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ONTOLOGY REPORT - ANNOTATIONS


Term:histone H3-K4 demethylation, trimethyl-H3-K4-specific
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Accession:GO:0034721 term browser browse the term
Definition:The modification of histone H3 by the removal of a methyl group from a trimetylated lysine at position 4 of the histone.
Synonyms:exact_synonym: H3K4 demethylation (me3)
 related_synonym: histone H3-K4 tridemethylation


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histone H3-K4 demethylation, trimethyl-H3-K4-specific term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Jarid2 jumonji and AT-rich interaction domain containing 2 JBrowse link 17 20,183,440 20,365,219 RGD:1600115
G Kdm1b lysine demethylase 1B JBrowse link 17 17,987,972 18,028,808 RGD:1600115
G Kdm5a lysine demethylase 5A JBrowse link 4 152,892,388 152,972,196 RGD:1600115
G Kdm5b lysine demethylase 5B JBrowse link 13 51,384,371 51,455,392 RGD:1600115
G Kdm5c lysine demethylase 5C JBrowse link X 22,302,664 22,349,298 RGD:1600115
G Kdm5d lysine demethylase 5D JBrowse link Y 501,058 589,267 RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19332
    metabolic process 11554
      demethylation 69
        protein demethylation 31
          histone demethylation 29
            histone lysine demethylation 28
              histone H3-K4 demethylation 9
                histone H3-K4 demethylation, trimethyl-H3-K4-specific 6
Path 2
Term Annotations click to browse term
  biological_process 19332
    metabolic process 11554
      organic substance metabolic process 10949
        organonitrogen compound metabolic process 6852
          protein metabolic process 5973
            cellular protein metabolic process 5293
              cellular protein modification process 3851
                protein dealkylation 31
                  protein demethylation 31
                    histone demethylation 29
                      histone lysine demethylation 28
                        histone H3-K4 demethylation 9
                          histone H3-K4 demethylation, trimethyl-H3-K4-specific 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.