ONTOLOGY REPORT - ANNOTATIONS


Term:cell junction organization
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Accession:GO:0034330 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell junction. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.
Synonyms:exact_synonym: cell junction assembly and maintenance;   cell junction organisation
 related_synonym: cell junction biogenesis


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adherens junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1600115
RGD:1624291
G Hipk1 homeodomain interacting protein kinase 1 JBrowse link 2 206,224,015 206,274,910 RGD:1624291
RGD:1600115
G Ramp2 receptor activity modifying protein 2 JBrowse link 10 89,166,170 89,168,962 RGD:1624291
RGD:1600115
G Smad7 SMAD family member 7 JBrowse link 18 71,395,830 71,424,164 RGD:1624291
RGD:1600115
G Tbcd tubulin folding cofactor D JBrowse link 10 110,643,693 110,800,493 RGD:13792537
G Vcl vinculin JBrowse link 15 3,455,211 3,544,738 RGD:1624291
RGD:1600115
G Zfp703 zinc finger protein 703 JBrowse link 16 69,237,857 69,242,028 RGD:1624291
RGD:1600115
adherens junction maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afdn afadin, adherens junction formation factor JBrowse link 1 53,713,873 53,861,918 RGD:1624291
RGD:1600115
G Inava innate immunity activator JBrowse link 13 53,088,438 53,108,713 RGD:1624291
RGD:13792537
G Mtss1 MTSS I-BAR domain containing 1 JBrowse link 7 98,820,799 98,960,878 RGD:1624291
G Pkp2 plakophilin 2 JBrowse link 11 88,912,163 88,972,213 RGD:6784508
G Rassf8 Ras association domain family member 8 JBrowse link 4 180,059,020 180,135,924 RGD:1600115
adherens junction organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdc42 cell division cycle 42 JBrowse link 5 155,690,267 155,728,385 RGD:1624291
RGD:1600115
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:1624291
RGD:13792537
G Cdh10 cadherin 10 JBrowse link 2 69,415,174 69,636,849 RGD:13792537
G Cdh11 cadherin 11 JBrowse link 19 2,391,181 2,551,245 RGD:13792537
G Cdh12 cadherin 12 JBrowse link 2 71,310,228 72,540,063 RGD:13792537
G Cdh13 cadherin 13 JBrowse link 19 50,848,793 51,971,618 RGD:13792537
G Cdh15 cadherin 15 JBrowse link 19 55,669,661 55,689,986 RGD:13792537
G Cdh17 cadherin 17 JBrowse link 5 25,354,187 25,443,675 RGD:13792537
G Cdh18 cadherin 18 JBrowse link 2 73,651,408 74,693,342 RGD:13792537
G Cdh19 cadherin 19 JBrowse link 13 32,344,954 32,469,887 RGD:13792537
G Cdh2 cadherin 2 JBrowse link 18 8,146,971 8,366,037 RGD:13792537
G Cdh20 cadherin 20 JBrowse link 13 24,630,298 24,914,463 RGD:13792537
G Cdh22 cadherin 22 JBrowse link 3 161,574,993 161,971,102 RGD:13792537
G Cdh24 cadherin 24 JBrowse link 15 33,277,845 33,287,546 RGD:13792537
G Cdh26 cadherin 26 JBrowse link 3 173,969,004 174,020,867 RGD:13792537
G Cdh3 cadherin 3 JBrowse link 19 38,668,957 38,719,801 RGD:13792537
G Cdh4 cadherin 4 JBrowse link 3 175,220,520 175,283,144 RGD:13792537
G Cdh5 cadherin 5 JBrowse link 19 1,025,122 1,074,333 RGD:13792537
G Cdh6 cadherin 6 JBrowse link 2 63,100,723 63,246,618 RGD:13792537
G Cdh7 cadherin 7 JBrowse link 13 31,081,064 31,228,884 RGD:13792537
G Cdh8 cadherin 8 JBrowse link 19 6,031,654 6,431,502 RGD:13792537
G Cdh9 cadherin 9 JBrowse link 2 66,938,796 67,078,897 RGD:13792537
G Csk C-terminal Src kinase JBrowse link 8 62,405,714 62,424,707 RGD:5134367
RGD:13792537
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1624291
G Dsp desmoplakin JBrowse link 17 27,286,811 27,334,453 RGD:1624291
RGD:1600115
G Numb NUMB, endocytic adaptor protein JBrowse link 6 107,279,917 107,325,345 RGD:1624291
RGD:1600115
G Numbl NUMB-like, endocytic adaptor protein JBrowse link 1 84,067,841 84,091,659 RGD:1624291
RGD:1600115
G Rab8b RAB8B, member RAS oncogene family JBrowse link 8 72,641,680 72,714,646 RGD:8554779
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:5134367
apical junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cldn19 claudin 19 JBrowse link 5 138,300,692 138,307,982 RGD:1624291
RGD:1600115
G Ctnna1 catenin alpha 1 JBrowse link 18 27,923,229 28,055,972 RGD:1624291
RGD:1600115
G Fbf1 Fas binding factor 1 JBrowse link 10 104,692,791 104,718,630 RGD:1624291
RGD:1600115
G Pkn2 protein kinase N2 JBrowse link 2 248,735,699 248,840,735 RGD:1600115
RGD:1624291
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:1624291
RGD:1600115
G Rhoc ras homolog family member C JBrowse link 2 207,271,692 207,278,010 RGD:1624291
RGD:1600115
G Vcl vinculin JBrowse link 15 3,455,211 3,544,738 RGD:1600115
RGD:1624291
G Wdr1 WD repeat domain 1 JBrowse link 14 76,990,014 77,023,739 RGD:1624291
RGD:1600115
bicellular tight junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn4 actinin alpha 4 JBrowse link 1 87,078,012 87,147,347 RGD:1624291
RGD:1600115
G Afdn afadin, adherens junction formation factor JBrowse link 1 53,713,873 53,861,918 RGD:1624291
G Alox12b arachidonate 12-lipoxygenase, 12R type JBrowse link 10 55,744,646 55,756,524 RGD:1624291
G Aloxe3 arachidonate lipoxygenase 3 JBrowse link 10 55,711,996 55,735,915 RGD:1624291
G Arl2 ADP-ribosylation factor like GTPase 2 JBrowse link 1 221,504,150 221,516,191 RGD:1600115
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:1624291
G Cgn cingulin JBrowse link 2 195,909,691 195,937,130 RGD:1624291
G Cldn1 claudin 1 JBrowse link 11 77,815,216 77,830,373 RGD:1624291
RGD:1600115
G Cldn3 claudin 3 JBrowse link 12 21,831,341 21,832,813 RGD:1624291
RGD:1600115
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1624291
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link 11 72,164,566 72,378,895 RGD:1624291
RGD:1600115
G Ect2 epithelial cell transforming 2 JBrowse link 2 112,769,385 112,831,476 RGD:1624291
RGD:1600115
G Frmpd2 FERM and PDZ domain containing 2 JBrowse link 16 9,745,171 9,879,490 RGD:1624291
G Grhl2 grainyhead-like transcription factor 2 JBrowse link 7 76,058,623 76,197,360 RGD:1624291
RGD:1600115
G Itgb1 integrin subunit beta 1 JBrowse link 19 61,677,512 61,725,537 RGD:2325293
G Marveld2 MARVEL domain containing 2 JBrowse link 2 30,612,746 30,634,308 RGD:1624291
RGD:1600115
G Marveld3 MARVEL domain containing 3 JBrowse link 19 41,710,076 41,724,923 RGD:1624291
RGD:1600115
G Micall2 MICAL-like 2 JBrowse link 12 16,988,013 17,016,794 RGD:1624291
RGD:1600115
G Mpp5 membrane palmitoylated protein 5 JBrowse link 6 101,923,675 102,029,705 RGD:1600115
G Mpp7 membrane palmitoylated protein 7 JBrowse link 17 60,057,077 60,250,303 RGD:1624291
RGD:1600115
G Mtdh metadherin JBrowse link 7 72,771,018 72,830,599 RGD:1359738
G Ocln occludin JBrowse link 2 30,527,327 30,577,218 RGD:1624291
RGD:1600115
G Pard3 par-3 family cell polarity regulator JBrowse link 19 60,017,746 60,580,628 RGD:8553352
G Pdcd6ip programmed cell death 6 interacting protein JBrowse link 8 121,916,233 121,973,145 RGD:1624291
RGD:1600115
G Pof1b POF1B, actin binding protein JBrowse link X 84,099,618 84,167,717 RGD:1624291
RGD:1600115
G Rab13 RAB13, member RAS oncogene family JBrowse link 2 189,581,209 189,586,358 RGD:1600115
RGD:1624291
G Ramp2 receptor activity modifying protein 2 JBrowse link 10 89,166,170 89,168,962 RGD:1624291
RGD:1600115
G Srf serum response factor JBrowse link 9 16,737,637 16,747,226 RGD:1624291
RGD:1600115
G Tbcd tubulin folding cofactor D JBrowse link 10 110,643,693 110,800,493 RGD:13792537
G Tjp1 tight junction protein 1 JBrowse link 1 126,146,489 126,515,359 RGD:1624291
G Wnt11 Wnt family member 11 JBrowse link 1 163,794,136 163,813,756 RGD:1624291
RGD:1600115
cell junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Capza1 capping actin protein of muscle Z-line subunit alpha 1 JBrowse link 2 207,305,748 207,350,812 RGD:1624291
RGD:1600115
G Cdc42 cell division cycle 42 JBrowse link 5 155,690,267 155,728,385 RGD:1624291
RGD:1600115
G Grhl2 grainyhead-like transcription factor 2 JBrowse link 7 76,058,623 76,197,360 RGD:1624291
G Myo9a myosin IXA JBrowse link 8 64,573,248 64,777,607 RGD:1600115
RGD:1624291
G Ophn1 oligophrenin 1 JBrowse link X 68,185,865 68,579,518 RGD:1624291
RGD:1600115
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:1624291
RGD:1600115
G Sh3bp1 SH3-domain binding protein 1 JBrowse link 7 120,125,747 120,138,148 RGD:1624291
RGD:1600115
G Vmp1 vacuole membrane protein 1 JBrowse link 10 73,901,988 74,001,900 RGD:1624291
RGD:1600115
cell-cell junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arvcf ARVCF, delta catenin family member JBrowse link 11 86,736,125 86,793,795 RGD:13792537
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:13792537
G Cdh10 cadherin 10 JBrowse link 2 69,415,174 69,636,849 RGD:13792537
G Cdh11 cadherin 11 JBrowse link 19 2,391,181 2,551,245 RGD:13792537
G Cdh12 cadherin 12 JBrowse link 2 71,310,228 72,540,063 RGD:13792537
G Cdh13 cadherin 13 JBrowse link 19 50,848,793 51,971,618 RGD:13792537
G Cdh15 cadherin 15 JBrowse link 19 55,669,661 55,689,986 RGD:13792537
G Cdh17 cadherin 17 JBrowse link 5 25,354,187 25,443,675 RGD:13792537
G Cdh18 cadherin 18 JBrowse link 2 73,651,408 74,693,342 RGD:13792537
G Cdh19 cadherin 19 JBrowse link 13 32,344,954 32,469,887 RGD:13792537
G Cdh2 cadherin 2 JBrowse link 18 8,146,971 8,366,037 RGD:13792537
G Cdh20 cadherin 20 JBrowse link 13 24,630,298 24,914,463 RGD:13792537
G Cdh22 cadherin 22 JBrowse link 3 161,574,993 161,971,102 RGD:13792537
G Cdh24 cadherin 24 JBrowse link 15 33,277,845 33,287,546 RGD:13792537
G Cdh26 cadherin 26 JBrowse link 3 173,969,004 174,020,867 RGD:13792537
G Cdh3 cadherin 3 JBrowse link 19 38,668,957 38,719,801 RGD:13792537
G Cdh4 cadherin 4 JBrowse link 3 175,220,520 175,283,144 RGD:13792537
G Cdh5 cadherin 5 JBrowse link 19 1,025,122 1,074,333 RGD:1624291
RGD:13792537
G Cdh6 cadherin 6 JBrowse link 2 63,100,723 63,246,618 RGD:13792537
G Cdh7 cadherin 7 JBrowse link 13 31,081,064 31,228,884 RGD:13792537
G Cdh8 cadherin 8 JBrowse link 19 6,031,654 6,431,502 RGD:13792537
G Cdh9 cadherin 9 JBrowse link 2 66,938,796 67,078,897 RGD:13792537
G Cldn5 claudin 5 JBrowse link 11 86,356,292 86,357,718 RGD:1624291
G Ctnnd1 catenin delta 1 JBrowse link 3 72,001,904 72,053,047 RGD:13792537
G Ctnnd2 catenin delta 2 JBrowse link 2 83,227,247 84,094,315 RGD:13792537
G Flcn folliculin JBrowse link 10 46,153,185 46,172,331 RGD:1624291
RGD:1600115
G Fscn1 fascin actin-bundling protein 1 JBrowse link 12 13,655,459 13,668,595 RGD:1624291
RGD:1600115
G Hdac7 histone deacetylase 7 JBrowse link 7 139,280,396 139,319,108 RGD:1624291
RGD:1600115
G Heg1 heart development protein with EGF-like domains 1 JBrowse link 11 70,234,248 70,322,966 RGD:1600115
G Lin7b lin-7 homolog B, crumbs cell polarity complex component JBrowse link 1 101,358,313 101,361,439 RGD:633233
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 JBrowse link 7 30,003,429 30,162,095 RGD:1600115
RGD:1624291
G Pard6b par-6 family cell polarity regulator beta JBrowse link 3 164,822,111 164,843,395 RGD:1600115
G Pkp1 plakophilin 1 JBrowse link 13 52,705,174 52,753,089 RGD:13792537
G Pkp3 plakophilin 3 JBrowse link 1 213,884,795 213,897,783 RGD:13792537
G Pkp4 plakophilin 4 JBrowse link 3 45,211,097 45,414,524 RGD:1624291
RGD:13792537
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 JBrowse link 12 47,698,915 47,737,902 RGD:1624291
RGD:1600115
cell-cell junction maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd177 CD177 molecule JBrowse link 1 82,964,683 82,987,306 RGD:1624291
G Csf1r colony stimulating factor 1 receptor JBrowse link 18 56,414,493 56,458,300 RGD:1600115
RGD:1624291
G F2r coagulation factor II (thrombin) receptor JBrowse link 2 26,118,760 26,135,340 RGD:1600115
RGD:1624291
G F2rl1 F2R like trypsin receptor 1 JBrowse link 2 25,222,324 25,235,275 RGD:1624291
RGD:1600115
G Mpz myelin protein zero JBrowse link 13 89,524,204 89,530,070 RGD:1624291
G Myadm myeloid-associated differentiation marker JBrowse link 1 64,438,465 64,448,332 RGD:1624291
G Pard6a par-6 family cell polarity regulator alpha JBrowse link 19 37,668,133 37,670,450 RGD:1600115
RGD:1624291
G Prtn3 proteinase 3 JBrowse link 7 12,643,712 12,646,951 RGD:1624291
RGD:1600115
G Shroom2 shroom family member 2 JBrowse link X 23,478,869 23,649,424 RGD:1624291
cell-cell junction organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ajm1 apical junction component 1 homolog JBrowse link 3 2,799,032 2,806,686 RGD:1600115
G Ccm2 CCM2 scaffold protein JBrowse link 14 86,812,728 86,859,408 RGD:1624291
RGD:1600115
G Ceacam1 carcinoembryonic antigen related cell adhesion molecule 1 JBrowse link 1 82,327,955 82,344,345 RGD:1624291
G Cldn1 claudin 1 JBrowse link 11 77,815,216 77,830,373 RGD:1624291
G Cldn6 claudin 6 JBrowse link 10 12,999,256 13,002,860 RGD:1624291
RGD:1600115
G Cldn9 claudin 9 JBrowse link 10 13,003,010 13,004,441 RGD:1624291
G Cxadr CXADR, Ig-like cell adhesion molecule JBrowse link 11 16,826,269 16,873,564 RGD:1624291
RGD:1600115
G Flna filamin A JBrowse link X 156,460,785 156,487,245 RGD:1624291
G Gja1 gap junction protein, alpha 1 JBrowse link 20 37,876,650 37,889,097 RGD:1624291
G Heg1 heart development protein with EGF-like domains 1 JBrowse link 11 70,234,248 70,322,966 RGD:1624291
G Hnf4a hepatocyte nuclear factor 4, alpha JBrowse link 3 159,902,441 159,965,003 RGD:1625017
G Lims1 LIM zinc finger domain containing 1 JBrowse link 20 27,895,981 28,004,767 RGD:1624291
RGD:13792537
G Lims2 LIM zinc finger domain containing 2 JBrowse link 18 24,707,951 24,746,159 RGD:1624291
RGD:13792537
G Marveld2 MARVEL domain containing 2 JBrowse link 2 30,612,746 30,634,308 RGD:1624291
RGD:1600115
G Marveld3 MARVEL domain containing 3 JBrowse link 19 41,710,076 41,724,923 RGD:1624291
G Nf2 neurofibromin 2 JBrowse link 14 84,996,905 85,088,547 RGD:1624291
RGD:1600115
G Ocln occludin JBrowse link 2 30,527,327 30,577,218 RGD:1624291
G Prkci protein kinase C, iota JBrowse link 2 115,941,998 116,002,550 RGD:1624291
RGD:1600115
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:1624291
G Smad3 SMAD family member 3 JBrowse link 8 68,569,530 68,678,349 RGD:1624291
RGD:1600115
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:1624291
RGD:1600115
G Tgfb2 transforming growth factor, beta 2 JBrowse link 13 105,039,639 105,142,010 RGD:1624291
RGD:1600115
G Tgfb3 transforming growth factor, beta 3 JBrowse link 6 109,913,757 109,936,217 RGD:1624291
RGD:1600115
G Xirp2 xin actin-binding repeat containing 2 JBrowse link 3 53,563,207 53,658,113 RGD:1624291
cell-substrate junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fn1 fibronectin 1 JBrowse link 9 78,900,111 78,969,018 RGD:1624291
RGD:1600115
G Itga5 integrin subunit alpha 5 JBrowse link 7 144,970,444 144,993,652 RGD:1624291
RGD:1600115
G Itgb3 integrin subunit beta 3 JBrowse link 10 92,667,869 92,783,413 RGD:1624291
G Tln1 talin 1 JBrowse link 5 59,033,635 59,063,592 RGD:1624291
RGD:1600115
G Tns1 tensin 1 JBrowse link 9 81,190,192 81,401,020 RGD:1624291
RGD:1600115
desmosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Jup junction plakoglobin JBrowse link 10 88,280,517 88,307,451 RGD:1624291
RGD:1600115
G Pkp2 plakophilin 2 JBrowse link 11 88,912,163 88,972,213 RGD:1624291
G Pkp3 plakophilin 3 JBrowse link 1 213,884,795 213,897,783 RGD:1624291
RGD:1600115
G Prkca protein kinase C, alpha JBrowse link 10 96,186,509 96,585,168 RGD:1624291
RGD:1600115
desmosome disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Snai2 snail family transcriptional repressor 2 JBrowse link 11 90,404,421 90,406,730 RGD:1624291
desmosome organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dsg2 desmoglein 2 JBrowse link 18 15,579,322 15,637,720 RGD:1624291
RGD:1600115
G Dsp desmoplakin JBrowse link 17 27,286,811 27,334,453 RGD:1624291
RGD:1600115
G Grhl1 grainyhead-like transcription factor 1 JBrowse link 6 43,734,837 43,795,757 RGD:1624291
G Nectin1 nectin cell adhesion molecule 1 JBrowse link 8 48,094,233 48,198,499 RGD:1624291
RGD:1600115
G Perp PERP, TP53 apoptosis effector JBrowse link 1 14,224,392 14,236,838 RGD:1624291
RGD:13792537
focal adhesion assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn1 actinin, alpha 1 JBrowse link 6 103,376,557 103,470,497 RGD:1600115
RGD:1624291
G Actn2 actinin alpha 2 JBrowse link 17 66,304,530 66,397,647 RGD:1624291
RGD:1600115
G Actn3 actinin alpha 3 JBrowse link 1 220,120,532 220,136,460 RGD:1624291
G Ajuba ajuba LIM protein JBrowse link 15 33,208,210 33,218,456 RGD:1624291
RGD:1600115
G Arhgap6 Rho GTPase activating protein 6 JBrowse link X 26,314,561 26,845,242 RGD:1624291
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
RGD:1600115
G Bcr BCR activator of RhoGEF and GTPase JBrowse link 20 14,421,250 14,546,406 RGD:1624291
RGD:1600115
G Coro2b coronin 2B JBrowse link 8 67,374,617 67,492,490 RGD:1624291
RGD:1600115
G Cttn cortactin JBrowse link 1
1
217,602,698
215,255,385
217,638,196
215,290,882
RGD:10047281
G Dlc1 DLC1 Rho GTPase activating protein JBrowse link 16 58,776,489 59,247,752 RGD:1624291
G Fermt2 fermitin family member 2 JBrowse link 15 19,807,806 19,876,557 RGD:1624291
RGD:1600115
G Itga2 integrin subunit alpha 2 JBrowse link 2 46,996,904 47,097,011 RGD:8693310
G Pdpk1 3-phosphoinositide dependent protein kinase-1 JBrowse link 10 13,446,373 13,525,248 RGD:1581775
G Peak1 pseudopodium-enriched atypical kinase 1 JBrowse link 8 60,861,742 61,080,128 RGD:1600115
RGD:1624291
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha JBrowse link 2 196,227,669 196,270,949 RGD:1624291
RGD:1600115
G Ptk2b protein tyrosine kinase 2 beta JBrowse link 15 42,827,306 42,947,796 RGD:1581775
G Ptprk protein tyrosine phosphatase, receptor type, K JBrowse link 1 17,445,052 18,058,266 RGD:1624291
RGD:1600115
G Pxn paxillin JBrowse link 12 46,797,953 46,845,107 RGD:1624291
G Rcc2 regulator of chromosome condensation 2 JBrowse link 5 159,220,531 159,236,313 RGD:1624291
RGD:1600115
G Rhod ras homolog family member D JBrowse link 1 219,668,352 219,682,287 RGD:1624291
RGD:1600115
G Sorbs1 sorbin and SH3 domain containing 1 JBrowse link 1 259,373,921 259,502,108 RGD:1624291
RGD:1600115
G Taok2 TAO kinase 2 JBrowse link 1 198,301,789 198,354,601 RGD:1600115
RGD:1624291
G Tesk2 testis associated actin remodelling kinase 2 JBrowse link 5 135,574,172 135,659,842 RGD:727318
G Thy1 Thy-1 cell surface antigen JBrowse link 8 48,382,121 48,387,271 RGD:8553684
RGD:13792537
G Whamm WASP homolog associated with actin, golgi membranes and microtubules JBrowse link 1 143,401,986 143,430,356 RGD:1624291
RGD:1600115
gap junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctnna1 catenin alpha 1 JBrowse link 18 27,923,229 28,055,972 RGD:2289808
G Gja1 gap junction protein, alpha 1 JBrowse link 20 37,876,650 37,889,097 RGD:8554661
G Gja5 gap junction protein, alpha 5 JBrowse link 2 199,162,745 199,184,942 RGD:1624291
RGD:1600115
G Gjb2 gap junction protein, beta 2 JBrowse link 15 37,377,313 37,394,494 RGD:1624291
RGD:1600115
G Gjc1 gap junction protein, gamma 1 JBrowse link 10 90,781,408 90,912,440 RGD:1624291
RGD:1600115
G Gjd3 gap junction protein, delta 3 JBrowse link 10 86,888,982 86,891,915 RGD:1624291
RGD:1600115
G Pkp2 plakophilin 2 JBrowse link 11 88,912,163 88,972,213 RGD:6784510
hemidesmosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Col17a1 collagen type XVII alpha 1 chain JBrowse link 1 267,416,681 267,465,049 RGD:1624291
RGD:1600115
G Dst dystonin JBrowse link 9 37,902,336 38,296,961 RGD:1624291
RGD:13792537
G Itgb4 integrin subunit beta 4 JBrowse link 10 104,524,000 104,560,180 RGD:1600115
RGD:1624291
G Lama3 laminin subunit alpha 3 JBrowse link 18 3,704,866 3,941,215 RGD:633107
G Lamc1 laminin subunit gamma 1 JBrowse link 13 70,656,727 70,783,515 RGD:1624291
RGD:1600115
G Plec plectin JBrowse link 7 117,230,319 117,291,859 RGD:1600115
RGD:13792537
RGD:1624291
negative regulation of adherens junction organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rdx radixin JBrowse link 8 56,570,728 56,612,851 RGD:1624291
RGD:1600115
negative regulation of bicellular tight junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta JBrowse link 16 74,177,233 74,230,809 RGD:1600115
RGD:1624291
G Rock1 Rho-associated coiled-coil containing protein kinase 1 JBrowse link 18 1,273,490 1,390,790 RGD:1600115
RGD:1624291
G Rock2 Rho-associated coiled-coil containing protein kinase 2 JBrowse link 6 42,180,864 42,289,910 RGD:1600115
RGD:1624291
G Rps6 ribosomal protein S6 JBrowse link 5 105,197,821 105,200,681 RGD:11041641
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:1624291
negative regulation of focal adhesion assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acvrl1 activin A receptor like type 1 JBrowse link 7 142,769,942 142,787,336 RGD:1624291
RGD:1600115
G Apod apolipoprotein D JBrowse link 11 72,705,204 72,726,263 RGD:1600115
RGD:1624291
G Arhgap6 Rho GTPase activating protein 6 JBrowse link X 26,314,561 26,845,242 RGD:1624291
RGD:1600115
G Bcas3 BCAS3, microtubule associated cell migration factor JBrowse link 10 72,756,548 73,271,851 RGD:1624291
G Clasp2 cytoplasmic linker associated protein 2 JBrowse link 8 122,003,719 122,185,495 RGD:1624291
G Coro1c coronin 1C JBrowse link 12 48,481,741 48,554,054 RGD:1624291
RGD:1600115
G Dlc1 DLC1 Rho GTPase activating protein JBrowse link 16 58,776,489 59,247,752 RGD:1600115
RGD:1624291
G Dmtn dematin actin binding protein JBrowse link 15 52,292,762 52,320,385 RGD:1624291
RGD:1600115
G Dusp22 dual specificity phosphatase 22 JBrowse link 17 34,986,589 35,037,297 RGD:1600115
RGD:1624291
G Fam107a family with sequence similarity 107, member A JBrowse link 15 18,399,145 18,415,959 RGD:1600115
RGD:1624291
G Itgb1bp1 integrin subunit beta 1 binding protein 1 JBrowse link 6 43,348,927 43,363,633 RGD:1624291
RGD:1600115
G Lrp1 LDL receptor related protein 1 JBrowse link 7 70,846,313 70,927,028 RGD:13800550
G Mmp14 matrix metallopeptidase 14 JBrowse link 15 33,074,441 33,083,666 RGD:1582604
G Phldb2 pleckstrin homology-like domain, family B, member 2 JBrowse link 11 60,042,879 60,051,229 RGD:1624291
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:1624291
RGD:1600115
G Rcc2 regulator of chromosome condensation 2 JBrowse link 5 159,220,531 159,236,313 RGD:1624291
RGD:1600115
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:7248703
negative regulation of gap junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ace angiotensin I converting enzyme JBrowse link 10 94,170,766 94,213,831 RGD:1624291
RGD:1600115
G Mir23a microRNA 23a JBrowse link 19 25,318,582 25,318,656 RGD:13592600
paranodal junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ank2 ankyrin 2 JBrowse link 2 231,224,643 231,522,655 RGD:1599119
G Cd9 CD9 molecule JBrowse link 4 157,977,163 158,010,091 RGD:1624291
RGD:1600115
G Cntnap1 contactin associated protein 1 JBrowse link 10 89,087,904 89,103,615 RGD:6483326
RGD:1624291
RGD:1600115
G Epb41l3 erythrocyte membrane protein band 4.1-like 3 JBrowse link 9 117,314,935 117,666,408 RGD:1624291
G Gnpat glyceronephosphate O-acyltransferase JBrowse link 19 57,614,813 57,640,524 RGD:1624291
RGD:1600115
G Nfasc neurofascin JBrowse link 13 49,335,407 49,522,474 RGD:1624291
RGD:1600115
G Pmp22 peripheral myelin protein 22 JBrowse link 10 49,538,588 49,568,583 RGD:1624291
G Ugt8 UDP glycosyltransferase 8 JBrowse link 2 229,644,373 229,718,678 RGD:1624291
RGD:1600115
paranodal junction maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Whrn whirlin JBrowse link 5 79,235,541 79,317,206 RGD:1624291
RGD:1600115
positive regulation of adherens junction organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Add1 adducin 1 JBrowse link 14 81,367,466 81,426,610 RGD:1600115
RGD:13792537
RGD:1624291
G Arf6 ADP-ribosylation factor 6 JBrowse link 6 91,697,109 91,698,257 RGD:1600115
RGD:1624291
G Iqsec1 IQ motif and Sec7 domain 1 JBrowse link 4 123,400,717 123,454,656 RGD:1624291
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 JBrowse link 9 46,657,444 46,782,545 RGD:1624291
G Mapre2 microtubule-associated protein, RP/EB family, member 2 JBrowse link 18 14,814,149 15,780,290 RGD:1624291
G Ptpn23 protein tyrosine phosphatase, non-receptor type 23 JBrowse link 8 118,628,777 118,651,238 RGD:1600115
RGD:1624291
positive regulation of bicellular tight junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cldn1 claudin 1 JBrowse link 11 77,815,216 77,830,373 RGD:11341733
G Epha2 Eph receptor A2 JBrowse link 5 159,845,773 159,874,203 RGD:1600115
RGD:1624291
G Nphp1 nephrocystin 1 JBrowse link 3 120,316,048 120,370,089 RGD:1624291
G Nphp4 nephrocystin 4 JBrowse link 5 169,647,581 169,744,662 RGD:1624291
RGD:1600115
positive regulation of cell junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Flot1 flotillin 1 JBrowse link 20 3,427,890 3,438,418 RGD:1624291
RGD:1600115
positive regulation of focal adhesion assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase JBrowse link 3 10,041,820 10,145,076 RGD:1624291
G Cfl1 cofilin 1 JBrowse link 1 220,869,805 220,873,337 RGD:11570550
G Col16a1 collagen type XVI alpha 1 chain JBrowse link 5 148,257,030 148,311,645 RGD:1624291
RGD:13792537
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 JBrowse link 7 94,479,931 94,563,086 RGD:9685417
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 JBrowse link 13 35,622,472 35,673,449 RGD:1624291
RGD:1600115
G Fmn1 formin 1 JBrowse link 3 104,783,093 105,170,761 RGD:1624291
G Hrg histidine-rich glycoprotein JBrowse link 11 81,621,274 81,639,938 RGD:1600115
RGD:1624291
G Iqgap1 IQ motif containing GTPase activating protein 1 JBrowse link 1 142,525,041 142,615,673 RGD:11049552
G Itgb1bp1 integrin subunit beta 1 binding protein 1 JBrowse link 6 43,348,927 43,363,633 RGD:1624291
RGD:1600115
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:1624291
RGD:1600115
G Lims1 LIM zinc finger domain containing 1 JBrowse link 20 27,895,981 28,004,767 RGD:1624291
RGD:1600115
G LOC681544 similar to histidine-rich glycoprotein RGD:1600115
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 JBrowse link 9 46,657,444 46,782,545 RGD:1624291
G Myh9 myosin, heavy chain 9 JBrowse link 7 118,740,005 118,792,507 RGD:12798522
G Myoc myocilin JBrowse link 13 80,517,531 80,527,928 RGD:1600115
RGD:1624291
G Nrp1 neuropilin 1 JBrowse link 19 61,332,351 61,486,166 RGD:1624291
RGD:1600115
G Ppm1f protein phosphatase, Mg2+/Mn2+ dependent, 1F JBrowse link 11 88,313,709 88,343,726 RGD:1624291
RGD:1600115
G Ptprj protein tyrosine phosphatase, receptor type, J JBrowse link 3 79,233,519 79,390,956 RGD:1624291
RGD:1600115
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:1624291
RGD:1600115
G Rock1 Rho-associated coiled-coil containing protein kinase 1 JBrowse link 18 1,273,490 1,390,790 RGD:1600115
RGD:1624291
G S100a10 S100 calcium binding protein A10 JBrowse link 2 193,892,589 193,901,236 RGD:1624291
RGD:1600115
G Sdc4 syndecan 4 JBrowse link 3 160,872,503 160,891,190 RGD:2312327
G Smad3 SMAD family member 3 JBrowse link 8 68,569,530 68,678,349 RGD:2300418
G Tek TEK receptor tyrosine kinase JBrowse link 5 113,725,717 113,852,799 RGD:1624291
RGD:1600115
G Thy1 Thy-1 cell surface antigen JBrowse link 8 48,382,121 48,387,271 RGD:1624291
RGD:12793016
G Tsc1 TSC complex subunit 1 JBrowse link 3 7,219,955 7,269,063 RGD:1624291
RGD:1600115
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:1624291
RGD:1600115
G Wnt4 Wnt family member 4 JBrowse link 5 155,649,238 155,668,065 RGD:1624291
RGD:1600115
positive regulation of focal adhesion disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dusp3 dual specificity phosphatase 3 JBrowse link 10 89,904,578 89,918,296 RGD:1624291
positive regulation of gap junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ace2 angiotensin I converting enzyme 2 JBrowse link X 32,050,734 32,095,860 RGD:1624291
RGD:1600115
G Agt angiotensinogen JBrowse link 19 57,321,594 57,333,460 RGD:1624291
RGD:1600115
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:1624291
RGD:1600115
positive regulation of tight junction disassembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc8 ATP binding cassette subfamily C member 8 JBrowse link 1 102,110,708 102,191,287 RGD:12791991
G Tgfb3 transforming growth factor, beta 3 JBrowse link 6 109,913,757 109,936,217 RGD:1624291
RGD:1600115
G Tgfbr1 transforming growth factor, beta receptor 1 JBrowse link 5 63,056,071 63,119,635 RGD:1624291
regulation of bicellular tight junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fzd5 frizzled class receptor 5 JBrowse link 9 71,443,784 71,445,541 RGD:1624291
RGD:1600115
G Gja1 gap junction protein, alpha 1 JBrowse link 20 37,876,650 37,889,097 RGD:6784505
G Gpbar1 G protein-coupled bile acid receptor 1 JBrowse link 9 81,555,914 81,560,931 RGD:1624291
RGD:1600115
G Myo1c myosin 1C JBrowse link 10 63,803,311 63,819,614 RGD:1624291
RGD:1600115
G Nedd4l neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase JBrowse link 18 60,392,376 60,719,720 RGD:1624291
G Pkp2 plakophilin 2 JBrowse link 11 88,912,163 88,972,213 RGD:6784505
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 25,095,089 25,118,869 RGD:1624291
RGD:1600115
G Prkch protein kinase C, eta JBrowse link 6 96,479,243 96,677,368 RGD:1624291
RGD:1600115
G Snai1 snail family transcriptional repressor 1 JBrowse link 3 164,274,710 164,279,199 RGD:1624291
RGD:1600115
G Snai2 snail family transcriptional repressor 2 JBrowse link 11 90,404,421 90,406,730 RGD:1624291
regulation of cell junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rap1a RAP1A, member of RAS oncogene family JBrowse link 2 208,193,950 208,215,186 RGD:1624291
RGD:1600115
G Rap1b RAP1B, member of RAS oncogene family JBrowse link 7 60,850,406 60,878,226 RGD:1624291
RGD:1600115
G Rapgef1 Rap guanine nucleotide exchange factor 1 JBrowse link 3 8,189,594 8,307,077 RGD:1624291
RGD:1600115
G Rapgef2 Rap guanine nucleotide exchange factor 2 JBrowse link 2 177,836,191 178,057,378 RGD:1600115
RGD:1624291
G Rock1 Rho-associated coiled-coil containing protein kinase 1 JBrowse link 18 1,273,490 1,390,790 RGD:13792537
G Rock2 Rho-associated coiled-coil containing protein kinase 2 JBrowse link 6 42,180,864 42,289,910 RGD:13792537
regulation of focal adhesion assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 JBrowse link 12 2,133,935 2,157,403 RGD:1624291
RGD:1600115
G Clasp1 cytoplasmic linker associated protein 1 JBrowse link 13 34,365,038 34,584,651 RGD:1624291
RGD:1600115
G Coro1c coronin 1C JBrowse link 12 48,481,741 48,554,054 RGD:1624291
G Dapk3 death-associated protein kinase 3 JBrowse link 7 11,392,436 11,400,855 RGD:1624291
RGD:1600115
G Dusp3 dual specificity phosphatase 3 JBrowse link 10 89,904,578 89,918,296 RGD:1624291
G Efna5 ephrin A5 JBrowse link 9 110,054,002 110,329,878 RGD:1624291
RGD:1600115
G Epha3 Eph receptor A3 JBrowse link 11 421,253 783,037 RGD:1600115
RGD:1624291
G Gpm6b glycoprotein m6b JBrowse link X 29,604,607 29,751,174 RGD:1600115
RGD:1624291
G Grem1 gremlin 1, DAN family BMP antagonist JBrowse link 3 105,203,309 105,214,989 RGD:1624291
RGD:1600115
G Ldb1 LIM domain binding 1 JBrowse link 1 265,772,729 265,798,442 RGD:1624291
RGD:1600115
G Limch1 LIM and calponin homology domains 1 JBrowse link 14 42,760,363 43,072,976 RGD:1624291
G Macf1 microtubule-actin crosslinking factor 1 JBrowse link 5 141,039,455 141,363,524 RGD:1600115
RGD:13792537
RGD:1624291
G Peak1 pseudopodium-enriched atypical kinase 1 JBrowse link 8 60,861,742 61,080,128 RGD:1600115
RGD:1624291
G Ptk2 protein tyrosine kinase 2 JBrowse link 7 114,436,419 114,611,317 RGD:1600115
RGD:1624291
G Rhod ras homolog family member D JBrowse link 1 219,668,352 219,682,287 RGD:1624291
RGD:1600115
G Slk STE20-like kinase JBrowse link 1 267,359,761 267,415,735 RGD:1600115
RGD:1624291
G Tsc1 TSC complex subunit 1 JBrowse link 3 7,219,955 7,269,063 RGD:1601406
G Wdpcp WD repeat containing planar cell polarity effector JBrowse link 14 106,393,959 106,759,511 RGD:1624291
RGD:1600115
slit diaphragm assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ptpro protein tyrosine phosphatase, receptor type, O JBrowse link 4 171,250,766 171,461,571 RGD:1624291
RGD:1600115
tight junction organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cldn19 claudin 19 JBrowse link 5 138,300,692 138,307,982 RGD:1624291
RGD:1600115
G Cldn9 claudin 9 JBrowse link 10 13,003,010 13,004,441 RGD:1624291
RGD:1600115
tricellular tight junction assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lsr lipolysis stimulated lipoprotein receptor JBrowse link 1 89,383,515 89,399,041 RGD:1624291
RGD:1600115
zonula adherens assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abi2 abl-interactor 2 JBrowse link 9 67,234,612 67,284,504 RGD:1624291
G Dlg5 discs large MAGUK scaffold protein 5 JBrowse link 15 120,213 230,312 RGD:1624291
RGD:1600115
zonula adherens maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 JBrowse link 12 2,133,935 2,157,403 RGD:1624291
RGD:1600115
G Kifc3 kinesin family member C3 JBrowse link 19 10,305,405 10,339,186 RGD:1624291
RGD:1600115
G Plekha7 pleckstrin homology domain containing A7 JBrowse link 1 185,427,600 185,493,985 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17926
    cellular component organization or biogenesis 6227
      cellular component organization 6054
        cell junction organization 265
          adherens junction organization + 128
          cell junction assembly + 218
          cell junction maintenance + 18
          cell-cell junction organization + 153
          flagellum attachment zone organization 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.