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ONTOLOGY REPORT - ANNOTATIONS


Term:diol biosynthetic process
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Accession:GO:0034312 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of a diol, any alcohol containing two hydroxyl groups attached to saturated carbon atoms.
Synonyms:exact_synonym: dihydric alcohol biosynthetic process;   diol anabolism;   diol biosynthesis;   diol formation;   diol synthesis


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diol biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ephx1 epoxide hydrolase 1 JBrowse link 13 99,271,390 99,300,580 RGD:11252156
sphinganine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 JBrowse link 17 11,856,525 11,895,566 RGD:1624291
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 JBrowse link 6 111,334,408 111,417,960 RGD:1624291
sphingosine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca2 ATP binding cassette subfamily A member 2 JBrowse link 3 2,648,787 2,668,770 RGD:1624291
RGD:1600115
G Acer1 alkaline ceramidase 1 JBrowse link 9 10,061,978 10,093,588 RGD:1624291
G Acer2 alkaline ceramidase 2 JBrowse link 5 105,230,540 105,279,732 RGD:1624291
G Acer3 alkaline ceramidase 3 JBrowse link 1 163,160,987 163,263,621 RGD:1624291
G Agk acylglycerol kinase JBrowse link 4 68,483,345 68,561,518 RGD:13792537
G Asah1 N-acylsphingosine amidohydrolase 1 JBrowse link 16 53,998,604 54,030,006 RGD:1600115
RGD:1624291
G Asah2 N-acylsphingosine amidohydrolase 2 JBrowse link 1 250,557,042 250,665,083 RGD:13838800
RGD:13792537
RGD:1624291
RGD:13838794
RGD:13838793
G Gba glucosylceramidase beta JBrowse link 2 188,511,781 188,522,602 RGD:1624291
G Sphk1 sphingosine kinase 1 JBrowse link 10 105,498,728 105,504,401 RGD:1624291
RGD:13792537
RGD:1600115
G Sphk2 sphingosine kinase 2 JBrowse link 1 101,692,972 101,700,604 RGD:1624291
RGD:13792537
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 JBrowse link 17 11,856,525 11,895,566 RGD:1624291
RGD:13792537
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 JBrowse link 6 111,334,408 111,417,960 RGD:1624291
RGD:13792537
G Sptlc3 serine palmitoyltransferase, long chain base subunit 3 JBrowse link 3 132,560,437 132,689,313 RGD:13792537
tetrahydrobiopterin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhfr dihydrofolate reductase JBrowse link 2 21,931,887 21,958,927 RGD:1624291
G Gch1 GTP cyclohydrolase 1 JBrowse link 15 23,935,011 23,968,971 RGD:625450
RGD:13792537
RGD:1624291
G Pcbd1 pterin-4 alpha-carbinolamine dehydratase 1 JBrowse link 20 30,689,690 30,696,465 RGD:1600115
G Pcbd2 pterin-4 alpha-carbinolamine dehydratase 2 JBrowse link 17 8,929,675 8,980,712 RGD:1600115
G Pts 6-pyruvoyl-tetrahydropterin synthase JBrowse link 8 54,954,261 54,961,271 RGD:68294
RGD:1600115
RGD:1624291
G Qdpr quinoid dihydropteridine reductase JBrowse link 14 70,164,682 70,178,284 RGD:729701
RGD:13792537
RGD:8553309
RGD:4139903
RGD:5128582
G RGD1560795 similar to Sepiapterin reductase (SPR) JBrowse link 4 116,933,277 116,936,466 RGD:13792537
G Spr sepiapterin reductase JBrowse link 4 116,912,343 116,916,073 RGD:70022
RGD:13792537
RGD:1600056

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19678
    metabolic process 11954
      small molecule metabolic process 1834
        alcohol metabolic process 351
          alcohol biosynthetic process 147
            polyol biosynthetic process 69
              diol biosynthetic process 22
                (+)-secoisolariciresinol biosynthetic process 0
                (-)-secoisolariciresinol biosynthetic process 0
                asperfuranone biosynthetic process + 0
                glycol biosynthetic process + 0
                sphinganine biosynthetic process 2
                sphingosine biosynthetic process 13
                tetrahydrobiopterin biosynthetic process 8
                verruculogen biosynthetic process 0
Path 2
Term Annotations click to browse term
  biological_process 19678
    metabolic process 11954
      organic substance metabolic process 11359
        organic hydroxy compound metabolic process 529
          alcohol metabolic process 351
            alcohol biosynthetic process 147
              polyol biosynthetic process 69
                diol biosynthetic process 22
                  (+)-secoisolariciresinol biosynthetic process 0
                  (-)-secoisolariciresinol biosynthetic process 0
                  asperfuranone biosynthetic process + 0
                  glycol biosynthetic process + 0
                  sphinganine biosynthetic process 2
                  sphingosine biosynthetic process 13
                  tetrahydrobiopterin biosynthetic process 8
                  verruculogen biosynthetic process 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.