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ONTOLOGY REPORT - ANNOTATIONS


Term:appendage morphogenesis
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Accession:GO:0035107 term browser browse the term
Definition:The process in which the anatomical structures of appendages are generated and organized. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch.


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apoptotic process involved in embryonic digit morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:1197519 (MGI:3581932|PMID:15967824)
Ensembl
RGD
PMID:15967824 GO_REF:0000107, MGI:3581932 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Bcl2l11 BCL2 like 11 ISO MGI:99702 (MGI:3581932|PMID:15967824) RGD PMID:15967824 MGI:3581932 NCBI chr 3:120,726,906...120,764,192
Ensembl chr 3:120,726,906...120,764,192
JBrowse link
G Notch1 notch receptor 1 ISO MGI:1933835|MGI:2158470 (MGI:3608163|PMID:16245338) RGD PMID:16245338 MGI:3608163 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
embryonic digit morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx4 ALX homeobox 4 ISO MGI:1857484|MGI:88180 (MGI:1095762|PMID:9268572), (MGI:1095777|PMID:9272948) RGD PMID:9268572, PMID:9272948 MGI:1095762, MGI:1095777 NCBI chr 3:82,548,959...82,585,531
Ensembl chr 3:82,548,959...82,585,531
JBrowse link
G B9d1 B9 domain containing 1 ISO MGI:5301332 (MGI:5300833|PMID:22179047) RGD PMID:22179047 MGI:5300833 NCBI chr10:47,784,294...47,794,399
Ensembl chr10:47,785,033...47,792,590
Ensembl chr10:47,785,033...47,792,590
JBrowse link
G Bmp4 bone morphogenetic protein 4 IEA
ISO
GO_REF:0000107
MGI:108359|MGI:95729 (MGI:1095762|PMID:9268572)
Ensembl
RGD
PMID:9268572 GO_REF:0000107, MGI:1095762 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A ISO MGI:88276 (MGI:4430000|PMID:20043884) RGD PMID:20043884 MGI:4430000 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 ISO MGI:3806990 (MGI:3799383|PMID:18539921) RGD PMID:18539921 MGI:3799383 NCBI chr17:90,191,119...90,218,013
Ensembl chr17:90,188,043...90,218,013
Ensembl chr 5:90,188,043...90,218,013
JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator ISO (MGI:3821640|PMID:19004860) RGD PMID:19004860 MGI:3821640 NCBI chr 1:165,382,279...165,480,088
Ensembl chr 1:165,382,690...165,479,655
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 ISO MGI:3768254 (MGI:3767479|PMID:16079159) RGD PMID:16079159 MGI:3767479 NCBI chr 7:26,641,856...26,890,503
Ensembl chr 7:26,645,422...26,859,716
JBrowse link
G Cplane1 ciliogenesis and planar polarity effector 1 ISO MGI:5297398 (MGI:5648689|PMID:25877302) RGD PMID:25877302 MGI:5648689 NCBI chr 2:57,274,175...57,350,003
NCBI chr 2:57,444,373...57,472,465
Ensembl chr 2:57,276,919...57,348,481
JBrowse link
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
MGI:1338938|MGI:1858008|MGI:2148594|MGI:2158470 (MGI:2670493|PMID:12923052), (MGI:4430000|PMID:20043884)
Ensembl
RGD
PMID:12923052, PMID:20043884 GO_REF:0000107, MGI:2670493, MGI:4430000 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ece1 endothelin converting enzyme 1 ISO
IEA
(PMID:9915973)
GO_REF:0000107
RGD
Ensembl
PMID:9915973 GO_REF:0000107 NCBI chr 5:156,215,469...156,318,652
Ensembl chr 5:156,215,417...156,318,671
JBrowse link
G Fbxw4 F-box and WD repeat domain containing 4 ISO MGI:1857833|MGI:1857834 (MGI:1278141|PMID:9733575), (MGI:1344213|PMID:10471509) RGD PMID:9733575, PMID:10471509 MGI:1278141, MGI:1344213 NCBI chr 1:265,318,526...265,420,503
Ensembl chr 1:265,318,526...265,420,503
JBrowse link
G Flvcr1 FLVCR heme transporter 1 ISO MGI:3776021 (MGI:3775000|PMID:18258918) RGD PMID:18258918 MGI:3775000 NCBI chr13:109,624,167...109,629,609
Ensembl chr13:109,578,074...109,629,482
JBrowse link
G Frem2 FRAS1 related extracellular matrix 2 ISO MGI:3794302 (MGI:5646594|PMID:26234751) RGD PMID:26234751 MGI:5646594 NCBI chr 2:142,747,501...142,885,604
Ensembl chr 2:142,747,501...142,885,604
JBrowse link
G Fuz fuzzy planar cell polarity protein ISO MGI:3531090|MGI:4346364 (MGI:4367921|PMID:19877275), (MGI:5912570|PMID:27158779) RGD PMID:19877275, PMID:27158779 MGI:4367921, MGI:5912570 NCBI chr 1:100,891,832...100,896,811
Ensembl chr 1:100,891,866...100,896,807
JBrowse link
G Gas1 growth arrest-specific 1 ISO MGI:3711070|MGI:98297 (MGI:3710451|PMID:17504941), (MGI:3710452|PMID:17504940) RGD PMID:17504940, PMID:17504941 MGI:3710451, MGI:3710452 NCBI chr17:4,846,116...4,849,350
Ensembl chr17:4,846,789...4,847,940
JBrowse link
G Gja1 gap junction protein, alpha 1 ISO MGI:2445472 (MGI:3849919|PMID:19439426) RGD PMID:19439426 MGI:3849919 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Gli2 GLI family zinc finger 2 ISO MGI:3834146 (MGI:3833793|PMID:19056373) RGD PMID:19056373 MGI:3833793 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:1856276|MGI:3798847|MGI:88180|MGI:96203|MGI:96204|MGI:96205 (MGI:1095762|PMID:9268572), (MGI:3692156|PMID:16254602), (MGI:3765370|PMID:17714700), (MGI:3821634|PMID:19036983), (MGI:5439039|PMID:22841643) RGD PMID:9268572, PMID:16254602, PMID:17714700, PMID:19036983, PMID:22841643 MGI:1095762, MGI:3692156, MGI:3765370, MGI:3821634, MGI:5439039 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Gna12 G protein subunit alpha 12 ISO MGI:95776 (MGI:2182490|PMID:12077299) RGD PMID:12077299 MGI:2182490 NCBI chr12:15,890,202...15,971,212
Ensembl chr12:15,890,170...15,971,212
JBrowse link
G Gnaq G protein subunit alpha q IEA
ISO
GO_REF:0000107
MGI:95767 (MGI:2182490|PMID:12077299)
Ensembl
RGD
PMID:12077299 GO_REF:0000107, MGI:2182490 NCBI chr 1:233,382,778...233,622,584
Ensembl chr 1:233,382,708...233,622,786
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 ISO MGI:4942413 (MGI:4943100|PMID:21377456) RGD PMID:21377456 MGI:4943100 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 IEA
ISO
GO_REF:0000107
(MGI:2429440|PMID:12070084)
Ensembl
RGD
PMID:12070084 GO_REF:0000107, MGI:2429440 NCBI chr16:36,371,489...36,373,551
Ensembl chr16:36,371,489...36,373,546
JBrowse link
G Hdac1 histone deacetylase 1 ISO UniProtKB:P70288 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hdac2 histone deacetylase 2 ISO UniProtKB:O09106 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Hoxa11 homeobox A11 ISO MGI:96193|MGI:96203 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 4:82,296,888...82,301,419
Ensembl chr 4:82,298,152...82,300,503
Ensembl chr 4:82,298,152...82,300,503
JBrowse link
G Hoxc11 homeobox C11 ISO MGI:96172|MGI:96203 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 7:144,565,392...144,568,580
Ensembl chr 7:144,565,392...144,567,580
JBrowse link
G Hoxd11 homeobox D11 ISO MGI:95729|MGI:96172|MGI:96193|MGI:96204|MGI:96205 (MGI:2667742|PMID:12869760), (MGI:3765370|PMID:17714700), (MGI:83869|PMID:8900279) RGD PMID:8900279, PMID:12869760, PMID:17714700 MGI:2667742, MGI:3765370, MGI:83869 NCBI chr 3:61,604,256...61,606,874
Ensembl chr 3:61,604,672...61,606,400
JBrowse link
G Hoxd12 homeo box D12 ISO MGI:95729|MGI:96203|MGI:96205 (MGI:3765370|PMID:17714700), (MGI:83869|PMID:8900279) RGD PMID:8900279, PMID:17714700 MGI:3765370, MGI:83869 NCBI chr 3:61,597,382...61,598,503
Ensembl chr 3:61,597,382...61,598,503
JBrowse link
G Hoxd13 homeo box D13 ISO MGI:1918115|MGI:95729|MGI:96203|MGI:96204 (MGI:1097490|PMID:9342042), (MGI:3765370|PMID:17714700), (MGI:83869|PMID:8900279) RGD PMID:8900279, PMID:9342042, PMID:17714700 MGI:1097490, MGI:3765370, MGI:83869 NCBI chr 3:61,590,376...61,593,692
Ensembl chr 3:61,590,376...61,593,692
JBrowse link
G Ift122 intraflagellar transport 122 ISO MGI:3578529 (MGI:3577662|PMID:15755804) RGD PMID:15755804 MGI:3577662 NCBI chr 4:147,756,574...147,826,983
Ensembl chr 4:147,756,553...147,826,997
JBrowse link
G Ift140 intraflagellar transport 140 ISO MGI:4458412 (MGI:5505384|PMID:23469164) RGD PMID:23469164 MGI:5505384 NCBI chr10:14,373,668...14,461,509
Ensembl chr10:14,373,679...14,461,160
JBrowse link
G Ift52 intraflagellar transport 52 ISO (MGI:3579954|PMID:15930098) RGD PMID:15930098 MGI:3579954 NCBI chr 3:159,388,868...159,413,358
Ensembl chr 3:159,392,193...159,413,575
JBrowse link
G Ift88 intraflagellar transport 88 ISO MGI:2157527|MGI:3027342|MGI:3823090|MGI:98297 (MGI:2660994|PMID:12701101), (MGI:3577662|PMID:15755804), (MGI:3579954|PMID:15930098), (MGI:3692156|PMID:16254602), (MGI:3821634|PMID:19036983) RGD PMID:12701101, PMID:15755804, PMID:15930098, PMID:16254602, PMID:19036983 MGI:2660994, MGI:3577662, MGI:3579954, MGI:3692156, MGI:3821634 NCBI chr15:37,690,417...37,786,855
Ensembl chr15:37,691,345...37,784,924
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO (PMID:17889828)
MGI:1347521|MGI:3842979 (MGI:4822496|PMID:20660756)
RGD PMID:17889828, PMID:20660756 MGI:4822496 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G Intu inturned planar cell polarity protein IEA
ISO
GO_REF:0000107
(MGI:5644615|PMID:25774014)
(PMID:27158779)
Ensembl
RGD
PMID:25774014, PMID:27158779 GO_REF:0000107, MGI:5644615 NCBI chr 2:127,589,325...127,611,705
Ensembl chr 2:127,459,012...127,525,437
JBrowse link
G Lmbr1 limb development membrane protein 1 ISO MGI:3579991 (MGI:2151954|PMID:11606546) RGD PMID:11606546 MGI:2151954 NCBI chr 4:2,116,094...2,274,111
Ensembl chr 4:2,116,094...2,201,749
JBrowse link
G Lnpk lunapark, ER junction formation factor ISO MGI:96205 (MGI:1097490|PMID:9342042) RGD PMID:9342042 MGI:1097490 NCBI chr 3:61,432,128...61,494,828
Ensembl chr 3:61,433,863...61,494,778
JBrowse link
G Lrp4 LDL receptor related protein 4 ISO MGI:2661383|MGI:3580702 (MGI:3623169|PMID:16517118) RGD PMID:16517118 MGI:3623169 NCBI chr 3:80,362,643...80,416,684
Ensembl chr 3:80,362,858...80,416,679
JBrowse link
G Lrp5 LDL receptor related protein 5 ISO MGI:1298218 (MGI:3045836|PMID:15142971) RGD PMID:15142971 MGI:3045836 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO MGI:1278315|MGI:2156191 (MGI:3045836|PMID:15142971), (MGI:4413372|PMID:19795512) RGD PMID:15142971, PMID:19795512 MGI:3045836, MGI:4413372 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 ISO (PMID:26755636)
MGI:5903729 (MGI:5771618|PMID:26755636)
RGD PMID:26755636 MGI:5771618 NCBI chr 3:58,965,025...59,120,507
Ensembl chr 3:58,965,552...59,067,369
JBrowse link
G Mks1 MKS transition zone complex subunit 1 IEA
ISO
GO_REF:0000107
MGI:4410614|MGI:4433029|MGI:4887578 (MGI:4367169|PMID:19776033), (MGI:4868517|PMID:21045211), (MGI:5487695|PMID:23454480)
Ensembl
RGD
PMID:19776033, PMID:21045211, PMID:23454480 GO_REF:0000107, MGI:4367169, MGI:4868517, MGI:5487695 NCBI chr10:75,149,814...75,160,481
Ensembl chr10:75,149,814...75,160,480
JBrowse link
G Msx1 msh homeobox 1 ISO MGI:97169 (MGI:4948979|PMID:21465616) RGD PMID:21465616 MGI:4948979 NCBI chr14:77,712,262...77,716,061
Ensembl chr14:77,712,240...77,716,059
JBrowse link
G Msx2 msh homeobox 2 ISO MGI:97168 (MGI:4948979|PMID:21465616) RGD PMID:21465616 MGI:4948979 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor IEA
ISO
GO_REF:0000107
(MGI:3790402|PMID:17360777)
Ensembl
RGD
PMID:17360777 GO_REF:0000107, MGI:3790402 NCBI chr 6:38,222,554...38,228,419
Ensembl chr 6:38,222,555...38,228,379
JBrowse link
G Nog noggin ISO
IEA
(PMID:10080184)
GO_REF:0000107
RGD
Ensembl
PMID:10080184 GO_REF:0000107 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Osr1 odd-skipped related transcription factor 1 ISO UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
G Osr2 odd-skipped related transciption factor 2 ISO UniProtKB:Q9WVG7 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 7:74,047,820...74,055,096
Ensembl chr 7:74,047,814...74,055,256
JBrowse link
G Rab23 RAB23, member RAS oncogene family ISO MGI:2137533 (MGI:1267118|PMID:9636176), (MGI:3577662|PMID:15755804) RGD PMID:9636176, PMID:15755804 MGI:1267118, MGI:3577662 NCBI chr 9:38,469,784...38,496,185
Ensembl chr 9:38,470,298...38,495,176
JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 ISO MGI:2386954|MGI:3793279|MGI:96533 (MGI:4822496|PMID:20660756) RGD PMID:20660756 MGI:4822496 NCBI chr17:11,953,552...12,134,386
Ensembl chr17:11,953,552...12,134,386
JBrowse link
G Sall1 spalt-like transcription factor 1 ISO (PMID:18280297)
(MGI:4461128|PMID:18470945)
RGD PMID:18280297, PMID:18470945 MGI:4461128 NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO MGI:3810257 (MGI:3806414|PMID:18729207) RGD PMID:18729207 MGI:3806414 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
ISS
GO_REF:0000107
MGI:95655|MGI:98715 (MGI:3039193|PMID:15075292), (MGI:3579954|PMID:15930098), (MGI:3710451|PMID:17504941), (MGI:3710452|PMID:17504940), (MGI:4822496|PMID:20660756), (MGI:5559673|PMID:11044396)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:11044396, PMID:15075292, PMID:15930098, PMID:17504940, PMID:17504941, PMID:20660756 GO_REF:0000024, GO_REF:0000107, MGI:3039193, MGI:3579954, MGI:3710451, MGI:3710452, MGI:4822496, MGI:5559673 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smad4 SMAD family member 4 IEA
ISO
GO_REF:0000107
(MGI:5444318|PMID:23034633)
Ensembl
RGD
PMID:23034633 GO_REF:0000107, MGI:5444318 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
G Tbc1d32 TBC1 domain family, member 32 ISO MGI:4440463 (MGI:4439200|PMID:20159594) RGD PMID:20159594 MGI:4439200 NCBI chr20:37,463,879...37,701,268
Ensembl chr20:37,465,278...37,700,937
JBrowse link
G Tbx2 T-box transcription factor 2 ISO (MGI:3487212|PMID:15459098) RGD PMID:15459098 MGI:3487212 NCBI chr10:73,278,932...73,290,764
Ensembl chr10:73,279,119...73,289,921
JBrowse link
G Tbx3 T-box transcription factor 3 ISS
ISO
GO_REF:0000024
MGI:5538565 (MGI:5532232|PMID:23844108)
(PMID:12116211), (PMID:9207801)
UniProt
RGD
PMID:9207801, PMID:12116211, PMID:23844108 GO_REF:0000024, MGI:5532232 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
G Tmem107 transmembrane protein 107 ISO (MGI:5432629|PMID:22698544) RGD PMID:22698544 MGI:5432629 NCBI chr10:55,653,694...55,656,270
Ensembl chr10:55,653,946...55,656,270
JBrowse link
G Tmem231 transmembrane protein 231 ISO MGI:4284576 (MGI:5300833|PMID:22179047) RGD PMID:22179047 MGI:5300833 NCBI chr19:44,137,444...44,158,624
Ensembl chr19:44,137,423...44,158,624
JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 ISO MGI:4129326 (MGI:5298450|PMID:21945076) RGD PMID:21945076 MGI:5298450 NCBI chr 9:98,621,499...98,658,223
Ensembl chr 9:98,621,506...98,656,901
JBrowse link
G Ttbk2 tau tubulin kinase 2 ISO MGI:5496675 (MGI:5493390|PMID:23141541) RGD PMID:23141541 MGI:5493390 NCBI chr 3:112,677,932...112,789,615
Ensembl chr 3:112,684,152...112,789,289
JBrowse link
G Tulp3 TUB like protein 3 ISO MGI:2388066 (MGI:3841503|PMID:19286674), (MGI:3844764|PMID:19334287) RGD PMID:19286674, PMID:19334287 MGI:3841503, MGI:3844764 NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO MGI:3038818 (MGI:3042355|PMID:15030764) RGD PMID:15030764 MGI:3042355 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector IEA
ISO
GO_REF:0000107
MGI:5558098|MGI:5558100 (MGI:5544506|PMID:24302887)
(PMID:27158779)
Ensembl
RGD
PMID:24302887, PMID:27158779 GO_REF:0000107, MGI:5544506 NCBI chr14:106,393,959...106,759,511
Ensembl chr14:106,393,959...106,759,505
JBrowse link
G Wnt5a Wnt family member 5A IEA
ISO
GO_REF:0000107
MGI:1857617 (MGI:4413372|PMID:19795512)
Ensembl
RGD
PMID:19795512 GO_REF:0000107, MGI:4413372 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Wnt7a Wnt family member 7A ISO (PMID:16826533) RGD PMID:16826533 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 IMP RGD PMID:19191224 RGD:2312786 NCBI chr 8:52,980,226...53,146,765
Ensembl chr 8:52,985,313...53,146,953
JBrowse link
embryonic forelimb morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 ISO MGI:2180721 (MGI:3046038|PMID:15069081), (MGI:4422129|PMID:20034106) RGD PMID:15069081, PMID:20034106 MGI:3046038, MGI:4422129 NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
JBrowse link
G Alx3 ALX homeobox 3 ISO MGI:108359 (MGI:2151109|PMID:11641221) RGD PMID:11641221 MGI:2151109 NCBI chr 2:210,376,510...210,386,928
Ensembl chr 2:210,381,829...210,386,928
JBrowse link
G Alx4 ALX homeobox 4 ISO MGI:1277097 (MGI:2151109|PMID:11641221) RGD PMID:11641221 MGI:2151109 NCBI chr 3:82,548,959...82,585,531
Ensembl chr 3:82,548,959...82,585,531
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISO
IEA
(PMID:15454078)
GO_REF:0000107
RGD
Ensembl
PMID:15454078 GO_REF:0000107 NCBI chr 4:150,635,808...151,270,790
Ensembl chr 4:150,641,066...150,829,913
JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 ISO MGI:1857508 (MGI:71462|PMID:7720575) RGD PMID:7720575 MGI:71462 NCBI chr 2:187,322,416...187,326,794
Ensembl chr 2:184,882,969...184,883,505
JBrowse link
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
(MGI:3055626|PMID:15371327)
Ensembl
RGD
PMID:15371327 GO_REF:0000107, MGI:3055626 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G En1 engrailed homeobox 1 ISO MGI:98961 (MGI:1194987|PMID:9362463) RGD PMID:9362463 MGI:1194987 NCBI chr13:36,532,758...36,537,888
Ensembl chr13:36,532,758...36,537,093
JBrowse link
G Hoxa11 homeobox A11 ISO MGI:96203 (MGI:5462316|PMID:22916278) RGD PMID:22916278 MGI:5462316 NCBI chr 4:82,296,888...82,301,419
Ensembl chr 4:82,298,152...82,300,503
Ensembl chr 4:82,298,152...82,300,503
JBrowse link
G Hoxa13 homeo box A13 ISO MGI:2150506 (MGI:3530958|PMID:15733672) RGD PMID:15733672 MGI:3530958 Ensembl chr 4:82,228,017...82,229,397 JBrowse link
G Hoxa9 homeobox A9 ISO MGI:96210 (MGI:78984|PMID:8625797) RGD PMID:8625797 MGI:78984
G Hoxd11 homeobox D11 ISO MGI:96172 (MGI:5462316|PMID:22916278) RGD PMID:22916278 MGI:5462316 NCBI chr 3:61,604,256...61,606,874
Ensembl chr 3:61,604,672...61,606,400
JBrowse link
G Hoxd9 homeo box D9 IEA
ISO
GO_REF:0000107
MGI:2150414|MGI:96180 (MGI:78984|PMID:8625797)
Ensembl
RGD
PMID:8625797 GO_REF:0000107, MGI:78984 NCBI chr 3:61,620,192...61,622,360
Ensembl chr 3:61,620,192...61,622,359
JBrowse link
G Ift122 intraflagellar transport 122 ISO (MGI:4888042|PMID:21209331) RGD PMID:21209331 MGI:4888042 NCBI chr 4:147,756,574...147,826,983
Ensembl chr 4:147,756,553...147,826,997
JBrowse link
G Lnpk lunapark, ER junction formation factor ISO MGI:1857660 (MGI:1097490|PMID:9342042), (MGI:5462316|PMID:22916278) RGD PMID:9342042, PMID:22916278 MGI:1097490, MGI:5462316 NCBI chr 3:61,432,128...61,494,828
Ensembl chr 3:61,433,863...61,494,778
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO MGI:1922667|MGI:2156191|MGI:4415718|MGI:98961 (MGI:1891551|PMID:11029008), (MGI:3578068|PMID:15880584), (MGI:3774879|PMID:18256198), (MGI:4413396|PMID:19653321) RGD PMID:11029008, PMID:15880584, PMID:18256198, PMID:19653321 MGI:1891551, MGI:3578068, MGI:3774879, MGI:4413396 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Mecom MDS1 and EVI1 complex locus ISO MGI:2158381 (MGI:3686680|PMID:17029558) RGD PMID:17029558 MGI:3686680 NCBI chr 2:117,396,084...117,993,604
Ensembl chr 2:117,396,007...117,454,769
JBrowse link
G Msx1 msh homeobox 1 ISO MGI:97169 (MGI:4948979|PMID:21465616) RGD PMID:21465616 MGI:4948979 NCBI chr14:77,712,262...77,716,061
Ensembl chr14:77,712,240...77,716,059
JBrowse link
G Msx2 msh homeobox 2 IEA
ISO
GO_REF:0000107
MGI:97168 (MGI:4948979|PMID:21465616)
Ensembl
RGD
PMID:21465616 GO_REF:0000107, MGI:4948979 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
G Nipbl NIPBL, cohesin loading factor ISO (PMID:19242925), (PMID:8291537) RGD PMID:8291537, PMID:19242925 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
G Osr1 odd-skipped related transcription factor 1 ISO UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
G Osr2 odd-skipped related transciption factor 2 ISO UniProtKB:Q9WVG7 (MGI:4950000|PMID:21262216), (PMID:11520675) RGD PMID:11520675, PMID:21262216 MGI:4950000 NCBI chr 7:74,047,820...74,055,096
Ensembl chr 7:74,047,814...74,055,256
JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO (MGI:3709664|PMID:17473173) RGD PMID:17473173 MGI:3709664 NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs ISO MGI:4830337 (MGI:5424521|PMID:23213437) RGD PMID:23213437 MGI:5424521 NCBI chr 5:59,348,568...59,415,169
Ensembl chr 5:59,348,639...59,415,135
JBrowse link
G Rpgrip1l Rpgrip1-like ISO MGI:3716208 (MGI:3715393|PMID:17553904) RGD PMID:17553904 MGI:3715393 NCBI chr19:17,115,266...17,208,055
Ensembl chr19:17,115,412...17,208,055
JBrowse link
G Rspo2 R-spondin 2 ISO MGI:1298218|MGI:3045965 (MGI:3774879|PMID:18256198) RGD PMID:18256198 MGI:3774879 NCBI chr 7:81,919,911...82,059,659
Ensembl chr 7:81,924,050...82,059,789
JBrowse link
G Runx2 RUNX family transcription factor 2 IEA
ISO
GO_REF:0000107
MGI:2176466 (MGI:5462316|PMID:22916278)
Ensembl
RGD
PMID:22916278 GO_REF:0000107, MGI:5462316 NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
GO_REF:0000107
MGI:1857796 (MGI:1928592|PMID:11118883), (MGI:2149276|PMID:11476582)
Ensembl
RGD
PMID:11118883, PMID:11476582 GO_REF:0000107, MGI:1928592, MGI:2149276 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Shox2 short stature homeobox 2 ISO (MGI:5462316|PMID:22916278) RGD PMID:22916278 MGI:5462316 NCBI chr 2:164,118,175...164,126,783
Ensembl chr 2:164,118,191...164,126,783
JBrowse link
G Tbx3 T-box transcription factor 3 ISO
ISS
(PMID:12116211)
GO_REF:0000024
RGD
UniProt
PMID:12116211 GO_REF:0000024 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
G Tbx5 T-box transcription factor 5 IEA
ISO
IBA
ISS
GO_REF:0000107
MGI:2387851 (MGI:2150876|PMID:11572777), (MGI:2448173|PMID:12490567)
PMID:21873635
GO_REF:0000024
(PMID:16183809)
Ensembl
RGD
UniProt
PMID:11572777, PMID:12490567, PMID:16183809, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:2150876, MGI:2448173, RGD:13792537 NCBI chr12:42,059,688...42,148,226
Ensembl chr12:42,097,626...42,148,146
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISS
ISO
GO_REF:0000024
(MGI:1313057|PMID:9811866)
UniProt
RGD
PMID:9811866 GO_REF:0000024, MGI:1313057 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
G Tp63 tumor protein p63 ISO MGI:5882553|MGI:5882555 (MGI:5824492|PMID:25503409) RGD PMID:25503409 MGI:5824492 NCBI chr11:78,234,853...78,456,559
Ensembl chr11:78,234,800...78,456,501
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO MGI:1857265 (MGI:2180404|PMID:12175489) RGD PMID:12175489 MGI:2180404 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Wnt3 Wnt family member 3 ISO MGI:2450902|MGI:2450903 (MGI:2450015|PMID:12569130) RGD PMID:12569130 MGI:2450015 NCBI chr10:91,830,709...91,874,907
Ensembl chr10:91,830,654...91,874,793
JBrowse link
G Wnt7a Wnt family member 7A ISO (PMID:16826533)
MGI:1298218|MGI:1857009|MGI:95389 (MGI:1194987|PMID:9362463), (MGI:3578068|PMID:15880584)
RGD PMID:9362463, PMID:15880584, PMID:16826533 MGI:1194987, MGI:3578068, MGI:48652 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
G Wnt9a Wnt family member 9A ISO (MGI:3055626|PMID:15371327) RGD PMID:15371327 MGI:3055626 NCBI chr10:45,659,045...45,686,103
Ensembl chr10:45,659,143...45,681,393
JBrowse link
embryonic hindlimb morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aff3 AF4/FMR2 family, member 3 ISO (PMID:18616733) RGD PMID:18616733 NCBI chr 9:44,837,979...45,291,964
Ensembl chr 9:44,839,960...45,292,047
JBrowse link
G Alx3 ALX homeobox 3 ISO MGI:108359 (MGI:2151109|PMID:11641221) RGD PMID:11641221 MGI:2151109 NCBI chr 2:210,376,510...210,386,928
Ensembl chr 2:210,381,829...210,386,928
JBrowse link
G Alx4 ALX homeobox 4 ISO MGI:1277097 (MGI:2151109|PMID:11641221) RGD PMID:11641221 MGI:2151109 NCBI chr 3:82,548,959...82,585,531
Ensembl chr 3:82,548,959...82,585,531
JBrowse link
G Bmp4 bone morphogenetic protein 4 IEA
ISO
GO_REF:0000107
MGI:104903 (MGI:1889107|PMID:10964473)
Ensembl
RGD
PMID:10964473 GO_REF:0000107, MGI:1889107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 ISO MGI:3588650 (MGI:3611161|PMID:16207732) RGD PMID:16207732 MGI:3611161 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
MGI:2148567|MGI:2148594|MGI:2158470 (MGI:2670493|PMID:12923052), (MGI:3773938|PMID:18231602)
Ensembl
RGD
PMID:12923052, PMID:18231602 GO_REF:0000107, MGI:2670493, MGI:3773938 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Dicer1 dicer 1 ribonuclease III ISO MGI:2450929|MGI:3589208 (MGI:3609457|PMID:16319892) RGD PMID:16319892 MGI:3609457 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
JBrowse link
G Fgf4 fibroblast growth factor 4 ISO MGI:99604 (MGI:3608165|PMID:16245339) RGD PMID:16245339 MGI:3608165 NCBI chr 1:218,024,537...218,029,539
Ensembl chr 1:218,025,810...218,027,220
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO MGI:95518 (MGI:3608165|PMID:16245339) RGD PMID:16245339 MGI:3608165 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Gnas GNAS complex locus ISO MGI:3043361 (MGI:3619837|PMID:15797856) RGD PMID:15797856 MGI:3619837 NCBI chr 3:172,374,957...172,434,988
Ensembl chr 3:172,374,957...172,428,483
Ensembl chr 3:172,374,957...172,428,483
JBrowse link
G Gpc3 glypican 3 ISO MGI:88180 (MGI:1889107|PMID:10964473) RGD PMID:10964473 MGI:1889107 NCBI chr  X:139,579,268...139,947,093
Ensembl chr  X:139,579,268...139,916,883
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO MGI:1922667|MGI:4415718|MGI:98961 (MGI:3578068|PMID:15880584), (MGI:3774879|PMID:18256198), (MGI:4413396|PMID:19653321) RGD PMID:15880584, PMID:18256198, PMID:19653321 MGI:3578068, MGI:3774879, MGI:4413396 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Mecom MDS1 and EVI1 complex locus ISO MGI:2158381 (MGI:3686680|PMID:17029558) RGD PMID:17029558 MGI:3686680 NCBI chr 2:117,396,084...117,993,604
Ensembl chr 2:117,396,007...117,454,769
JBrowse link
G Med1 mediator complex subunit 1 ISO MGI:2684189 (MGI:2682174|PMID:14500757) RGD PMID:14500757 MGI:2682174 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Mmp13 matrix metallopeptidase 13 IEP RGD PMID:11850435 RGD:1582550 NCBI chr 8:5,522,739...5,533,018
Ensembl chr 8:5,522,739...5,533,018
JBrowse link
G Msx1 msh homeobox 1 ISO MGI:97169 (MGI:4948979|PMID:21465616) RGD PMID:21465616 MGI:4948979 NCBI chr14:77,712,262...77,716,061
Ensembl chr14:77,712,240...77,716,059
JBrowse link
G Msx2 msh homeobox 2 IEA
ISO
GO_REF:0000107
MGI:97168 (MGI:4948979|PMID:21465616)
Ensembl
RGD
PMID:21465616 GO_REF:0000107, MGI:4948979 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
G Notch1 notch receptor 1 ISO MGI:1933835|MGI:2158470 (MGI:3608163|PMID:16245338) RGD PMID:16245338 MGI:3608163 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Osr1 odd-skipped related transcription factor 1 ISO UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
G Osr2 odd-skipped related transciption factor 2 ISO UniProtKB:Q9WVG7 (MGI:4950000|PMID:21262216), (PMID:11520675) RGD PMID:11520675, PMID:21262216 MGI:4950000 NCBI chr 7:74,047,820...74,055,096
Ensembl chr 7:74,047,814...74,055,256
JBrowse link
G Pitx1 paired-like homeodomain 1 ISO MGI:109340 (MGI:3773938|PMID:18231602), (MGI:5299938|PMID:22071103) RGD PMID:18231602, PMID:22071103 MGI:3773938, MGI:5299938 NCBI chr17:8,873,184...8,884,428
Ensembl chr17:8,878,270...8,884,423
JBrowse link
G Pitx2 paired-like homeodomain 2 ISO MGI:107374 (MGI:3773938|PMID:18231602) RGD PMID:18231602 MGI:3773938 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
G Rarb retinoic acid receptor, beta ISO MGI:97858 (MGI:1334064|PMID:10075839) RGD PMID:10075839 MGI:1334064 NCBI chr15:9,915,223...10,262,599
Ensembl chr15:10,120,206...10,262,599
JBrowse link
G Rarg retinoic acid receptor, gamma ISO MGI:97857 (MGI:1334064|PMID:10075839) RGD PMID:10075839 MGI:1334064 NCBI chr 7:143,840,739...143,863,206
Ensembl chr 7:143,839,980...143,863,186
JBrowse link
G Rpgrip1l Rpgrip1-like ISO MGI:3716208 (MGI:3715393|PMID:17553904) RGD PMID:17553904 MGI:3715393 NCBI chr19:17,115,266...17,208,055
Ensembl chr19:17,115,412...17,208,055
JBrowse link
G Rspo2 R-spondin 2 ISO MGI:1298218|MGI:3045965 (MGI:3774879|PMID:18256198) RGD PMID:18256198 MGI:3774879 NCBI chr 7:81,919,911...82,059,659
Ensembl chr 7:81,924,050...82,059,789
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
GO_REF:0000107
MGI:1857796 (MGI:1928592|PMID:11118883)
Ensembl
RGD
PMID:11118883 GO_REF:0000107, MGI:1928592 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO MGI:2177413|MGI:3605892 (MGI:3604915|PMID:16192310) RGD PMID:16192310 MGI:3604915 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468
JBrowse link
G Tbx3 T-box transcription factor 3 ISO MGI:5538565 (MGI:5532232|PMID:23844108) RGD PMID:23844108 MGI:5532232 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
G Tbx4 T-box transcription factor 4 ISO (PMID:31761294) RGD PMID:31761294 NCBI chr10:73,331,864...73,362,784
Ensembl chr10:73,333,119...73,362,783
JBrowse link
G Tp63 tumor protein p63 ISO MGI:5882553|MGI:5882555 (MGI:5824492|PMID:25503409) RGD PMID:25503409 MGI:5824492 NCBI chr11:78,234,853...78,456,559
Ensembl chr11:78,234,800...78,456,501
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (MGI:1100098|PMID:8988167) RGD PMID:8988167 MGI:1100098 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Wnt3 Wnt family member 3 ISO MGI:2450902|MGI:2450903 (MGI:2450015|PMID:12569130) RGD PMID:12569130 MGI:2450015 NCBI chr10:91,830,709...91,874,907
Ensembl chr10:91,830,654...91,874,793
JBrowse link
G Wnt7a Wnt family member 7A ISO (PMID:16826533)
MGI:1298218 (MGI:3578068|PMID:15880584)
RGD PMID:15880584, PMID:16826533 MGI:3578068 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 IMP
ISO
MGI:2182708 (MGI:1859075|PMID:10835630) RGD PMID:10835630, PMID:19191224 MGI:1859075, RGD:2312786 NCBI chr 8:52,980,226...53,146,765
Ensembl chr 8:52,985,313...53,146,953
JBrowse link
embryonic limb morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor ISO MGI:1856658 (MGI:3526782|PMID:15537664) RGD PMID:15537664 MGI:3526782 NCBI chr19:37,665,289...37,668,043
Ensembl chr19:37,665,296...37,667,987
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 ISO MGI:2180721 (MGI:2681052|PMID:14623241) RGD PMID:14623241 MGI:2681052 NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
JBrowse link
G Alx1 ALX homeobox 1 ISO MGI:108359 (MGI:1314705|PMID:9847249) RGD PMID:9847249 MGI:1314705 NCBI chr 7:44,751,865...44,771,458
Ensembl chr 7:44,751,873...44,771,458
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO MGI:103302|MGI:1857137 (MGI:1270933|PMID:9664686) RGD PMID:9664686 MGI:1270933 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO MGI:1934010|MGI:88180 (MGI:1270933|PMID:9664686) RGD PMID:9664686 MGI:1270933 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator ISO (MGI:3821640|PMID:19004860) RGD PMID:19004860 MGI:3821640 NCBI chr 1:165,382,279...165,480,088
Ensembl chr 1:165,382,690...165,479,655
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 ISO MGI:3768254 (MGI:3767479|PMID:16079159) RGD PMID:16079159 MGI:3767479 NCBI chr 7:26,641,856...26,890,503
Ensembl chr 7:26,645,422...26,859,716
JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 ISO MGI:3039046 (MGI:3037623|PMID:15030763) RGD PMID:15030763 MGI:3037623 NCBI chr 4:116,261,796...116,278,615
Ensembl chr 4:116,261,796...116,278,615
JBrowse link
G Dicer1 dicer 1 ribonuclease III ISO MGI:2450929|MGI:3589208 (MGI:3588609|PMID:16040801) RGD PMID:16040801 MGI:3588609 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 ISO MGI:1857163|MGI:1857704 (MGI:3052394|PMID:15242796) RGD PMID:15242796 MGI:3052394 NCBI chr 1:248,952,896...248,956,579
Ensembl chr 1:248,895,738...248,898,607
JBrowse link
G Dlx5 distal-less homeobox 5 IEA
ISO
GO_REF:0000107
MGI:101927|MGI:1330810 (MGI:2181241|PMID:12112878), (MGI:3794467|PMID:18326838)
Ensembl
RGD
PMID:12112878, PMID:18326838 GO_REF:0000107, MGI:2181241, MGI:3794467 NCBI chr 4:32,387,741...32,392,085
Ensembl chr 4:32,387,741...32,392,007
JBrowse link
G Dlx6 distal-less homeobox 6 ISO MGI:101926|MGI:1330810 (MGI:2181241|PMID:12112878), (MGI:3794467|PMID:18326838) RGD PMID:12112878, PMID:18326838 MGI:2181241, MGI:3794467 NCBI chr 4:32,373,096...32,377,388
Ensembl chr 4:32,373,641...32,377,253
JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 IEA
ISO
GO_REF:0000107
(MGI:3610248|PMID:16229832)
Ensembl
RGD
PMID:16229832 GO_REF:0000107, MGI:3610248 NCBI chr 8:5,217,054...5,436,969
Ensembl chr 8:5,217,217...5,429,581
JBrowse link
G En1 engrailed homeobox 1 ISO MGI:1857163|MGI:1857704|MGI:2384508 (MGI:3052394|PMID:15242796), (MGI:75252|PMID:7624797), (MGI:81767|PMID:8684466) RGD PMID:7624797, PMID:8684466, PMID:15242796 MGI:3052394, MGI:75252, MGI:81767 NCBI chr13:36,532,758...36,537,888
Ensembl chr13:36,532,758...36,537,093
JBrowse link
G Fbn2 fibrillin 2 ISO MGI:1935122|MGI:1935123|MGI:2157491 (MGI:1933664|PMID:11285249), (MGI:1934650|PMID:11350121) RGD PMID:11285249, PMID:11350121 MGI:1933664, MGI:1934650 NCBI chr18:53,068,495...53,272,254
Ensembl chr18:53,068,495...53,181,503
JBrowse link
G Fgf4 fibroblast growth factor 4 ISO MGI:99604 (MGI:3056042|PMID:15328019) RGD PMID:15328019 MGI:3056042 NCBI chr 1:218,024,537...218,029,539
Ensembl chr 1:218,025,810...218,027,220
JBrowse link
G Fgf9 fibroblast growth factor 9 ISO MGI:2135961 (MGI:3714711|PMID:17576930) RGD PMID:17576930 MGI:3714711 NCBI chr15:38,341,657...38,386,945
Ensembl chr15:38,341,089...38,387,316
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 IEA
ISO
GO_REF:0000107
MGI:2176216|MGI:2181474 (MGI:3608262|PMID:16207751)
Ensembl
RGD
PMID:16207751 GO_REF:0000107, MGI:3608262 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 ISO MGI:5463442 (MGI:5505384|PMID:23469164) RGD PMID:23469164 MGI:5505384 NCBI chr14:14,438,392...14,853,016
Ensembl chr14:14,439,082...14,689,554
JBrowse link
G Gdf5 growth differentiation factor 5 ISO MGI:1855974 (MGI:3513212|PMID:15542031) RGD PMID:15542031 MGI:3513212 NCBI chr 3:151,482,672...151,487,129
Ensembl chr 3:151,483,249...151,486,693
JBrowse link
G Gja5 gap junction protein, alpha 5 ISO MGI:2445466 (MGI:3581374|PMID:15923624) RGD PMID:15923624 MGI:3581374 NCBI chr 2:199,162,745...199,184,942
Ensembl chr 2:199,162,745...199,184,939
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:1856276|MGI:96533|MGI:98297 (MGI:2384366|PMID:12142027), (MGI:2445242|PMID:12435361), (MGI:2445270|PMID:12435627), (MGI:3608261|PMID:16284117), (MGI:3851667|PMID:19422820), (MGI:4367286|PMID:19809516), (MGI:52587|PMID:8387379) RGD PMID:8387379, PMID:12142027, PMID:12435361, PMID:12435627, PMID:16284117, PMID:19422820, PMID:19809516 MGI:2384366, MGI:2445242, MGI:2445270, MGI:3608261, MGI:3851667, MGI:4367286, MGI:52587 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO MGI:3054923 (MGI:2665160|PMID:12808456) RGD PMID:12808456 MGI:2665160 NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
JBrowse link
G Hnf1a HNF1 homeobox A ISO MGI:96770 (MGI:1334099|PMID:10090727) RGD PMID:10090727 MGI:1334099 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Hoxa10 homeobox A10 ISO MGI:96192|MGI:96202 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 4:82,285,940...82,295,892
Ensembl chr 4:82,285,528...82,295,470
JBrowse link
G Hoxa11 homeobox A11 ISO MGI:96203 (MGI:3043491|PMID:14668414) RGD PMID:14668414 MGI:3043491 NCBI chr 4:82,296,888...82,301,419
Ensembl chr 4:82,298,152...82,300,503
Ensembl chr 4:82,298,152...82,300,503
JBrowse link
G Hoxc10 homeo box C10 ISO MGI:96171|MGI:96202 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 7:144,577,578...144,582,802
Ensembl chr 7:144,577,465...144,582,622
JBrowse link
G Hoxd10 homeo box D10 ISO MGI:96171|MGI:96192 (MGI:2667742|PMID:12869760) RGD PMID:12869760 MGI:2667742 NCBI chr 3:61,614,133...61,617,342
Ensembl chr 3:61,613,774...61,617,367
JBrowse link
G Hoxd11 homeobox D11 ISO MGI:96172 (MGI:3043491|PMID:14668414) RGD PMID:14668414 MGI:3043491 NCBI chr 3:61,604,256...61,606,874
Ensembl chr 3:61,604,672...61,606,400
JBrowse link
G Hoxd13 homeo box D13 ISO MGI:1857397 (MGI:2177382|PMID:11850178) RGD PMID:11850178 MGI:2177382 NCBI chr 3:61,590,376...61,593,692
Ensembl chr 3:61,590,376...61,593,692
JBrowse link
G Jag2 jagged canonical Notch ligand 2 NAS PMID:8948600 UniProt PMID:8948600 RGD:69864 NCBI chr 6:137,711,144...137,733,331
Ensembl chr 6:137,711,155...137,733,026
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 IEA
ISO
GO_REF:0000107
MGI:98504 (MGI:1334099|PMID:10090727)
Ensembl
RGD
PMID:10090727 GO_REF:0000107, MGI:1334099 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Lrp4 LDL receptor related protein 4 ISO MGI:3621893|MGI:3707726|MGI:3707955 (MGI:3619629|PMID:16207730), (MGI:3703100|PMID:17119023) RGD PMID:16207730, PMID:17119023 MGI:3619629, MGI:3703100 NCBI chr 3:80,362,643...80,416,684
Ensembl chr 3:80,362,858...80,416,679
JBrowse link
G Lrp6 LDL receptor related protein 6 IBA
ISO
PMID:21873635
MGI:1921749 (MGI:4458999|PMID:20359476)
RGD PMID:20359476, PMID:21873635 MGI:4458999, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 ISO (PMID:12915312) RGD PMID:12915312 NCBI chr 2:150,698,248...150,867,791
Ensembl chr 2:150,756,185...150,869,690
JBrowse link
G Megf8 multiple EGF-like-domains 8 IEA
ISO
ISS
GO_REF:0000107
(MGI:5551355|PMID:24052814)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24052814 GO_REF:0000024, GO_REF:0000107, MGI:5551355 NCBI chr 1:82,184,671...82,234,045
Ensembl chr 1:82,185,034...82,234,045
JBrowse link
G Msx1 msh homeobox 1 ISO MGI:97169|MGI:98297 (MGI:3580732|PMID:15930102), (MGI:3851667|PMID:19422820) RGD PMID:15930102, PMID:19422820 MGI:3580732, MGI:3851667 NCBI chr14:77,712,262...77,716,061
Ensembl chr14:77,712,240...77,716,059
JBrowse link
G Msx2 msh homeobox 2 ISO MGI:97168|MGI:98297 (MGI:3580732|PMID:15930102), (MGI:3851667|PMID:19422820) RGD PMID:15930102, PMID:19422820 MGI:3580732, MGI:3851667 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
G Mustn1 musculoskeletal, embryonic nuclear protein 1 IEP RGD PMID:14718386 RGD:1302424 NCBI chr16:6,962,737...6,964,987
Ensembl chr16:6,962,722...6,964,989
JBrowse link
G Notch1 notch receptor 1 ISO MGI:97364 (MGI:3610505|PMID:16169548) RGD PMID:16169548 MGI:3610505 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Notch2 notch receptor 2 IEA
ISO
GO_REF:0000107
MGI:97363 (MGI:3610505|PMID:16169548)
Ensembl
RGD
PMID:16169548 GO_REF:0000107, MGI:3610505 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215
JBrowse link
G Pbx1 PBX homeobox 1 ISO MGI:1341793 (MGI:3629247|PMID:16672333) RGD PMID:16672333 MGI:3629247 NCBI chr13:86,390,741...86,671,460
Ensembl chr13:86,390,741...86,451,002
JBrowse link
G Pbx2 PBX homeobox 2 ISO MGI:97495 (MGI:3629247|PMID:16672333) RGD PMID:16672333 MGI:3629247 NCBI chr20:4,357,805...4,362,730
Ensembl chr20:4,357,733...4,362,682
JBrowse link
G Prrx1 paired related homeobox 1 ISO MGI:98218 (MGI:1306737|PMID:9729491), (MGI:1328643|PMID:9882503) RGD PMID:9729491, PMID:9882503 MGI:1306737, MGI:1328643 NCBI chr13:81,147,038...81,215,559
Ensembl chr13:81,147,348...81,214,546
JBrowse link
G Prrx2 paired related homeobox 2 ISO MGI:97712 (MGI:1306737|PMID:9729491), (MGI:1328643|PMID:9882503) RGD PMID:9729491, PMID:9882503 MGI:1306737, MGI:1328643 NCBI chr 3:9,681,871...9,718,051
Ensembl chr 3:9,681,871...9,718,051
JBrowse link
G Psen1 presenilin 1 ISO MGI:109284 (MGI:3610505|PMID:16169548) RGD PMID:16169548 MGI:3610505 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Psen2 presenilin 2 ISO MGI:1202717 (MGI:3610505|PMID:16169548) RGD PMID:16169548 MGI:3610505 NCBI chr13:98,513,600...98,539,347
Ensembl chr13:98,513,570...98,530,724
JBrowse link
G Ptch1 patched 1 ISS
ISO
GO_REF:0000024
MGI:1856954|MGI:98297 (MGI:2135419|PMID:11389830), (MGI:2152606|PMID:11784021)
UniProt
RGD
PMID:11389830, PMID:11784021 GO_REF:0000024, MGI:2135419, MGI:2152606 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
G Sall4 spalt-like transcription factor 4 ISO MGI:102541|MGI:3587949 (MGI:3614736|PMID:16380715) RGD PMID:16380715 MGI:3614736 NCBI chr 3:165,520,155...165,538,176
Ensembl chr 3:165,520,392...165,537,940
JBrowse link
G Shh sonic hedgehog signaling molecule ISS
ISO
GO_REF:0000024
MGI:105373|MGI:1934261|MGI:2387802|MGI:3053959|MGI:3053960|MGI:95729|MGI:97168|MGI:97169 (MGI:2135419|PMID:11389830), (MGI:3053241|PMID:15315763), (MGI:3851667|PMID:19422820)
UniProt
RGD
PMID:11389830, PMID:15315763, PMID:19422820 GO_REF:0000024, MGI:2135419, MGI:3053241, MGI:3851667 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Shox2 short stature homeobox 2 ISO MGI:3605739|MGI:3628798 (MGI:3621617|PMID:16537395), (MGI:3714677|PMID:17481601) RGD PMID:16537395, PMID:17481601 MGI:3621617, MGI:3714677 NCBI chr 2:164,118,175...164,126,783
Ensembl chr 2:164,118,191...164,126,783
JBrowse link
G Ski SKI proto-oncogene ISO MGI:2177555 (MGI:2445270|PMID:12435627) RGD PMID:12435627 MGI:2445270 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899
JBrowse link
G Sp8 Sp8 transcription factor ISO MGI:2684137 (MGI:2679409|PMID:14597661), (MGI:3526745|PMID:15358670) RGD PMID:14597661, PMID:15358670 MGI:2679409, MGI:3526745 NCBI chr 6:146,784,915...146,789,439
Ensembl chr 6:146,784,915...146,787,518
JBrowse link
G Sp9 Sp9 transcription factor ISO (MGI:3526745|PMID:15358670) RGD PMID:15358670 MGI:3526745 NCBI chr 3:59,981,959...59,984,489
Ensembl chr 3:59,981,959...59,984,489
JBrowse link
G Tbx4 T-box transcription factor 4 IBA
ISO
PMID:21873635
MGI:2663716 (MGI:2660720|PMID:12736212)
RGD PMID:12736212, PMID:21873635 MGI:2660720, RGD:13792537 NCBI chr10:73,331,864...73,362,784
Ensembl chr10:73,333,119...73,362,783
JBrowse link
G Tbx5 T-box transcription factor 5 ISO
ISS
(PMID:8988164)
MGI:2139360 (MGI:2660722|PMID:12736217), (MGI:3614736|PMID:16380715)
GO_REF:0000024
RGD
UniProt
PMID:8988164, PMID:12736217, PMID:16380715 GO_REF:0000024, MGI:2660722, MGI:3614736 NCBI chr12:42,059,688...42,148,226
Ensembl chr12:42,097,626...42,148,146
JBrowse link
G Tgfb2 transforming growth factor, beta 2 ISO (MGI:894212|PMID:9217007) RGD PMID:9217007 MGI:894212 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Tp63 tumor protein p63 ISO MGI:101926|MGI:101927|MGI:1934580 (MGI:1335634|PMID:10227293), (MGI:3794467|PMID:18326838) RGD PMID:10227293, PMID:18326838 MGI:1335634, MGI:3794467 NCBI chr11:78,234,853...78,456,559
Ensembl chr11:78,234,800...78,456,501
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO MGI:1857265|MGI:2157489|MGI:3038818 (MGI:1934650|PMID:11350121), (MGI:2384366|PMID:12142027), (MGI:3042355|PMID:15030764) RGD PMID:11350121, PMID:12142027, PMID:15030764 MGI:1934650, MGI:2384366, MGI:3042355 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Wdr19 WD repeat domain 19 ISO MGI:5315747|MGI:5315748 (MGI:5314316|PMID:22228095) RGD PMID:22228095 MGI:5314316 NCBI chr14:44,705,012...44,767,120
Ensembl chr14:44,705,012...44,767,120
JBrowse link
G Wnt5a Wnt family member 5A ISO MGI:1857617 (MGI:1329804|PMID:10021340) RGD PMID:10021340 MGI:1329804 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Wnt7a Wnt family member 7A ISO MGI:1857163|MGI:2384508 (MGI:3052394|PMID:15242796) RGD PMID:15242796 MGI:3052394 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 ISO MGI:1856943 RGD MGI:61278 NCBI chr 8:52,980,226...53,146,765
Ensembl chr 8:52,985,313...53,146,953
JBrowse link
embryonic nail plate morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd6 frizzled class receptor 6 ISO MGI:3050103 (MGI:5499279|PMID:23439395) RGD PMID:23439395 MGI:5499279 NCBI chr 7:77,898,329...77,931,034
Ensembl chr 7:77,899,322...77,931,029
JBrowse link
G Msx1 msh homeobox 1 ISO (PMID:11369996)
MGI:97169 (MGI:3688967|PMID:11369996), (MGI:4948979|PMID:21465616)
RGD PMID:11369996, PMID:21465616 MGI:3688967, MGI:4948979 NCBI chr14:77,712,262...77,716,061
Ensembl chr14:77,712,240...77,716,059
JBrowse link
G Msx2 msh homeobox 2 IEA
ISO
GO_REF:0000107
MGI:97168 (MGI:4948979|PMID:21465616)
Ensembl
RGD
PMID:21465616 GO_REF:0000107, MGI:4948979 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
embryonic skeletal limb joint morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216)
Ensembl
RGD
PMID:21262216 GO_REF:0000107, MGI:4950000 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Osr1 odd-skipped related transcription factor 1 ISO UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
G Osr2 odd-skipped related transciption factor 2 ISO UniProtKB:Q9WVG7 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 7:74,047,820...74,055,096
Ensembl chr 7:74,047,814...74,055,256
JBrowse link
forelimb morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmn1 formin 1 ISO MGI:3718051 (MGI:3717025|PMID:17554679) RGD PMID:17554679 MGI:3717025 NCBI chr 3:104,783,093...105,170,761
Ensembl chr 3:104,816,987...105,086,436
JBrowse link
G Gdf5 growth differentiation factor 5 ISO MGI:1855974 (MGI:65616|PMID:8145850) RGD PMID:8145850 MGI:65616 NCBI chr 3:151,482,672...151,487,129
Ensembl chr 3:151,483,249...151,486,693
JBrowse link
G Hoxd10 homeo box D10 ISO MGI:96210 (MGI:1350864|PMID:10642795) RGD PMID:10642795 MGI:1350864 NCBI chr 3:61,614,133...61,617,342
Ensembl chr 3:61,613,774...61,617,367
JBrowse link
G Hoxd9 homeo box D9 ISO MGI:96202 (MGI:1350864|PMID:10642795) RGD PMID:10642795 MGI:1350864 NCBI chr 3:61,620,192...61,622,360
Ensembl chr 3:61,620,192...61,622,359
JBrowse link
G Nipbl NIPBL, cohesin loading factor ISO (PMID:15146186) RGD PMID:15146186 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
G Rnf165 ring finger protein 165 ISO MGI:5516581 (MGI:5499270|PMID:23610558) RGD PMID:23610558 MGI:5499270 NCBI chr18:73,831,289...73,873,246
Ensembl chr18:73,831,326...73,873,280
JBrowse link
G Sall1 spalt-like transcription factor 1 ISO MGI:109295 (MGI:3829797|PMID:19168674) RGD PMID:19168674 MGI:3829797 NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
JBrowse link
G Sall3 spalt-like transcription factor 3 ISO MGI:1889585 (MGI:3829797|PMID:19168674) RGD PMID:19168674 MGI:3829797 NCBI chr18:77,572,200...77,591,710
Ensembl chr18:77,573,702...77,579,969
JBrowse link
G Tbx3 T-box transcription factor 3 ISO (PMID:9207801) RGD PMID:9207801 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
G Tbx5 T-box transcription factor 5 ISO (PMID:8988164), (PMID:8988165)
MGI:2387850 (MGI:3527352|PMID:15621531)
RGD PMID:8988164, PMID:8988165, PMID:15621531 MGI:3527352 NCBI chr12:42,059,688...42,148,226
Ensembl chr12:42,097,626...42,148,146
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO MGI:2176682 (MGI:1313057|PMID:9811866) RGD PMID:9811866 MGI:1313057 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
G Tfap2b transcription factor AP-2 beta ISS
ISO
GO_REF:0000024
(MGI:5287515|PMID:21829553)
UniProt
RGD
PMID:21829553 GO_REF:0000024, MGI:5287515 NCBI chr 9:25,410,669...25,440,568
Ensembl chr 9:25,410,669...25,440,411
JBrowse link
G Wnt7a Wnt family member 7A ISO MGI:1857009 RGD MGI:48652 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 ISO MGI:2182708 (MGI:1859075|PMID:10835630) RGD PMID:10835630 MGI:1859075 NCBI chr 8:52,980,226...53,146,765
Ensembl chr 8:52,985,313...53,146,953
JBrowse link
hindlimb morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO MGI:1856099 RGD MGI:61157 NCBI chr  X:77,076,085...77,193,644
Ensembl chr  X:77,076,106...77,193,644
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A ISO MGI:2158390|MGI:2176182 (MGI:3621084|PMID:16556916) RGD PMID:16556916 MGI:3621084 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
JBrowse link
G Fmn1 formin 1 ISO MGI:3718051 (MGI:3717025|PMID:17554679) RGD PMID:17554679 MGI:3717025 NCBI chr 3:104,783,093...105,170,761
Ensembl chr 3:104,816,987...105,086,436
JBrowse link
G Gdf5 growth differentiation factor 5 ISO MGI:1855974|MGI:1856810 (MGI:3722565|PMID:17085896), (MGI:65616|PMID:8145850) RGD PMID:8145850, PMID:17085896 MGI:3722565, MGI:65616 NCBI chr 3:151,482,672...151,487,129
Ensembl chr 3:151,483,249...151,486,693
JBrowse link
G Hoxd10 homeo box D10 ISO MGI:96210 (MGI:1350864|PMID:10642795) RGD PMID:10642795 MGI:1350864 NCBI chr 3:61,614,133...61,617,342
Ensembl chr 3:61,613,774...61,617,367
JBrowse link
G Hoxd9 homeo box D9 IEA
ISO
GO_REF:0000107
MGI:96202 (MGI:1350864|PMID:10642795)
Ensembl
RGD
PMID:10642795 GO_REF:0000107, MGI:1350864 NCBI chr 3:61,620,192...61,622,360
Ensembl chr 3:61,620,192...61,622,359
JBrowse link
G Pitx1 paired-like homeodomain 1 ISO MGI:1857659|MGI:1934200 (MGI:1332284|PMID:10049363), (MGI:1333095|PMID:10101115), (MGI:3527352|PMID:15621531), (MGI:3689784|PMID:16989801) RGD PMID:10049363, PMID:10101115, PMID:15621531, PMID:16989801 MGI:1332284, MGI:1333095, MGI:3527352, MGI:3689784 NCBI chr17:8,873,184...8,884,428
Ensembl chr17:8,878,270...8,884,423
JBrowse link
G Ptch1 patched 1 ISO MGI:1857447 (MGI:1095757|PMID:9262482) RGD PMID:9262482 MGI:1095757 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
G Sall1 spalt-like transcription factor 1 ISO MGI:109295 (MGI:3829797|PMID:19168674) RGD PMID:19168674 MGI:3829797 NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
JBrowse link
G Sall3 spalt-like transcription factor 3 ISO MGI:1889585 (MGI:3829797|PMID:19168674) RGD PMID:19168674 MGI:3829797 NCBI chr18:77,572,200...77,591,710
Ensembl chr18:77,573,702...77,579,969
JBrowse link
G Tfap2b transcription factor AP-2 beta ISS
ISO
GO_REF:0000024
(MGI:5287515|PMID:21829553)
UniProt
RGD
PMID:21829553 GO_REF:0000024, MGI:5287515 NCBI chr 9:25,410,669...25,440,568
Ensembl chr 9:25,410,669...25,440,411
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO MGI:2157489 (MGI:1353858|PMID:10700192) RGD PMID:10700192 MGI:1353858 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Wnt7a Wnt family member 7A ISO MGI:1857009 RGD MGI:48652 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 ISO MGI:2182708 (MGI:1859075|PMID:10835630) RGD PMID:10835630 MGI:1859075 NCBI chr 8:52,980,226...53,146,765
Ensembl chr 8:52,985,313...53,146,953
JBrowse link
limb bud formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col2a1 collagen type II alpha 1 chain IEA
ISO
GO_REF:0000107
(PMID:20940257)
Ensembl
RGD
PMID:20940257 GO_REF:0000107 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO MGI:1927833 (MGI:1309706|PMID:9784490) RGD PMID:9784490 MGI:1309706 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:2153790|MGI:2153799 (MGI:1197797|PMID:9435295), (MGI:1346744|PMID:10518547) RGD PMID:9435295, PMID:10518547 MGI:1197797, MGI:1346744 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Plxna2 plexin A2 ISO (PMID:19666519) RGD PMID:19666519 NCBI chr13:113,373,569...113,570,774
Ensembl chr13:113,373,578...113,571,648
JBrowse link
G Sema3c semaphorin 3C ISO (PMID:19666519) RGD PMID:19666519 NCBI chr 4:14,318,276...14,490,438
Ensembl chr 4:14,318,274...14,490,446
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
GO_REF:0000107
MGI:1857796 (MGI:1928592|PMID:11118883)
Ensembl
RGD
PMID:11118883 GO_REF:0000107, MGI:1928592 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Sox11 SRY-box transcription factor 11 ISS
ISO
GO_REF:0000024
(MGI:5285157|PMID:20596238)
UniProt
RGD
PMID:20596238 GO_REF:0000024, MGI:5285157 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
JBrowse link
G Sox4 SRY-box transcription factor 4 ISO (MGI:5285157|PMID:20596238) RGD PMID:20596238 MGI:5285157 NCBI chr17:37,615,022...37,619,728 JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (PMID:20940257) RGD PMID:20940257 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Wnt3 Wnt family member 3 ISO
IEA
(PMID:14872406)
GO_REF:0000107
RGD
Ensembl
PMID:14872406 GO_REF:0000107 NCBI chr10:91,830,709...91,874,907
Ensembl chr10:91,830,654...91,874,793
JBrowse link
G Zfp219 zinc finger protein 219 ISO (PMID:20940257) RGD PMID:20940257 NCBI chr15:28,402,412...28,417,379
Ensembl chr15:28,402,415...28,406,046
JBrowse link
limb joint morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:4834113|PMID:20404326) RGD PMID:20404326 MGI:4834113 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Sulf1 sulfatase 1 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:5,999,520...6,186,901
Ensembl chr 5:5,999,475...6,186,329
JBrowse link
limb morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alx4 ALX homeobox 4 ISO MGI:104621|MGI:1857484 (MGI:1098911|PMID:9374397), (MGI:1314705|PMID:9847249) RGD PMID:9374397, PMID:9847249 MGI:1098911, MGI:1314705 NCBI chr 3:82,548,959...82,585,531
Ensembl chr 3:82,548,959...82,585,531
JBrowse link
G Asph aspartate-beta-hydroxylase ISO MGI:2179287 (MGI:2177999|PMID:11773073) RGD PMID:11773073 MGI:2177999 NCBI chr 5:22,577,680...22,799,333
Ensembl chr 5:22,577,675...22,799,349
JBrowse link
G Bak1 BCL2-antagonist/killer 1 ISO MGI:99702 (MGI:1929371|PMID:11163212) RGD PMID:11163212 MGI:1929371 NCBI chr20:5,609,620...5,618,899
Ensembl chr20:5,609,625...5,618,260
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO MGI:1097161 (MGI:1929371|PMID:11163212) RGD PMID:11163212 MGI:1929371 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B ISO (PMID:14523231) RGD PMID:14523231 NCBI chr 2:247,392,195...247,662,026
Ensembl chr 2:247,403,920...247,446,882
JBrowse link
G Cibar1 CBY1 interacting BAR domain containing 1 ISO (PMID:30395363)
(MGI:6304712|PMID:30395363)
RGD PMID:30395363 MGI:6304712 NCBI chr 5:25,732,457...25,750,953
Ensembl chr 5:25,732,644...25,750,826
JBrowse link
G Col2a1 collagen type II alpha 1 chain ISO (MGI:1334159|PMID:10100048) RGD PMID:10100048 MGI:1334159 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Evx2 even-skipped homeobox 2 ISO MGI:96205 (MGI:84613|PMID:8978698) RGD PMID:8978698 MGI:84613 NCBI chr 3:61,564,917...61,581,598
Ensembl chr 3:61,578,229...61,581,598
JBrowse link
G Fbn2 fibrillin 2 ISO MGI:2157491 (MGI:1353858|PMID:10700192) RGD PMID:10700192 MGI:1353858 NCBI chr18:53,068,495...53,272,254
Ensembl chr18:53,068,495...53,181,503
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO MGI:1859647 (MGI:1327513|PMID:9916808) RGD PMID:9916808 MGI:1327513 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgf8 fibroblast growth factor 8 IBA
ISO
PMID:21873635
MGI:95518 (MGI:3056042|PMID:15328019)
RGD PMID:15328019, PMID:21873635 MGI:3056042, RGD:13792537 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Flvcr1 FLVCR heme transporter 1 ISO MGI:3776021|MGI:3776022 (MGI:3775000|PMID:18258918) RGD PMID:18258918 MGI:3775000 NCBI chr13:109,624,167...109,629,609
Ensembl chr13:109,578,074...109,629,482
JBrowse link
G Gli3 GLI family zinc finger 3 ISO (PMID:18478223), (PMID:9354785)
MGI:1856276 (MGI:1095762|PMID:9268572)
RGD PMID:9268572, PMID:9354785, PMID:18478223 MGI:1095762 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Hoxd13 homeo box D13 ISO MGI:1857397|MGI:95462 (MGI:2150573|PMID:11543619), (MGI:84613|PMID:8978698) RGD PMID:8978698, PMID:11543619 MGI:2150573, MGI:84613 NCBI chr 3:61,590,376...61,593,692
Ensembl chr 3:61,590,376...61,593,692
JBrowse link
G Idua alpha-L-iduronidase ISO MGI:2176236 (MGI:86916|PMID:9097952) RGD PMID:9097952 MGI:86916 NCBI chr14:2,041,828...2,056,762
Ensembl chr14:2,042,411...2,056,762
JBrowse link
G Ift140 intraflagellar transport 140 ISO MGI:4458412 (MGI:5635784|PMID:24009529) RGD PMID:24009529 MGI:5635784 NCBI chr10:14,373,668...14,461,509
Ensembl chr10:14,373,679...14,461,160
JBrowse link
G Iqce IQ motif containing E ISO (PMID:28488682) RGD PMID:28488682 NCBI chr12:16,030,607...16,069,872
Ensembl chr12:15,857,805...16,067,924
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta ISO MGI:2158463 (MGI:4461341|PMID:20589901) RGD PMID:20589901 MGI:4461341 NCBI chr 3:12,608,748...12,686,937
Ensembl chr 3:12,609,574...12,686,869
JBrowse link
G Lrp5 LDL receptor related protein 5 ISO MGI:1298218 (MGI:3653806|PMID:15537447) RGD PMID:15537447 MGI:3653806 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO MGI:1278315|MGI:2673982 (MGI:3055483|PMID:15469977), (MGI:3653806|PMID:15537447) RGD PMID:15469977, PMID:15537447 MGI:3055483, MGI:3653806 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Megf8 multiple EGF-like-domains 8 ISO (PMID:23063620) RGD PMID:23063620 NCBI chr 1:82,184,671...82,234,045
Ensembl chr 1:82,185,034...82,234,045
JBrowse link
G Pcnt pericentrin ISO MGI:3799303 (MGI:4438783|PMID:20096683) RGD PMID:20096683 MGI:4438783 NCBI chr20:12,943,523...13,038,615
Ensembl chr20:12,944,786...13,038,431
JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 ISO (MGI:3795695|PMID:18519639) RGD PMID:18519639 MGI:3795695 NCBI chr 1:236,031,988...236,313,858
Ensembl chr 1:236,031,988...236,313,858
JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic ISO GO:0035108 (MGI:5013998|PMID:21553379) RGD PMID:21553379 MGI:5013998 NCBI chr 6:6,427,657...6,436,974
Ensembl chr 6:6,427,657...6,436,974
JBrowse link
G Ptch1 patched 1 ISO (PMID:8681379) RGD PMID:8681379 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
G Rpgrip1l Rpgrip1-like ISO MGI:3716208 (MGI:3716248|PMID:17558409) RGD PMID:17558409 MGI:3716248 NCBI chr19:17,115,266...17,208,055
Ensembl chr19:17,115,412...17,208,055
JBrowse link
G Sik3 SIK family kinase 3 ISO MGI:5317918 (MGI:5316542|PMID:22318228) RGD PMID:22318228 MGI:5316542 NCBI chr 8:50,310,263...50,520,284
Ensembl chr 8:50,310,405...50,520,173
JBrowse link
G Tbx3 T-box transcription factor 3 ISO MGI:2655214 (MGI:2653226|PMID:12668638) RGD PMID:12668638 MGI:2653226 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
G Tbx4 T-box transcription factor 4 ISO (PMID:15106123)
(MGI:3527352|PMID:15621531)
RGD PMID:15106123, PMID:15621531 MGI:3527352 NCBI chr10:73,331,864...73,362,784
Ensembl chr10:73,333,119...73,362,783
JBrowse link
G Wnt5a Wnt family member 5A ISO MGI:1857617 (MGI:4413372|PMID:19795512) RGD PMID:19795512 MGI:4413372 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
post-embryonic forelimb morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler IEA
ISO
GO_REF:0000107
(MGI:5568807|PMID:24386478)
Ensembl
RGD
PMID:24386478 GO_REF:0000107, MGI:5568807 NCBI chr  X:76,820,110...76,979,155
Ensembl chr  X:76,692,970...76,708,878
Ensembl chr  X:76,692,970...76,708,878
JBrowse link
post-embryonic hindlimb morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir23a microRNA 23a ISO (MGI:5516374|PMID:24101522) RGD PMID:24101522 MGI:5516374 NCBI chr19:25,318,582...25,318,656
Ensembl chr19:25,318,582...25,318,656
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    developmental process 6826
      anatomical structure morphogenesis 2879
        appendage morphogenesis 175
          antennal morphogenesis + 0
          apical ectodermal ridge formation + 0
          appendage segmentation + 0
          embryonic appendage morphogenesis + 145
          fin morphogenesis + 0
          imaginal disc-derived appendage morphogenesis + 0
          limb morphogenesis + 175
          post-embryonic appendage morphogenesis + 2
Path 2
Term Annotations click to browse term
  biological_process 20020
    developmental process 6826
      anatomical structure development 6268
        multicellular organism development 5743
          appendage development 204
            appendage morphogenesis 175
              antennal morphogenesis + 0
              apical ectodermal ridge formation + 0
              appendage segmentation + 0
              embryonic appendage morphogenesis + 145
              fin morphogenesis + 0
              imaginal disc-derived appendage morphogenesis + 0
              limb morphogenesis + 175
              post-embryonic appendage morphogenesis + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.