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ONTOLOGY REPORT - ANNOTATIONS


Term:wound healing, spreading of epidermal cells
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Accession:GO:0035313 term browser browse the term
Definition:The migration of an epidermal cell along or through a wound gap that contributes to the reestablishment of a continuous epidermis.


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wound healing, spreading of epidermal cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 ISO (PMID:12453878) RGD PMID:12453878 NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335
JBrowse link
G Adam17 ADAM metallopeptidase domain 17 ISO
IEA
(PMID:14970227)
GO_REF:0000107
RGD
Ensembl
PMID:14970227 GO_REF:0000107 NCBI chr 6:43,400,525...43,448,280
Ensembl chr 6:43,400,528...43,448,280
JBrowse link
G Ajuba ajuba LIM protein ISO MGI:MGI:3578221 (MGI:MGI:3577694|PMID:15728191) RGD PMID:15728191 MGI:MGI:3577694 NCBI chr15:33,208,210...33,218,456
Ensembl chr15:33,208,216...33,218,456
JBrowse link
G Arhgap24 Rho GTPase activating protein 24 ISO
IBA
(MGI:MGI:5297730|PMID:21911940)
PMID:21873635
RGD PMID:21911940, PMID:21873635 MGI:MGI:5297730, RGD:13792537 NCBI chr14:8,383,211...8,600,526
Ensembl chr14:8,383,214...8,600,512
JBrowse link
G Col5a1 collagen type V alpha 1 chain IEA
ISO
GO_REF:0000107
(PMID:18305566)
Ensembl
RGD
PMID:18305566 GO_REF:0000107 NCBI chr 3:6,430,180...6,581,010
Ensembl chr 3:6,430,201...6,578,882
JBrowse link
G Hbegf heparin-binding EGF-like growth factor ISO (MGI:MGI:3580979|PMID:15923649) RGD PMID:15923649 MGI:MGI:3580979 NCBI chr18:29,330,302...29,340,185
Ensembl chr18:29,329,764...29,340,403
JBrowse link
G Itga5 integrin subunit alpha 5 ISO (PMID:14970227) RGD PMID:14970227 NCBI chr 7:144,970,444...144,993,652
Ensembl chr 7:144,970,444...144,993,652
JBrowse link
G Mmp12 matrix metallopeptidase 12 ISO
IEA
(PMID:15802269)
GO_REF:0000107
RGD
Ensembl
PMID:15802269 GO_REF:0000107 NCBI chr 8:5,594,717...5,616,494
Ensembl chr 8:5,606,592...5,616,493
JBrowse link
G Msx2 msh homeobox 2 ISO
IEA
MGI:MGI:1926381 (MGI:MGI:4868690|PMID:19769717)
GO_REF:0000107
RGD
Ensembl
PMID:19769717 GO_REF:0000107, MGI:MGI:4868690 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
G Plet1 placenta expressed transcript 1 ISO
IBA
ISS
(MGI:MGI:4453442|PMID:20130590)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20130590, PMID:21873635 GO_REF:0000024, MGI:MGI:4453442, RGD:13792537 NCBI chr 8:54,925,624...54,937,068
Ensembl chr 8:54,925,607...54,937,177
JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta IMP RGD PMID:16844921 RGD:1624146 NCBI chr 1:191,829,547...191,883,991
Ensembl chr 1:191,829,555...191,884,298
JBrowse link
G Scnn1g sodium channel epithelial 1 subunit gamma IMP RGD PMID:16844921 RGD:1624146 NCBI chr 1:191,704,397...191,738,271
Ensembl chr 1:191,704,311...191,738,268
JBrowse link
G Wnt7a Wnt family member 7A ISO (PMID:15802269) RGD PMID:15802269 NCBI chr 4:122,994,425...123,040,609
Ensembl chr 4:122,994,425...123,040,609
JBrowse link
negative regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 ISO (PMID:24859005) RGD PMID:24859005 NCBI chr13:34,365,038...34,584,651
Ensembl chr13:34,365,147...34,584,651
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 ISO
IEA
(PMID:24859005)
GO_REF:0000107
RGD
Ensembl
PMID:24859005 GO_REF:0000107 NCBI chr 8:122,003,719...122,185,495
Ensembl chr 8:122,003,916...122,185,495
JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 ISO (PMID:24859005) RGD PMID:24859005 NCBI chr11:60,042,879...60,051,229
Ensembl chr11:57,265,732...57,481,589
JBrowse link
G Pten phosphatase and tensin homolog ISO (PMID:27919618) RGD PMID:27919618 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
positive regulation of wound healing, spreading of epidermal cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fermt1 fermitin family member 1 ISO UniProtKB:Q96AC1 (PMID:21356350) RGD PMID:21356350 NCBI chr 3:125,566,744...125,607,864
Ensembl chr 3:125,566,643...125,607,735
JBrowse link
G Fermt2 fermitin family member 2 ISO (PMID:21356350) RGD PMID:21356350 NCBI chr15:19,807,806...19,876,557
Ensembl chr15:19,807,808...19,876,408
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO (PMID:27919618) RGD PMID:27919618 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Rreb1 ras responsive element binding protein 1 ISO (PMID:18394891) RGD PMID:18394891 NCBI chr17:27,539,137...27,718,878
Ensembl chr17:27,539,133...27,665,266
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    locomotion 1951
      cell motility 1759
        cell migration 1581
          wound healing, spreading of cells 38
            wound healing, spreading of epidermal cells 21
              Wnt signaling pathway involved in wound healing, spreading of epidermal cells 0
              negative regulation of wound healing, spreading of epidermal cells 4
              positive regulation of wound healing, spreading of epidermal cells 4
              regulation of wound healing, spreading of epidermal cells + 8
Path 2
Term Annotations click to browse term
  biological_process 20027
    developmental process 6827
      anatomical structure development 6269
        tissue development 2099
          tissue morphogenesis 698
            morphogenesis of an epithelium 586
              morphogenesis of an epithelial sheet 65
                epiboly 39
                  epiboly involved in wound healing 38
                    wound healing, spreading of cells 38
                      wound healing, spreading of epidermal cells 21
                        Wnt signaling pathway involved in wound healing, spreading of epidermal cells 0
                        negative regulation of wound healing, spreading of epidermal cells 4
                        positive regulation of wound healing, spreading of epidermal cells 4
                        regulation of wound healing, spreading of epidermal cells + 8
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.