNA export mediator JBrowse link 9 55,024,673 55,059,297 RGD:13508589
G KLHL25 kelch like family member 25 JBrowse link 3 49,339,576 49,375,473 RGD:13508589
G MIF4GD MIF4G domain containing JBrowse link 9 5,225,683 5,231,709 RGD:13508589
G NCBP1 nuclear cap binding protein subunit 1 JBrowse link 11 54,938,250 54,974,536 RGD:13508589
G NCBP2 nuclear cap binding protein subunit 2 JBrowse link 33 29,911,457 29,943,596 RGD:13508589
G PAIP1 poly(A) binding protein interacting protein 1 JBrowse link 4 66,460,946 66,490,437 RGD:13508589
regulation of translational initiation by eIF2 alpha phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EIF2AK1 eukaryotic translation initiation factor 2 alpha kinase 1 JBrowse link 6 11,447,225 11,478,611 RGD:13508589
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 JBrowse link 17 29,494,641 29,537,933 RGD:13508589
regulation of translational termination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ETF1 eukaryotic translation termination factor 1 JBrowse link 11 26,078,611 26,110,805 RGD:13508589
G GLE1 GLE1 RNA export mediator JBrowse link 9 55,024,673 55,059,297 RGD:13508589
G GSPT1 G1 to S phase transition 1 JBrowse link 6 30,931,937 30,971,699 RGD:13508589
G OGFOD1 2-oxoglutarate and iron dependent oxygenase domain containing 1 JBrowse link 2 59,711,440 59,736,448 RGD:13508589
G SHFL shiftless antiviral inhibitor of ribosomal frameshifting JBrowse link 20 50,961,557 50,966,261 RGD:13508589
G UPF1 UPF1 RNA helicase and ATPase JBrowse link 20 44,234,411 44,271,129 RGD:13508589
regulation of urea metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NR1H4 nuclear receptor subfamily 1 group H member 4 JBrowse link 15 39,497,313 39,608,120 RGD:13508589
rescue of stalled ribosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GTPBP2 GTP binding protein 2 JBrowse link 12 12,073,233 12,082,630 RGD:13508589
G LTN1 listerin E3 ubiquitin protein ligase 1 JBrowse link 31 23,942,493 24,008,787 RGD:13508589
G NEMF nuclear export mediator factor JBrowse link 8 26,364,664 26,411,475 RGD:13508589
G RACK1 receptor for activated C kinase 1 JBrowse link 11 426,734 431,087 RGD:13508589
selenocysteine incorporation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EEFSEC eukaryotic elongation factor, selenocysteine-tRNA specific JBrowse link 20 2,138,475 2,405,420 RGD:13508589
G PSTK phosphoseryl-tRNA kinase JBrowse link 28 32,535,258 32,546,738 RGD:13508589
G SECISBP2 SECIS binding protein 2 JBrowse link 1 96,879,840 96,927,583 RGD:13508589
G SECISBP2L SECIS binding protein 2 like JBrowse link 30 15,214,550 15,274,206 RGD:13508589
G SEPSECS Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase JBrowse link 3 85,071,011 85,106,272 RGD:13508589
G TRNAU1AP tRNA selenocysteine 1 associated protein 1 JBrowse link 2 71,918,264 71,944,142 RGD:13508589
translational attenuation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TRAP1 TNF receptor associated protein 1 JBrowse link 6 37,544,929 37,596,789 RGD:13508589

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13645
    metabolic process 8513
      regulation of metabolic process 4462
        regulation of cellular metabolic process 4173
          regulation of cellular amide metabolic process 252
            negative regulation of cellular amide metabolic process + 97
            positive regulation of cellular amide metabolic process + 90
            regulation of acyl-CoA biosynthetic process + 4
            regulation of amyloid-beta formation + 14
            regulation of antimicrobial peptide biosynthetic process + 0
            regulation of brevianamide F biosynthetic process + 0
            regulation of butyryl-CoA catabolic process to butanol + 0
            regulation of butyryl-CoA catabolic process to butyrate + 0
            regulation of cellular amide catabolic process + 0
            regulation of ceramide biosynthetic process + 9
            regulation of emericellamide biosynthetic process + 0
            regulation of gliotoxin biosynthetic process + 0
            regulation of glucosylceramide catabolic process + 1
            regulation of glutathione biosynthetic process + 2
            regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway + 0
            regulation of penicillin metabolic process + 0
            regulation of pentose-phosphate shunt + 3
            regulation of peptide hormone processing + 0
            regulation of pseurotin A biosynthetic process + 0
            regulation of siderophore biosynthetic process + 0
            regulation of sphingomyelin catabolic process + 1
            regulation of tensidol A biosynthetic process + 0
            regulation of tensidol B biosynthetic process + 0
            regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA + 0
            regulation of translation + 221
            regulation of urea metabolic process + 1
Path 2
Term Annotations click to browse term
  biological_process 13645
    biological regulation 8782
      regulation of biological process 8205
        regulation of cellular process 7736
          regulation of cellular metabolic process 4173
            regulation of cellular amide metabolic process 252
              negative regulation of cellular amide metabolic process + 97
              positive regulation of cellular amide metabolic process + 90
              regulation of acyl-CoA biosynthetic process + 4
              regulation of amyloid-beta formation + 14
              regulation of antimicrobial peptide biosynthetic process + 0
              regulation of brevianamide F biosynthetic process + 0
              regulation of butyryl-CoA catabolic process to butanol + 0
              regulation of butyryl-CoA catabolic process to butyrate + 0
              regulation of cellular amide catabolic process + 0
              regulation of ceramide biosynthetic process + 9
              regulation of emericellamide biosynthetic process + 0
              regulation of gliotoxin biosynthetic process + 0
              regulation of glucosylceramide catabolic process + 1
              regulation of glutathione biosynthetic process + 2
              regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway + 0
              regulation of penicillin metabolic process + 0
              regulation of pentose-phosphate shunt + 3
              regulation of peptide hormone processing + 0
              regulation of pseurotin A biosynthetic process + 0
              regulation of siderophore biosynthetic process + 0
              regulation of sphingomyelin catabolic process + 1
              regulation of tensidol A biosynthetic process + 0
              regulation of tensidol B biosynthetic process + 0
              regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA + 0
              regulation of translation + 221
              regulation of urea metabolic process + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.