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ONTOLOGY REPORT - ANNOTATIONS


Term:high-density lipoprotein particle assembly
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Accession:GO:0034380 term browser browse the term
Definition:The non-covalent aggregation and arrangement of proteins and lipids to form a high-density lipoprotein particle.
Synonyms:exact_synonym: HDL assembly


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high-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (PMID:10431236), (PMID:14754908), (PMID:17305370) BHF-UCL PMID:10431236 PMID:14754908 PMID:17305370 NCBI chrNW_004955419:21,553,863...21,681,626
Ensembl chrNW_004955419:21,553,835...21,681,619
JBrowse link
G Abca7 ATP binding cassette subfamily A member 7 ISO (PMID:14570867) Alzheimers_University_of_Toronto PMID:14570867 NCBI chrNW_004955495:6,818,002...6,838,177
Ensembl chrNW_004955495:6,815,562...6,836,772
JBrowse link
G Apoa1 apolipoprotein A1 ISO (PMID:190223) BHF-UCL PMID:190223 NCBI chrNW_004955412:18,170,331...18,172,298
Ensembl chrNW_004955412:18,170,331...18,172,298
JBrowse link
G Apoa2 apolipoprotein A2 ISO (PMID:218942) BHF-UCL PMID:218942 NCBI chrNW_004955468:12,977,956...12,979,282
Ensembl chrNW_004955468:12,977,956...12,979,753
JBrowse link
G Apoe apolipoprotein E ISO (PMID:14754908), (PMID:17305370) UniProt PMID:14754908 PMID:17305370 NCBI chrNW_004955555:1,998,170...2,002,003
Ensembl chrNW_004955555:1,999,711...2,001,888
JBrowse link
G Apom apolipoprotein M ISO (MGI:3575626|PMID:15793583) BHF-UCL PMID:15793583 MGI:3575626 NCBI chrNW_004955437:190,609...192,781
Ensembl chrNW_004955437:190,609...197,342
JBrowse link
positive regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO (MGI:5427333|PMID:22179027) UniProt PMID:22179027 MGI:5427333 NCBI chrNW_004955419:21,553,863...21,681,626
Ensembl chrNW_004955419:21,553,835...21,681,619
JBrowse link
G Nr1h2 nuclear receptor subfamily 1 group H member 2 ISO (MGI:3720271|PMID:17657314), (MGI:3794353|PMID:16825483) BHF-UCL PMID:16825483 PMID:17657314 MGI:3720271 MGI:3794353 NCBI chrNW_004955559:731,630...736,973
Ensembl chrNW_004955559:730,670...737,505
JBrowse link
regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lcat lecithin-cholesterol acyltransferase ISO (MGI:3848791|PMID:19065001) UniProt PMID:19065001 MGI:3848791 NCBI chrNW_004955484:8,772,692...8,776,122
Ensembl chrNW_004955484:8,772,692...8,776,122
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11893
    regulation of biological process 8271
      regulation of plasma lipoprotein particle levels 62
        plasma lipoprotein particle assembly 18
          high-density lipoprotein particle assembly 8
            apolipoprotein E recycling 0
            positive regulation of high-density lipoprotein particle assembly 2
            regulation of high-density lipoprotein particle assembly + 3
Path 2
Term Annotations click to browse term
  biological_process 11893
    cellular process 11099
      cellular component organization or biogenesis 4870
        cellular component organization 4790
          cellular component assembly 2192
            protein-containing complex assembly 1044
              protein-lipid complex assembly 22
                plasma lipoprotein particle assembly 18
                  high-density lipoprotein particle assembly 8
                    apolipoprotein E recycling 0
                    positive regulation of high-density lipoprotein particle assembly 2
                    regulation of high-density lipoprotein particle assembly + 3
paths to the root