ONTOLOGY REPORT - ANNOTATIONS


Term:axoneme assembly
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Accession:GO:0035082 term browser browse the term
Definition:The assembly and organization of an axoneme, the bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements.
Comment:Note that cilia and eukaryotic flagella are deemed to be equivalent.
Synonyms:exact_synonym: ciliary axoneme assembly;   cilium axoneme assembly;   flagellar axoneme assembly;   flagellum axoneme assembly
 related_synonym: axoneme biogenesis;   cilium axoneme biogenesis
 alt_id: GO:0035083;   GO:0035084


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axoneme assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak7 adenylate kinase 7 JBrowse link 6 129,538,648 129,606,960 RGD:1624291
G Cc2d2a coiled-coil and C2 domain containing 2A JBrowse link 14 71,895,128 71,979,452 RGD:1624291
RGD:1600115
G Ccdc40 coiled-coil domain containing 40 JBrowse link 10 108,055,270 108,393,408 RGD:1624291
RGD:1600115
G Cfap206 cilia and flagella associated protein 206 JBrowse link 5 50,148,685 50,193,580 RGD:1600115
G Cluap1 clusterin associated protein 1 JBrowse link 10 11,847,058 11,878,792 RGD:1624291
G Dcx doublecortin JBrowse link X 115,098,675 115,175,515 RGD:13792537
G Gas8 growth arrest specific 8 JBrowse link 19 56,316,367 56,335,873 RGD:1624291
RGD:1600115
G Jhy junctional cadherin complex regulator JBrowse link 8 45,084,067 45,140,570 RGD:1624291
G Lrguk leucine-rich repeats and guanylate kinase domain containing JBrowse link 4 61,419,987 61,544,748 RGD:1624291
RGD:1600115
G Lrrc46 leucine rich repeat containing 46 JBrowse link 10 84,971,674 84,983,867 RGD:13792537
G Ofd1 OFD1, centriole and centriolar satellite protein JBrowse link X 29,562,165 29,602,934 RGD:1624291
G Rp1 RP1, axonemal microtubule associated JBrowse link 5 15,005,028 15,060,508 RGD:1624291
RGD:13792537
G Rp1l1 RP1 like 1 JBrowse link 15 47,344,380 47,384,461 RGD:13792537
G Rsph1 radial spoke head component 1 JBrowse link 20 9,998,698 10,020,719 RGD:1624291
RGD:1600115
G Rsph4a radial spoke head component 4A JBrowse link 20 32,450,701 32,467,362 RGD:1624291
G Rsph9 radial spoke head 9 homolog JBrowse link 9 17,224,589 17,245,093 RGD:1624291
RGD:13792537
G Spag16 sperm associated antigen 16 JBrowse link 9 77,027,626 77,833,476 RGD:1624291
G Ttc26 tetratricopeptide repeat domain 26 JBrowse link 4 66,090,178 66,147,998 RGD:1600115
RGD:1624291
G Ttll1 tubulin tyrosine ligase like 1 JBrowse link 7 124,338,396 124,367,719 RGD:1624291
axonemal central apparatus assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 JBrowse link 1 165,515,718 165,530,163 RGD:1624291
RGD:13792537
G Hydin Hydin, axonemal central pair apparatus protein JBrowse link 19 41,036,507 41,379,634 RGD:1624291
RGD:1600115
G Spag17 sperm associated antigen 17 JBrowse link 2 202,159,659 202,452,361 RGD:1624291
RGD:13792537
axonemal dynein complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc103 coiled-coil domain containing 103 JBrowse link 10 90,984,213 90,987,829 RGD:1624291
G Ccdc39 coiled-coil domain containing 39 JBrowse link 2 120,278,605 120,367,829 RGD:1624291
RGD:1600115
G Ccdc40 coiled-coil domain containing 40 JBrowse link 10 108,055,270 108,393,408 RGD:1624291
G Ccdc65 coiled-coil domain containing 65 JBrowse link 7 140,383,395 140,397,186 RGD:13792537
G Dnaaf1 dynein, axonemal, assembly factor 1 JBrowse link 19 52,217,427 52,245,930 RGD:1624291
G Dnaaf2 dynein, axonemal, assembly factor 2 JBrowse link 6 91,481,439 91,490,189 RGD:1624291
RGD:13792537
RGD:1600115
G Dnaaf3 dynein, axonemal, assembly factor 3 JBrowse link 1 72,874,131 72,882,867 RGD:1624291
RGD:1600115
G Drc1 dynein regulatory complex subunit 1 JBrowse link 6 27,425,237 27,460,038 RGD:1624291
RGD:13792537
RGD:1600115
G Pih1d3 PIH1 domain containing 3 JBrowse link X 111,389,557 111,439,399 RGD:1624291
RGD:1600115
G Spag1 sperm associated antigen 1 JBrowse link 7 74,994,379 75,054,294 RGD:1600115
inner dynein arm assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc103 coiled-coil domain containing 103 JBrowse link 10 90,984,213 90,987,829 RGD:1624291
RGD:13792537
G Ccdc39 coiled-coil domain containing 39 JBrowse link 2 120,278,605 120,367,829 RGD:1624291
RGD:13792537
RGD:1600115
G Ccdc40 coiled-coil domain containing 40 JBrowse link 10 108,055,270 108,393,408 RGD:1624291
G Dnaaf1 dynein, axonemal, assembly factor 1 JBrowse link 19 52,217,427 52,245,930 RGD:1624291
RGD:1600115
G Dnaaf4 dynein axonemal assembly factor 4 JBrowse link 8 79,637,678 79,651,892 RGD:1624291
RGD:13792537
RGD:1600115
G Dnaaf5 dynein, axonemal, assembly factor 5 JBrowse link 12 17,545,468 17,584,466 RGD:1624291
RGD:13792537
G Dnah1 dynein, axonemal, heavy chain 1 JBrowse link 16 7,345,131 7,407,009 RGD:1624291
RGD:1600115
G Dnah7 dynein, axonemal, heavy chain 7 JBrowse link 9
9
60,070,087
59,564,253
60,330,121
59,595,347
RGD:1624291
RGD:13792537
RGD:1600115
G Dnali1 dynein, axonemal, light intermediate chain 1 JBrowse link 5 143,053,365 143,062,203 RGD:13792537
G Lrrc6 leucine rich repeat containing 6 JBrowse link 7 107,130,402 107,231,507 RGD:1624291
G Tekt2 tektin 2 JBrowse link 5 144,341,955 144,345,500 RGD:1624291
RGD:1600115
G Wdr63 WD repeat domain 63 JBrowse link 2 251,912,432 251,970,699 RGD:13792537
G Zmynd10 zinc finger, MYND-type containing 10 JBrowse link 8 116,302,513 116,306,871 RGD:1600115
RGD:13792537
RGD:1624291
outer dynein arm assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Armc4 armadillo repeat containing 4 JBrowse link 17 60,283,926 60,474,289 RGD:1624291
RGD:1600115
G Ccdc103 coiled-coil domain containing 103 JBrowse link 10 90,984,213 90,987,829 RGD:1624291
RGD:1600115
G Ccdc114 coiled-coil domain containing 114 JBrowse link 1 101,904,042 101,932,999 RGD:1600115
RGD:13792537
RGD:1624291
G Ccdc151 coiled-coil domain containing 151 JBrowse link 8 23,000,912 23,014,707 RGD:1624291
RGD:1600115
G Ccdc63 coiled-coil domain containing 63 JBrowse link 12 39,905,120 39,950,719 RGD:13792537
G Daw1 dynein assembly factor with WD repeats 1 JBrowse link 9 88,964,530 89,001,568 RGD:1624291
G Dnaaf1 dynein, axonemal, assembly factor 1 JBrowse link 19 52,217,427 52,245,930 RGD:1624291
RGD:1600115
G Dnaaf4 dynein axonemal assembly factor 4 JBrowse link 8 79,637,678 79,651,892 RGD:1624291
RGD:13792537
RGD:1600115
G Dnaaf5 dynein, axonemal, assembly factor 5 JBrowse link 12 17,545,468 17,584,466 RGD:1624291
RGD:13792537
G Dnah5 dynein, axonemal, heavy chain 5 JBrowse link 2
2
80,947,730
81,159,060
81,143,997
81,337,560
RGD:1624291
RGD:13792537
G Dnah8 dynein, axonemal, heavy chain 8 JBrowse link 20 9,301,317 9,560,805 RGD:13792537
G Dnai1 dynein, axonemal, intermediate chain 1 JBrowse link 5 57,947,796 58,017,985 RGD:1624291
RGD:13792537
G Dnai2 dynein, axonemal, intermediate chain 2 JBrowse link 10 103,266,343 103,301,521 RGD:1624291
RGD:13792537
G Dnal1 dynein, axonemal, light chain 1 JBrowse link 6 107,596,785 107,623,869 RGD:1624291
RGD:13792537
G Lrrc6 leucine rich repeat containing 6 JBrowse link 7 107,130,402 107,231,507 RGD:1624291
G Lrrc61 leucine rich repeat containing 61 JBrowse link 4 78,186,181 78,206,818 RGD:13792537
G Zmynd10 zinc finger, MYND-type containing 10 JBrowse link 8 116,302,513 116,306,871 RGD:1600115
RGD:13792537
RGD:1624291
sperm axoneme assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bbs2 Bardet-Biedl syndrome 2 JBrowse link 19 11,385,921 11,421,523 RGD:1624291
RGD:1600115
G Cep131 centrosomal protein 131 JBrowse link 10 109,243,240 109,267,636 RGD:1624291
G Cfap157 cilia and flagella associated protein 157 JBrowse link 3 11,813,575 11,820,549 RGD:1624291
RGD:1600115
G Cfap43 cilia and flagella associated protein 43 JBrowse link 1 267,511,359 267,598,642 RGD:1600115
RGD:1624291
G Cfap44 cilia and flagella associated protein 44 JBrowse link 11 61,160,793 61,237,056 RGD:1624291
RGD:13792537
G Dnah1 dynein, axonemal, heavy chain 1 JBrowse link 16 7,345,131 7,407,009 RGD:1624291
RGD:1600115
G Ift88 intraflagellar transport 88 JBrowse link 15 37,690,417 37,786,855 RGD:1624291
G Iqcg IQ motif containing G JBrowse link 11 70,967,228 71,007,708 RGD:1624291
RGD:13792537
RGD:1600115
G Neurl1 neuralized E3 ubiquitin protein ligase 1 JBrowse link 1 266,953,006 267,038,879 RGD:1624291
RGD:1600115
G Pla2g3 phospholipase A2, group III JBrowse link 14 83,724,828 83,730,614 RGD:1624291
RGD:1600115
G Spag16 sperm associated antigen 16 JBrowse link 9 77,027,626 77,833,476 RGD:1624291
G Spag6l sperm associated antigen 6-like JBrowse link 11 88,424,493 88,517,910 RGD:1624291
RGD:1600115
G Spef2 sperm flagellar 2 JBrowse link 2 58,901,937 59,084,194 RGD:1624291
G Tpgs1 tubulin polyglutamylase complex subunit 1 JBrowse link 7 12,912,251 12,918,173 RGD:1624291
RGD:1600115
G Ttll1 tubulin tyrosine ligase like 1 JBrowse link 7 124,338,396 124,367,719 RGD:1624291
RGD:1600115
G Ttll5 tubulin tyrosine ligase like 5 JBrowse link 6 109,693,915 109,910,479 RGD:1624291
G Ube2b ubiquitin-conjugating enzyme E2B JBrowse link 10 37,439,947 37,454,867 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17926
    cellular process 16077
      cellular component organization 6054
        cellular component assembly 2928
          axoneme assembly 65
            axonemal central apparatus assembly 3
            axonemal dynein complex assembly + 30
            sperm axoneme assembly 17
Path 2
Term Annotations click to browse term
  biological_process 17926
    cellular process 16077
      cellular component organization 6054
        organelle organization 3647
          cytoskeleton organization 1328
            microtubule cytoskeleton organization 572
              microtubule bundle formation 98
                axoneme assembly 65
                  axonemal central apparatus assembly 3
                  axonemal dynein complex assembly + 30
                  sperm axoneme assembly 17
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.