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ONTOLOGY REPORT - ANNOTATIONS


Term:response to interferon-gamma
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Accession:GO:0034341 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon.
Synonyms:exact_synonym: response to immune interferon;   response to type II IFN;   response to type II interferon


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response to interferon-gamma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07015596.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr14:65,152,594...65,153,013 JBrowse link
G AABR07021463.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr13:73,661,131...73,661,553 JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 IEP RGD PMID:18433458 RGD:2315954 NCBI chr 3:5,519,921...5,558,390
Ensembl chr 3:5,519,990...5,558,166
JBrowse link
G Bst2 bone marrow stromal cell antigen 2 ISO
ISS
(MGI:MGI:5448513|PMID:21919738)
GO_REF:0000024
RGD
UniProt
PMID:21919738 GO_REF:0000024, MGI:MGI:5448513 NCBI chr16:19,938,781...19,942,353
Ensembl chr16:19,938,784...19,942,353
JBrowse link
G Calcoco2 calcium binding and coiled-coil domain 2 ISO (PMID:9230084) RGD PMID:9230084 NCBI chr10:83,935,087...83,963,750 JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IDA PMID:10477596 BHF-UCL PMID:10477596 RGD:8553666 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315
JBrowse link
G Cd40 CD40 molecule IEP
IBA
with tumor necrosis factor alpha
PMID:21873635
RGD
GO_Central
PMID:10403401, PMID:21873635 RGD:634252, RGD:13792537 NCBI chr 3:161,519,789...161,534,943
Ensembl chr 3:161,519,743...161,534,704
JBrowse link
G Cd86 CD86 molecule IEP RGD PMID:16839612 RGD:2313438 NCBI chr11:67,060,305...67,117,990
Ensembl chr11:67,082,193...67,118,795
JBrowse link
G Ciita class II, major histocompatibility complex, transactivator ISO (MGI:MGI:3621255|PMID:16280321)
(PMID:19041327)
RGD PMID:16280321, PMID:19041327 MGI:MGI:3621255 NCBI chr10:5,212,621...5,260,641
Ensembl chr10:5,213,350...5,260,608
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 ISO
ISS
(MGI:MGI:1312962|PMID:9811838)
GO_REF:0000024
RGD
UniProt
PMID:9811838 GO_REF:0000024, MGI:MGI:1312962 NCBI chr  X:72,128,996...72,133,692
Ensembl chr  X:72,128,994...72,133,692
JBrowse link
G Cxcl16 C-X-C motif chemokine ligand 16 ISO (PMID:18373975) RGD PMID:18373975 NCBI chr10:57,060,005...57,064,600
Ensembl chr10:57,060,007...57,064,600
JBrowse link
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 ISO (PMID:9282826) RGD PMID:9282826 NCBI chr 7:70,333,150...70,340,006
Ensembl chr 7:70,335,061...70,340,005
JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 ISO (PMID:11679576) RGD PMID:11679576 NCBI chr10:11,059,701...11,085,186
Ensembl chr10:11,060,313...11,085,210
JBrowse link
G Gch1 GTP cyclohydrolase 1 ISO (PMID:12607127), (PMID:7678411), (PMID:9445252) RGD PMID:7678411, PMID:9445252, PMID:12607127 NCBI chr15:23,935,011...23,968,971
Ensembl chr15:23,934,585...23,969,011
JBrowse link
G Hmgb1 high mobility group box 1 IMP RGD PMID:18004227 RGD:2316773 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:213,765,825...213,767,841
Ensembl chr 1:213,766,758...213,767,815
JBrowse link
G Ifitm2 interferon induced transmembrane protein 2 ISO
IBA
(PMID:21253575)
PMID:21873635
RGD PMID:21253575, PMID:21873635 RGD:13792537 NCBI chr 1:213,750,219...213,751,399
Ensembl chr 1:213,750,192...213,751,405
JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 ISO
IBA
(PMID:21253575)
PMID:21873635
RGD PMID:21253575, PMID:21873635 RGD:13792537 NCBI chr 1:213,810,712...213,811,821
Ensembl chr 1:213,810,696...213,811,901
JBrowse link
G Ifitm6 interferon induced transmembrane protein 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:213,816,966...213,856,570
Ensembl chr 1:213,817,312...213,818,222
JBrowse link
G Il23r interleukin 23 receptor ISO (PMID:12023369) RGD PMID:12023369 NCBI chr 4:98,203,788...98,306,729
Ensembl chr 4:98,203,958...98,305,173
JBrowse link
G Kynu kynureninase ISO (PMID:9291104) RGD PMID:9291104 NCBI chr 3:28,416,926...28,566,939
Ensembl chr 3:28,416,954...28,566,928
JBrowse link
G Mefv MEFV innate immuity regulator, pyrin ISO
ISS
(PMID:26347139)
GO_REF:0000024
RGD
UniProt
PMID:26347139 GO_REF:0000024 NCBI chr10:12,045,813...12,056,229
Ensembl chr10:12,046,541...12,056,311
JBrowse link
G Nub1 negative regulator of ubiquitin-like proteins 1 ISO (PMID:16707496) RGD PMID:16707496 NCBI chr 4:6,950,870...6,981,400
Ensembl chr 4:6,951,478...6,978,073
JBrowse link
G RGD1561738 similar to interferon induced transmembrane protein 2 (1-8D) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:73,661,005...73,661,699 JBrowse link
G RGD1565332 similar to interferon induced transmembrane protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:65,152,594...65,153,013 JBrowse link
G RT1-Ba RT1 class II, locus Ba ISO
IEA
(MGI:MGI:5009185|PMID:11465104)
GO_REF:0000107
RGD
Ensembl
PMID:11465104 GO_REF:0000107, MGI:MGI:5009185 NCBI chr20:4,066,133...4,070,726
Ensembl chr20:4,066,132...4,070,721
JBrowse link
G RT1-Db1 RT1 class II, locus Db1 ISO (MGI:MGI:5009185|PMID:11465104) RGD PMID:11465104 MGI:MGI:5009185 NCBI chr20:4,087,621...4,097,190
Ensembl chr20:4,087,618...4,097,190
JBrowse link
G Sec61a1 SEC61 translocon subunit alpha 1 IEP RGD PMID:16604358 RGD:2312768 NCBI chr 4:120,453,577...120,467,932
Ensembl chr 4:120,453,581...120,467,932
JBrowse link
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:26735137)
Ensembl
UniProt
RGD
PMID:26735137 GO_REF:0000024, GO_REF:0000107 NCBI chr 8:21,890,214...21,896,045
Ensembl chr 8:21,890,319...21,896,031
JBrowse link
G Slc11a1 solute carrier family 11 member 1 ISO
IEA
(MGI:MGI:1095423|PMID:9261342)
GO_REF:0000107
RGD
Ensembl
PMID:9261342 GO_REF:0000107, MGI:MGI:1095423 NCBI chr 9:81,655,590...81,666,697
Ensembl chr 9:81,655,629...81,666,706
JBrowse link
G Slc30a8 solute carrier family 30 member 8 IEP RGD PMID:19243577 RGD:2315023 NCBI chr 7:91,832,988...91,869,329
Ensembl chr 7:91,832,988...91,867,300
JBrowse link
G Snca synuclein alpha ISO (PMID:19157893) RGD PMID:19157893 NCBI chr 4:90,782,412...90,883,236
Ensembl chr 4:90,782,374...90,882,285
JBrowse link
G Sp100 SP100 nuclear antigen ISO (PMID:8810287), (PMID:9230084) RGD PMID:8810287, PMID:9230084 NCBI chr 9:92,675,103...92,718,489
Ensembl chr 9:92,681,078...92,717,929
JBrowse link
G Trim21 tripartite motif-containing 21 ISO (PMID:26347139) RGD PMID:26347139 NCBI chr 1:167,686,148...167,708,735
Ensembl chr 1:167,686,173...167,708,714
JBrowse link
G Ubd ubiquitin D IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:16782901)
(PMID:17889673)
Ensembl
RGD
PMID:16782901, PMID:17889673, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr20:1,876,175...1,878,126
Ensembl chr20:1,876,173...1,897,814
JBrowse link
cellular response to interferon-gamma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 ISO (MGI:MGI:5489057|PMID:19014335) RGD PMID:19014335 MGI:MGI:5489057 NCBI chr15:93,612,968...93,622,322
Ensembl chr15:93,612,971...93,622,358
JBrowse link
G Actg1 actin, gamma 1 ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr10:109,518,429...109,521,288
Ensembl chr 3:75,643,054...75,644,954
Ensembl chr10:75,643,054...75,644,954
JBrowse link
G Actr2 actin related protein 2 ISO MGI:MGI:1921367 (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr14:104,338,486...104,375,840
Ensembl chr14:104,340,434...104,375,649
JBrowse link
G Actr3 actin related protein 3 ISO
IEA
MGI:MGI:1913963 (MGI:MGI:3828867|PMID:19144319)
GO_REF:0000107
RGD
Ensembl
PMID:19144319 GO_REF:0000107, MGI:MGI:3828867 NCBI chr13:41,695,520...41,738,622
Ensembl chr13:41,695,183...41,738,658
JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 IEP RGD PMID:18433458 RGD:2315954 NCBI chr 3:5,519,921...5,558,390
Ensembl chr 3:5,519,990...5,558,166
JBrowse link
G Aif1 allograft inflammatory factor 1 IEP
ISO
PMID:7769138
(PMID:9614071)
RGD PMID:9614071, PMID:7769138 RGD:61535 NCBI chr20:5,161,350...5,167,176
Ensembl chr20:5,161,333...5,166,448
JBrowse link
G Aqp4 aquaporin 4 ISO
IEA
(PMID:17645239)
GO_REF:0000107
RGD
Ensembl
PMID:17645239 GO_REF:0000107 NCBI chr18:6,766,009...6,782,757
Ensembl chr18:6,765,945...6,782,996
JBrowse link
G Arg2 arginase 2 IEP RGD PMID:11250887 RGD:4144048 NCBI chr 6:102,311,097...102,338,406
Ensembl chr 6:102,311,116...102,338,520
JBrowse link
G Asl argininosuccinate lyase IEP with TNFalpha RGD PMID:11072090 RGD:4139899 NCBI chr12:30,160,922...30,178,348
Ensembl chr12:30,165,694...30,178,341
JBrowse link
G Ass1 argininosuccinate synthase 1 IEP with TNFalpha RGD PMID:12589771, PMID:11072090 RGD:1599307, RGD:4139899 NCBI chr 3:10,327,411...10,375,847
Ensembl chr 3:10,327,414...10,375,826
JBrowse link
G Capg capping actin protein, gelsolin like ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr 4:100,395,693...100,419,447
Ensembl chr 4:100,407,658...100,419,446
JBrowse link
G Casp1 caspase 1 ISO (PMID:11536016) RGD PMID:11536016 NCBI chr 8:2,605,743...2,614,637
Ensembl chr 8:2,604,962...2,614,631
JBrowse link
G Ccl1 C-C motif chemokine ligand 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:69,534,976...69,537,836
Ensembl chr10:69,534,933...69,537,882
JBrowse link
G Ccl11 C-C motif chemokine ligand 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:69,434,965...69,439,566
Ensembl chr10:69,434,941...69,439,575
JBrowse link
G Ccl12 chemokine (C-C motif) ligand 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:69,476,866...69,478,416
Ensembl chr10:69,476,775...69,478,462
JBrowse link
G Ccl17 C-C motif chemokine ligand 17 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,619,220...10,620,671
Ensembl chr19:10,619,220...10,620,671
JBrowse link
G Ccl19 C-C motif chemokine ligand 19 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:58,181,025...58,182,969
Ensembl chr 5:58,181,026...58,183,017
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IEP
IBA
ISO
PMID:21873635
(PMID:9407497)
(MGI:MGI:3699670|PMID:14662900)
RGD PMID:9407497, PMID:14662900, PMID:14512159, PMID:21873635 MGI:MGI:3699670, RGD:8548859, RGD:13792537 NCBI chr10:69,412,065...69,413,863
Ensembl chr10:69,412,017...69,413,870
JBrowse link
G Ccl20 C-C motif chemokine ligand 20 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:88,918,359...88,921,017
Ensembl chr 9:88,918,433...88,921,001
JBrowse link
G Ccl21 C-C motif chemokine ligand 21 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:58,197,678...58,198,782
Ensembl chr 5:58,197,680...58,198,782
JBrowse link
G Ccl22 C-C motif chemokine ligand 22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,674,189...10,681,145
Ensembl chr19:10,674,189...10,681,145
JBrowse link
G Ccl24 C-C motif chemokine ligand 24 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:24,131,529...24,152,626
Ensembl chr12:24,148,567...24,152,625
JBrowse link
G Ccl25 C-C motif chemokine ligand 25 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:2,429,492...2,438,928
Ensembl chr12:2,429,509...2,438,817
JBrowse link
G Ccl26 C-C motif chemokine ligand 26 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:24,157,182...24,161,870
Ensembl chr12:24,158,766...24,161,869
JBrowse link
G Ccl3 C-C motif chemokine ligand 3 ISO
IBA
(PMID:9407497)
PMID:21873635
RGD PMID:9407497, PMID:21873635 RGD:13792537 NCBI chr10:70,869,516...70,871,066
Ensembl chr10:70,869,513...70,871,066
JBrowse link
G Ccl4 C-C motif chemokine ligand 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:70,870,926...70,886,357
Ensembl chr10:70,884,531...70,886,355
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO
IEA
IBA
(PMID:9407497)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:9407497, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315
JBrowse link
G Ccl6 chemokine (C-C motif) ligand 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:70,798,118...70,802,750
Ensembl chr10:70,797,124...70,802,782
JBrowse link
G Ccl7 C-C motif chemokine ligand 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:69,423,083...69,424,933
Ensembl chr10:69,423,086...69,424,979
JBrowse link
G Ccl9 chemokine (C-C motif) ligand 9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:70,783,426...70,788,372
Ensembl chr10:70,783,424...70,788,309
JBrowse link
G Cd47 Cd47 molecule IMP PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr11:53,511,485...53,575,754
Ensembl chr11:53,514,595...53,575,175
JBrowse link
G Cdc42 cell division cycle 42 ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300
JBrowse link
G Cdc42ep2 CDC42 effector protein 2 ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr 1:221,272,349...221,281,252
Ensembl chr 1:221,272,353...221,281,180
JBrowse link
G Cdc42ep4 CDC42 effector protein 4 ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr10:102,244,680...102,269,272
Ensembl chr10:102,244,681...102,269,272
JBrowse link
G Cfh complement factor H IEP RGD PMID:12121434 RGD:632369 NCBI chr13:56,979,155...57,080,540
Ensembl chr13:56,978,607...57,080,622
JBrowse link
G Ciita class II, major histocompatibility complex, transactivator IEP RGD PMID:11071855 RGD:632488 NCBI chr10:5,212,621...5,260,641
Ensembl chr10:5,213,350...5,260,608
JBrowse link
G Cldn1 claudin 1 IEP RGD PMID:18768927 RGD:11344890 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,644,267...10,654,861
Ensembl chr19:10,644,244...10,653,800
JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 IEP RGD PMID:12121434 RGD:632369
G Dapk1 death associated protein kinase 1 ISO (PMID:18995835)
(MGI:MGI:5466658|PMID:23071094)
RGD PMID:18995835, PMID:23071094 MGI:MGI:5466658 NCBI chr17:4,297,038...4,454,941
Ensembl chr17:4,297,224...4,454,778
JBrowse link
G Dapk3 death-associated protein kinase 3 ISO (PMID:18995835)
(MGI:MGI:5466658|PMID:23071094)
RGD PMID:18995835, PMID:23071094 MGI:MGI:5466658 NCBI chr 7:11,392,436...11,400,855
Ensembl chr 7:11,392,437...11,400,805
JBrowse link
G Edn1 endothelin 1 IEP RGD PMID:22301113 RGD:8662301 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Eprs glutamyl-prolyl-tRNA synthetase ISO (MGI:MGI:5466658|PMID:23071094)
(PMID:15479637)
RGD PMID:15479637, PMID:23071094 MGI:MGI:5466658 NCBI chr13:103,300,911...103,371,651
Ensembl chr13:103,300,932...103,371,577
JBrowse link
G Evl Enah/Vasp-like ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr 6:132,470,283...132,590,242
Ensembl chr 6:132,510,757...132,590,241
JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:10029626 RGD:14700709 NCBI chr 1:252,589,785...252,624,790
Ensembl chr 1:252,589,785...252,624,790
JBrowse link
G Faslg Fas ligand IEP RGD PMID:10029626 RGD:14700709 NCBI chr13:79,696,811...79,717,581
Ensembl chr13:79,698,445...79,705,705
JBrowse link
G Fcar Fc fragment of IgA receptor ISO (PMID:25339672) RGD PMID:25339672 NCBI chr 1:73,230,392...73,263,462
Ensembl chr 1:73,230,390...73,264,302
JBrowse link
G Flnb filamin B ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr15:18,750,152...18,883,019
Ensembl chr15:18,750,118...18,883,005
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase ISO (PMID:15479637) RGD PMID:15479637 NCBI chr 4:157,676,336...157,680,322
Ensembl chr 4:157,676,595...157,679,962
JBrowse link
G Gbp1 guanylate binding protein 1 ISO
IBA
(MGI:MGI:4412460|PMID:18025219)
PMID:21873635
(PMID:17266443), (PMID:21151871)
RGD PMID:17266443, PMID:18025219, PMID:21151871, PMID:21873635 MGI:MGI:4412460, RGD:13792537 NCBI chr 2:248,343,334...248,423,402
Ensembl chr 2:248,398,917...248,409,570
JBrowse link
G Gbp2 guanylate binding protein 2 ISO
IBA
IEA
(MGI:MGI:4412460|PMID:18025219)
PMID:21873635
(PMID:17266443)
GO_REF:0000107
RGD
Ensembl
PMID:17266443, PMID:18025219, PMID:21873635 GO_REF:0000107, MGI:MGI:4412460, RGD:13792537 NCBI chr 2:248,276,795...248,293,784
Ensembl chr 2:248,276,709...248,293,784
JBrowse link
G Gbp3 guanylate binding protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:248,450,908...248,491,258
Ensembl chr 2:248,451,547...248,484,100
JBrowse link
G Gbp4 guanylate binding protein 4 IBA
ISO
PMID:21873635
(MGI:MGI:4412460|PMID:18025219)
(PMID:17266443)
RGD PMID:17266443, PMID:18025219, PMID:21873635 MGI:MGI:4412460, RGD:13792537 NCBI chr 2:248,249,232...248,263,104
Ensembl chr 2:248,249,468...248,263,168
JBrowse link
G Gbp5 guanylate binding protein 5 ISO
IBA
(MGI:MGI:4412460|PMID:18025219)
PMID:21873635
(PMID:17266443)
RGD PMID:17266443, PMID:18025219, PMID:21873635 MGI:MGI:4412460, RGD:13792537 NCBI chr 2:248,178,441...248,196,873
Ensembl chr 2:248,178,389...248,197,160
JBrowse link
G Gbp6 guanylate binding protein family member 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:5,927,568...5,954,923
Ensembl chr14:5,928,737...5,945,321
JBrowse link
G Gsn gelsolin ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr 3:14,456,106...14,508,922
Ensembl chr 3:14,467,330...14,508,911
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:7865494 RGD:11520781 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059
JBrowse link
G Il12b interleukin 12B ISO (MGI:MGI:4412460|PMID:18025219) RGD PMID:18025219 MGI:MGI:4412460 NCBI chr10:30,034,447...30,048,774
Ensembl chr10:30,038,709...30,048,085
JBrowse link
G Il12rb1 interleukin 12 receptor subunit beta 1 ISO (PMID:12023369) RGD PMID:12023369 NCBI chr16:20,370,722...20,383,576
Ensembl chr16:20,371,338...20,383,337
JBrowse link
G Il18 interleukin 18 IEP RGD PMID:18547159 RGD:4889457 NCBI chr 8:55,009,666...55,016,286
Ensembl chr 8:54,993,859...55,016,299
JBrowse link
G Irf8 interferon regulatory factor 8 ISO (PMID:25122610) RGD PMID:25122610 NCBI chr19:54,314,859...54,336,643
Ensembl chr19:54,314,865...54,336,640
JBrowse link
G Irgm immunity-related GTPase M ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr10:34,213,885...34,221,968
Ensembl chr10:34,213,936...34,221,928
JBrowse link
G Kif16b kinesin family member 16B ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr 3:136,596,621...136,936,809
Ensembl chr 3:136,657,480...136,936,674
JBrowse link
G Kif5b kinesin family member 5B ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr17:54,181,416...54,219,048
Ensembl chr17:54,181,419...54,212,096
JBrowse link
G Lgals9 galectin 9 ISO (PMID:23817958) RGD PMID:23817958 NCBI chr10:64,737,022...64,760,195
Ensembl chr10:64,737,022...64,760,201
JBrowse link
G LOC103690086 uncharacterized LOC103690086 ISO (MGI:MGI:4412460|PMID:18025219) RGD PMID:18025219 MGI:MGI:4412460 NCBI chr14:5,642,357...5,646,406 JBrowse link
G LOC685067 similar to guanylate binding protein family, member 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:248,215,324...248,241,278
Ensembl chr 2:248,219,428...248,239,899
JBrowse link
G Mrc1 mannose receptor, C type 1 ISO (MGI:MGI:5486412|PMID:22832163) RGD PMID:22832163 MGI:MGI:5486412 NCBI chr17:81,352,700...81,433,743
Ensembl chr17:81,352,700...81,433,743
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:7524476 RGD:10059620 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Myo18a myosin XVIIIa ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr10:64,979,770...65,080,535
Ensembl chr10:64,979,770...65,080,535
JBrowse link
G Myo1c myosin 1C ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr10:63,803,311...63,819,614
Ensembl chr10:63,803,309...63,819,614
JBrowse link
G Nos2 nitric oxide synthase 2 ISO
IEA
(MGI:MGI:4412460|PMID:18025219)
GO_REF:0000107
RGD
Ensembl
PMID:18025219 GO_REF:0000107, MGI:MGI:4412460 NCBI chr10:66,188,290...66,221,621
Ensembl chr10:66,189,786...66,313,190
JBrowse link
G Pde12 phosphodiesterase 12 IEA
ISO
GO_REF:0000107
(PMID:15231837)
Ensembl
RGD
PMID:15231837 GO_REF:0000107 NCBI chr16:2,357,028...2,367,069
Ensembl chr16:2,357,028...2,367,253
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 IEP RGD PMID:18466611 RGD:2311658 NCBI chr10:94,850,971...94,913,202 JBrowse link
G Rab11fip5 RAB11 family interacting protein 5 ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr 4:117,113,067...117,154,495
Ensembl chr 4:117,115,076...117,153,907
JBrowse link
G Rab12 RAB12, member RAS oncogene family ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr 9:114,683,985...114,709,613
Ensembl chr 9:114,684,039...114,709,546
JBrowse link
G Rab20 RAB20, member RAS oncogene family ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr16:83,358,116...83,382,326
Ensembl chr16:83,358,116...83,382,326
JBrowse link
G Rab43 RAB43, member RAS oncogene family ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr 4:119,695,012...119,714,490
Ensembl chr 4:119,695,013...119,714,302
JBrowse link
G Rab7b Rab7b, member RAS oncogene family ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr13:48,456,143...48,483,714
Ensembl chr13:48,455,923...48,482,138
JBrowse link
G Rpl13a ribosomal protein L13A ISO (PMID:15479637)
(MGI:MGI:5466658|PMID:23071094)
RGD PMID:15479637, PMID:23071094 MGI:MGI:5466658 NCBI chr 1:101,120,325...101,123,401
Ensembl chr 1:101,120,325...101,123,402
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 ISO (MGI:MGI:5913528|PMID:28178239) RGD PMID:28178239 MGI:MGI:5913528 NCBI chr10:73,824,200...73,865,503
Ensembl chr10:73,824,202...73,865,364
JBrowse link
G RT1-Bb RT1 class II, locus Bb IEA
ISO
GO_REF:0000107
(MGI:MGI:4942269|PMID:9244347), (MGI:MGI:4942274|PMID:7691725), (MGI:MGI:4942276|PMID:2502420), (MGI:MGI:4942277|PMID:2493384), (MGI:MGI:4943415|PMID:1845803)
Ensembl
RGD
PMID:1845803, PMID:2493384, PMID:2502420, PMID:7691725, PMID:9244347 GO_REF:0000107, MGI:MGI:4942269, MGI:MGI:4942274, MGI:MGI:4942276, MGI:MGI:4942277, MGI:MGI:4943415 NCBI chr20:4,043,726...4,049,367
Ensembl chr20:4,039,413...4,049,711
JBrowse link
G RT1-Ha RT1 class II, locus Ha ISO (PMID:8568247) RGD PMID:8568247 NCBI chr20:3,875,478...3,885,140
Ensembl chr20:3,875,706...3,881,461
JBrowse link
G Serpina3n serine (or cysteine) peptidase inhibitor, clade A, member 3N IEP RGD PMID:7619083 RGD:5147424 NCBI chr 6:128,073,344...128,080,878
Ensembl chr 6:127,941,526...128,080,889
JBrowse link
G Sirpa signal-regulatory protein alpha IMP PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr 3:122,113,735...122,152,478
Ensembl chr 3:122,114,108...122,152,477
JBrowse link
G Slc26a6 solute carrier family 26 member 6 ISO (PMID:18655181) RGD PMID:18655181 NCBI chr 8:117,648,792...117,659,376
Ensembl chr 8:117,648,745...117,659,804
JBrowse link
G Star steroidogenic acute regulatory protein IEP RGD PMID:9564825 RGD:4891971 NCBI chr16:71,036,204...71,040,847
Ensembl chr16:71,036,204...71,040,847
JBrowse link
G Stat1 signal transducer and activator of transcription 1 ISO (PMID:23386060) RGD PMID:23386060 NCBI chr 9:54,287,540...54,327,958
Ensembl chr 9:54,287,541...54,484,533
JBrowse link
G Stx11 syntaxin 11 ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr 1:7,039,160...7,064,870
Ensembl chr 1:7,039,162...7,064,870
JBrowse link
G Stx4 syntaxin 4 ISO
IEA
(MGI:MGI:3828867|PMID:19144319)
GO_REF:0000107
RGD
Ensembl
PMID:19144319 GO_REF:0000107, MGI:MGI:3828867 NCBI chr 1:199,287,384...199,295,606
Ensembl chr 1:199,287,710...199,294,979
JBrowse link
G Stx8 syntaxin 8 ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr10:54,512,922...54,753,302
Ensembl chr10:54,512,983...54,753,302
JBrowse link
G Stxbp1 syntaxin binding protein 1 ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr 3:11,823,779...11,885,479
Ensembl chr 3:11,823,785...11,885,417
JBrowse link
G Stxbp2 syntaxin binding protein 2 ISO
IEA
(MGI:MGI:3828867|PMID:19144319)
GO_REF:0000107
RGD
Ensembl
PMID:19144319 GO_REF:0000107, MGI:MGI:3828867 NCBI chr12:2,180,101...2,191,863
Ensembl chr12:2,180,150...2,191,175
JBrowse link
G Stxbp3 syntaxin binding protein 3 ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr 2:211,595,763...211,638,756
Ensembl chr 2:211,595,659...211,638,788
JBrowse link
G Stxbp4 syntaxin binding protein 4 ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr10:78,005,745...78,168,641
Ensembl chr10:78,009,338...78,168,609
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein IEA
ISO
GO_REF:0000107
(PMID:15479637)
Ensembl
RGD
PMID:15479637 GO_REF:0000107 NCBI chr 8:96,100,692...96,266,342
Ensembl chr 8:96,105,025...96,266,342
JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 ISO (PMID:17720976) RGD PMID:17720976 NCBI chr 8:119,215,266...119,220,909
Ensembl chr 8:119,215,495...119,219,232
JBrowse link
G Tlr2 toll-like receptor 2 ISO (PMID:11672593) RGD PMID:11672593 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
G Tlr3 toll-like receptor 3 NOT IEP intestinal epithelial cells
thyrocytes
RGD PMID:16638093, PMID:15661832 RGD:5128794, RGD:5128798 NCBI chr16:50,016,466...50,031,011
Ensembl chr16:50,016,857...50,031,214
JBrowse link
G Tlr4 toll-like receptor 4 ISO
IEA
(PMID:11672593)
GO_REF:0000107
RGD
Ensembl
PMID:11672593 GO_REF:0000107 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Tnf tumor necrosis factor IEP RGD PMID:16525716 RGD:14985246 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Vamp3 vesicle-associated membrane protein 3 ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr 5:168,126,157...168,136,628
Ensembl chr 5:168,126,157...168,136,666
JBrowse link
G Vamp4 vesicle-associated membrane protein 4 ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr13:80,460,699...80,483,597
Ensembl chr13:80,460,694...80,483,600
JBrowse link
G Vamp8 vesicle-associated membrane protein 8 ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr 4:100,250,301...100,252,756
Ensembl chr 4:100,250,301...100,252,755
JBrowse link
G Vim vimentin ISO
IEA
(MGI:MGI:3828867|PMID:19144319)
GO_REF:0000107
RGD
Ensembl
PMID:19144319 GO_REF:0000107, MGI:MGI:3828867 NCBI chr17:80,882,715...80,891,200
Ensembl chr17:80,882,666...80,891,212
JBrowse link
G Vps26b VPS26 retromer complex component B ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr 8:28,054,407...28,075,514
Ensembl chr 8:28,054,407...28,075,514
JBrowse link
G Was WASP actin nucleation promoting factor ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr  X:15,155,246...15,164,099
Ensembl chr  X:15,155,230...15,164,105
JBrowse link
G Wnt5a Wnt family member 5A IEA
ISO
GO_REF:0000107
(PMID:18174455)
Ensembl
RGD
PMID:18174455 GO_REF:0000107 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Xcl1 X-C motif chemokine ligand 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:83,199,402...83,202,845
Ensembl chr13:83,199,264...83,202,864
JBrowse link
G Zyx zyxin ISO (MGI:MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:MGI:3828867 NCBI chr 4:71,740,188...71,749,386
Ensembl chr 4:71,740,532...71,749,386
JBrowse link
interferon-gamma-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifng interferon gamma ISO (MGI:MGI:5490676|PMID:23629966)
(PMID:22504299), (PMID:23629966)
RGD PMID:22504299, PMID:23629966 MGI:MGI:5490676 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419
JBrowse link
G Irf1 interferon regulatory factor 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5317515|PMID:21909274)
Ensembl
UniProt
RGD
PMID:21909274 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5317515 NCBI chr10:39,109,530...39,116,532
Ensembl chr10:39,109,522...39,116,531
JBrowse link
G Jak2 Janus kinase 2 IDA PMID:11536325 BHF-UCL PMID:11536325 RGD:8553830 NCBI chr 1:247,398,667...247,457,521
Ensembl chr 1:247,398,598...247,458,509
JBrowse link
G Nmi N-myc (and STAT) interactor IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:37,458,891...37,480,984
Ensembl chr 3:37,458,890...37,480,984
JBrowse link
G Stat1 signal transducer and activator of transcription 1 ISO (MGI:MGI:5493216|PMID:12138178)
(PMID:21268089), (PMID:26479788)
RGD PMID:12138178, PMID:21268089, PMID:26479788 MGI:MGI:5493216 NCBI chr 9:54,287,540...54,327,958
Ensembl chr 9:54,287,541...54,484,533
JBrowse link
G Tp53 tumor protein p53 ISO (MGI:MGI:5490676|PMID:23629966) RGD PMID:23629966 MGI:MGI:5490676 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
negative regulation of interferon-gamma-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 ISO (PMID:16709924) RGD PMID:16709924 NCBI chr 1:21,525,421...21,537,872
Ensembl chr 1:21,525,421...21,537,863
JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 ISO (PMID:11679576) RGD PMID:11679576 NCBI chr10:11,059,701...11,085,186
Ensembl chr10:11,060,313...11,085,210
JBrowse link
G Otop1 otopetrin 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:5750846|PMID:24379350)
UniProt
RGD
PMID:24379350 GO_REF:0000024, MGI:MGI:5750846 NCBI chr14:77,236,278...77,263,729
Ensembl chr14:77,236,278...77,263,729
JBrowse link
G Parp14 poly (ADP-ribose) polymerase family, member 14 ISO (PMID:27796300)
(MGI:MGI:5905929|PMID:27796300)
RGD PMID:27796300 MGI:MGI:5905929 NCBI chr11:68,105,442...68,137,509
Ensembl chr11:68,105,369...68,137,535
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma ISO (PMID:21268089) RGD PMID:21268089 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 ISO
ISS
(MGI:MGI:5493216|PMID:12138178)
GO_REF:0000024
RGD
UniProt
PMID:12138178 GO_REF:0000024, MGI:MGI:5493216 NCBI chr18:63,415,298...63,489,240
Ensembl chr18:63,415,306...63,488,027
JBrowse link
positive regulation of interferon-gamma-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpx hemopexin ISO MGI:MGI:2447193 (MGI:MGI:3807609|PMID:18641331) RGD PMID:18641331 MGI:MGI:3807609 NCBI chr 1:170,423,558...170,431,066
Ensembl chr 1:170,423,483...170,431,073
JBrowse link
G Irgm immunity-related GTPase M ISO (PMID:16888103)
(MGI:MGI:3656111|PMID:16888103)
RGD PMID:16888103 MGI:MGI:3656111 NCBI chr10:34,213,885...34,221,968
Ensembl chr10:34,213,936...34,221,928
JBrowse link
G Med1 mediator complex subunit 1 ISO MGI:MGI:2176946|MGI:MGI:3511276 (MGI:MGI:3798012|PMID:18339625) RGD PMID:18339625 MGI:MGI:3798012 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Nlrc5 NLR family, CARD domain containing 5 ISO (PMID:20061403), (PMID:20639463) RGD PMID:20061403, PMID:20639463 NCBI chr19:10,904,381...11,006,202
Ensembl chr19:10,905,542...10,976,396
JBrowse link
G Parp9 poly (ADP-ribose) polymerase family, member 9 ISO
IBA
(PMID:27796300)
PMID:21873635
(MGI:MGI:5905929|PMID:27796300)
RGD PMID:27796300, PMID:21873635 MGI:MGI:5905929, RGD:13792537 NCBI chr11:67,724,071...67,758,027
Ensembl chr11:67,724,076...67,756,799
JBrowse link
G Txk TXK tyrosine kinase ISO (PMID:11859127) RGD PMID:11859127 NCBI chr14:38,029,809...38,085,822
Ensembl chr14:38,030,189...38,085,919
JBrowse link
positive regulation of response to interferon-gamma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpx hemopexin ISO MGI:MGI:2447193 (MGI:MGI:3807609|PMID:18641331) RGD PMID:18641331 MGI:MGI:3807609 NCBI chr 1:170,423,558...170,431,066
Ensembl chr 1:170,423,483...170,431,073
JBrowse link
regulation of interferon-gamma-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc37 cell division cycle 37, HSP90 cochaperone ISO
IEA
(PMID:16280321)
GO_REF:0000107
RGD
Ensembl
PMID:16280321 GO_REF:0000107 NCBI chr 8:22,160,922...22,173,797
Ensembl chr 8:22,154,067...22,173,804
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO (PMID:16280321) RGD PMID:16280321 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Socs1 suppressor of cytokine signaling 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:4,956,795...4,958,472
Ensembl chr10:4,957,326...4,958,461
JBrowse link
regulation of response to interferon-gamma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp9 poly (ADP-ribose) polymerase family, member 9 ISO (PMID:16809771) RGD PMID:16809771 NCBI chr11:67,724,071...67,758,027
Ensembl chr11:67,724,076...67,756,799
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    immune system process 2843
      immune response 1746
        innate immune response 836
          response to interferon-gamma 160
            cellular response to interferon-gamma + 129
            negative regulation of response to interferon-gamma + 6
            positive regulation of response to interferon-gamma + 6
            regulation of response to interferon-gamma + 15
Path 2
Term Annotations click to browse term
  biological_process 20028
    response to stimulus 10583
      response to biotic stimulus 1745
        response to external biotic stimulus 1712
          response to other organism 1708
            defense response to other organism 1119
              innate immune response 836
                response to interferon-gamma 160
                  cellular response to interferon-gamma + 129
                  negative regulation of response to interferon-gamma + 6
                  positive regulation of response to interferon-gamma + 6
                  regulation of response to interferon-gamma + 15
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.