Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:hair cell differentiation
go back to main search page
Accession:GO:0035315 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of a hair cell.


show annotations for term's descendants           Sort by:
 
hair cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ISO MGI:MGI:2183949 (MGI:MGI:3692802|PMID:17020410)
(PMID:11335038)
RGD PMID:11335038, PMID:17020410 MGI:MGI:3692802 NCBI chr 1:80,293,574...80,307,334
Ensembl chr 1:80,293,566...80,307,344
JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit ISO
IBA
(PMID:11335038)
PMID:21873635
RGD PMID:11335038, PMID:21873635 RGD:13792537 NCBI chr18:25,037,668...25,068,380
Ensembl chr18:25,037,625...25,068,389
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IMP RGD PMID:11023859 RGD:9685386 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Ush2a usherin ISO (PMID:16301217) RGD PMID:16301217 NCBI chr13:106,750,738...107,434,195
Ensembl chr13:106,751,625...107,427,329
JBrowse link
auditory receptor cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alg10 ALG10, alpha-1,2-glucosyltransferase ISO MGI:MGI:2671810 (MGI:MGI:5568671|PMID:24303013) RGD PMID:24303013 MGI:MGI:5568671 NCBI chr 7:131,330,913...131,336,183
Ensembl chr 7:131,330,913...131,336,183
JBrowse link
G Clrn1 clarin 1 ISO MGI:MGI:3850171 (MGI:MGI:3849925|PMID:19414487) RGD PMID:19414487 MGI:MGI:3849925 NCBI chr 2:149,049,925...149,088,787
Ensembl chr 2:149,049,925...149,088,787
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 ISO
IEA
MGI:MGI:3574787 (MGI:MGI:3527944|PMID:15630379)
GO_REF:0000107
RGD
Ensembl
PMID:15630379 GO_REF:0000107, MGI:MGI:3527944 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Lrtomt leucine rich transmembrane and O-methyltransferase domain containing ISO (MGI:MGI:3799635|PMID:18794526) RGD PMID:18794526 MGI:MGI:3799635 NCBI chr 1:166,985,468...166,989,681
Ensembl chr 1:166,986,013...166,988,062
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 ISO (MGI:MGI:5477842|PMID:23533177) RGD PMID:23533177 MGI:MGI:5477842 NCBI chr10:61,456,144...61,577,412
Ensembl chr10:61,456,145...61,577,412
JBrowse link
G Pdzd7 PDZ domain containing 7 ISO MGI:MGI:4433578 (MGI:MGI:5565635|PMID:24334608) RGD PMID:24334608 MGI:MGI:5565635 NCBI chr 1:264,776,393...264,796,206
Ensembl chr 1:264,776,398...264,794,938
JBrowse link
G Slc4a7 solute carrier family 4 member 7 ISO
IBA
MGI:MGI:2682641 (MGI:MGI:2680888|PMID:12808454)
PMID:21873635
RGD PMID:12808454, PMID:21873635 MGI:MGI:2680888, RGD:13792537 NCBI chr15:11,832,611...11,912,923
Ensembl chr15:11,836,286...11,912,916
JBrowse link
G Tmc1 transmembrane channel-like 1 ISO MGI:MGI:5427097 (MGI:MGI:5320864|PMID:22105175) RGD PMID:22105175 MGI:MGI:5320864 NCBI chr 1:238,336,919...238,525,792
Ensembl chr 1:238,336,919...238,441,500
JBrowse link
auditory receptor cell fate commitment term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 NAS PMID:10878608 UniProt PMID:10878608 RGD:8553270 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
G Jag2 jagged canonical Notch ligand 2 IEA
ISS
ISO
GO_REF:0000107
PMID:10080181
(MGI:MGI:1332721|PMID:10080181)
Ensembl
RGD
PMID:10080181, PMID:10080181 GO_REF:0000107, MGI:MGI:1332721, RGD:8553713 NCBI chr 6:137,711,144...137,733,331
Ensembl chr 6:137,711,155...137,733,026
JBrowse link
G Notch1 notch receptor 1 ISO MGI:MGI:3044585|MGI:MGI:3046196 (MGI:MGI:3833041|PMID:19154718) RGD PMID:19154718 MGI:MGI:3833041 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO MGI:MGI:3046196|MGI:MGI:3583755 (MGI:MGI:3833041|PMID:19154718) RGD PMID:19154718 MGI:MGI:3833041 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
auditory receptor cell fate determination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 ISO (MGI:MGI:3611666|PMID:16407553) RGD PMID:16407553 MGI:MGI:3611666 NCBI chr 4:95,498,003...95,500,098
Ensembl chr 4:95,498,003...95,500,089
JBrowse link
auditory receptor cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 ISO MGI:MGI:2155983 (MGI:MGI:1339217|PMID:10364557) RGD PMID:10364557 MGI:MGI:1339217 NCBI chr 4:95,498,003...95,500,098
Ensembl chr 4:95,498,003...95,500,089
JBrowse link
auditory receptor cell morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir96 microRNA 96 ISO MGI:MGI:4354110 (MGI:MGI:4353582|PMID:19363478) RGD PMID:19363478 MGI:MGI:4353582 NCBI chr 4:57,463,366...57,463,471
Ensembl chr 4:57,463,366...57,463,471
JBrowse link
G Rac1 Rac family small GTPase 1 ISO MGI:MGI:2663662|MGI:MGI:2663669 (MGI:MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:MGI:4430014 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Scrib scribble planar cell polarity protein ISO MGI:MGI:2139764 (MGI:MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:MGI:4439427 NCBI chr 7:117,105,810...117,128,802
Ensembl chr 7:117,105,810...117,128,798
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO MGI:MGI:2145950|MGI:MGI:4440621 (MGI:MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:MGI:4439427 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
G Slitrk6 SLIT and NTRK-like family, member 6 ISO MGI:MGI:4417931 (MGI:MGI:4413621|PMID:19936227) RGD PMID:19936227 MGI:MGI:4413621 NCBI chr15:95,507,632...95,514,259
Ensembl chr15:95,507,640...95,514,259
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector ISO
IEA
MGI:MGI:5558098 (MGI:MGI:5544506|PMID:24302887)
GO_REF:0000107
RGD
Ensembl
PMID:24302887 GO_REF:0000107, MGI:MGI:5544506 NCBI chr14:106,393,959...106,759,511
Ensembl chr14:106,393,959...106,759,505
JBrowse link
auditory receptor cell stereocilium organization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO MGI:MGI:1856799 (MGI:MGI:3709803|PMID:11875276) RGD PMID:11875276 MGI:MGI:3709803 NCBI chr 4:145,704,779...145,948,997
Ensembl chr 4:145,703,046...146,016,325
JBrowse link
G Cdh23 cadherin-related 23 ISO MGI:MGI:1856228|MGI:MGI:1856681|MGI:MGI:1891428|MGI:MGI:2154548|MGI:MGI:2154549 (MGI:MGI:1929001|PMID:11138008), (MGI:MGI:1933915|PMID:11322776), (MGI:MGI:3526751|PMID:15537665), (MGI:MGI:3625226|PMID:12121736), (MGI:MGI:3686545|PMID:17050716), (MGI:MGI:5468200|PMID:23217710), (MGI:MGI:75953|PMID:7610888), (MGI:MGI:81497|PMID:8790740), (MGI:MGI:86134|PMID:9039475) RGD PMID:7610888, PMID:8790740, PMID:9039475, PMID:11138008, PMID:11322776, PMID:12121736, PMID:15537665, PMID:17050716, PMID:23217710 MGI:MGI:1929001, MGI:MGI:1933915, MGI:MGI:3526751, MGI:MGI:3625226, MGI:MGI:3686545, MGI:MGI:5468200, MGI:MGI:75953, MGI:MGI:81497, MGI:MGI:86134 NCBI chr20:29,857,018...30,263,758
Ensembl chr20:29,857,637...29,990,111
JBrowse link
G Clic5 chloride intracellular channel 5 ISO
IBA
MGI:MGI:3663254 (MGI:MGI:3663248|PMID:17021174)
PMID:21873635
RGD PMID:17021174, PMID:21873635 MGI:MGI:3663248, RGD:13792537 NCBI chr 9:19,121,676...19,372,673
Ensembl chr 9:19,121,677...19,372,673
JBrowse link
G Clrn1 clarin 1 IEA
ISO
GO_REF:0000107
MGI:MGI:3850171 (MGI:MGI:3849925|PMID:19414487), (MGI:MGI:4353469|PMID:19423712)
Ensembl
RGD
PMID:19414487, PMID:19423712 GO_REF:0000107, MGI:MGI:3849925, MGI:MGI:4353469 NCBI chr 2:149,049,925...149,088,787
Ensembl chr 2:149,049,925...149,088,787
JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 ISO MGI:MGI:2139535|MGI:MGI:6281113|MGI:MGI:6281114 (MGI:MGI:6278501|PMID:30380417) RGD PMID:30380417 MGI:MGI:6278501 NCBI chr18:36,308,925...36,334,643
Ensembl chr18:36,308,925...36,322,320
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 ISO MGI:MGI:3055797|MGI:MGI:3718054 (MGI:MGI:3578102|PMID:15905332), (MGI:MGI:3759710|PMID:17876667), (MGI:MGI:5468200|PMID:23217710) RGD PMID:15905332, PMID:17876667, PMID:23217710 MGI:MGI:3578102, MGI:MGI:3759710, MGI:MGI:5468200 NCBI chr20:5,815,837...5,826,137
Ensembl chr20:5,815,837...5,826,137
JBrowse link
G Myo3a myosin IIIA ISO MGI:MGI:2448580 (MGI:MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:MGI:5766107 NCBI chr17:88,952,635...89,167,538
Ensembl chr17:88,963,981...89,167,018
JBrowse link
G Myo3b myosin IIIB ISO MGI:MGI:2183924 (MGI:MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:MGI:5766107 NCBI chr 3:56,355,433...56,717,740
Ensembl chr 3:56,355,431...56,584,547
JBrowse link
G Myo7a myosin VIIA ISO MGI:MGI:1860092|MGI:MGI:2155422 (MGI:MGI:2156358|PMID:11753415), (MGI:MGI:3625226|PMID:12121736), (MGI:MGI:3686545|PMID:17050716) RGD PMID:11753415, PMID:12121736, PMID:17050716 MGI:MGI:2156358, MGI:MGI:3625226, MGI:MGI:3686545 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508
JBrowse link
G Pcdh15 protocadherin related 15 ISO MGI:MGI:1855958|MGI:MGI:1856394|MGI:MGI:1856396|MGI:MGI:1890219|MGI:MGI:2151877|MGI:MGI:3505691 (MGI:MGI:1928787|PMID:10978835), (MGI:MGI:3526751|PMID:15537665), (MGI:MGI:3619110|PMID:11124469), (MGI:MGI:3654702|PMID:16887306), (MGI:MGI:5468200|PMID:23217710) RGD PMID:10978835, PMID:11124469, PMID:15537665, PMID:16887306, PMID:23217710 MGI:MGI:1928787, MGI:MGI:3526751, MGI:MGI:3619110, MGI:MGI:3654702, MGI:MGI:5468200 NCBI chr20:14,952,213...15,334,745
Ensembl chr20:14,952,213...15,334,745
JBrowse link
G Pdzd7 PDZ domain containing 7 ISO
IBA
MGI:MGI:4433578 (MGI:MGI:5565635|PMID:24334608)
PMID:21873635
RGD PMID:24334608, PMID:21873635 MGI:MGI:5565635, RGD:13792537 NCBI chr 1:264,776,393...264,796,206
Ensembl chr 1:264,776,398...264,794,938
JBrowse link
G Pls1 plastin 1 IEA
ISO
GO_REF:0000107
(MGI:MGI:5608770|PMID:25124451)
Ensembl
RGD
PMID:25124451 GO_REF:0000107, MGI:MGI:5608770 NCBI chr 8:103,557,361...103,659,625
Ensembl chr 8:103,557,364...103,608,913
JBrowse link
G Rest RE1-silencing transcription factor ISS
ISO
GO_REF:0000024
(MGI:MGI:6193260|PMID:29961578)
UniProt
RGD
PMID:29961578 GO_REF:0000024, MGI:MGI:6193260 NCBI chr14:33,131,985...33,152,019
Ensembl chr14:33,134,511...33,164,141
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 ISO (MGI:MGI:5789047|PMID:27269051) RGD PMID:27269051 MGI:MGI:5789047 NCBI chr17:42,324,594...42,549,907
Ensembl chr17:42,324,594...42,422,053
JBrowse link
G Scrib scribble planar cell polarity protein ISO MGI:MGI:2139764 (MGI:MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:MGI:4439427 NCBI chr 7:117,105,810...117,128,802
Ensembl chr 7:117,105,810...117,128,798
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO MGI:MGI:2145950|MGI:MGI:4440621 (MGI:MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:MGI:4439427 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 ISO MGI:MGI:3526430 (MGI:MGI:5578076|PMID:24920589) RGD PMID:24920589 MGI:MGI:5578076 NCBI chr10:103,713,045...103,730,145
Ensembl chr10:103,713,045...103,730,145
JBrowse link
G Sod1 superoxide dismutase 1 ISS
ISO
GO_REF:0000024
MGI:MGI:1857872 (MGI:MGI:1344578|PMID:10466888), (MGI:MGI:3700629|PMID:10464373)
UniProt
RGD
PMID:10464373, PMID:10466888 GO_REF:0000024, MGI:MGI:1344578, MGI:MGI:3700629 NCBI chr11:30,363,282...30,368,858
Ensembl chr11:30,363,280...30,368,862
JBrowse link
G Strc stereocilin ISO MGI:MGI:3818633 (MGI:MGI:3818235|PMID:18849963), (MGI:MGI:5430850|PMID:21165971) RGD PMID:18849963, PMID:21165971 MGI:MGI:3818235, MGI:MGI:5430850 NCBI chr 3:113,324,403...113,343,513
Ensembl chr 3:113,324,698...113,342,675
JBrowse link
G Tprn taperin ISO MGI:MGI:2685697 (MGI:MGI:6278501|PMID:30380417) RGD PMID:30380417 MGI:MGI:6278501 NCBI chr 3:2,480,232...2,487,710
Ensembl chr 3:2,480,232...2,487,710
JBrowse link
G Triobp TRIO and F-actin binding protein ISO MGI:MGI:4881773 (MGI:MGI:4881391|PMID:20510926) RGD PMID:20510926 MGI:MGI:4881391 NCBI chr 7:120,173,892...120,237,145
Ensembl chr 7:120,176,530...120,230,420
JBrowse link
G Whrn whirlin ISO
IBA
IEA
MGI:MGI:4432119 (MGI:MGI:5796227|PMID:27117407)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:27117407, PMID:21873635 GO_REF:0000107, MGI:MGI:5796227, RGD:13792537 NCBI chr 5:79,235,541...79,317,206
Ensembl chr 5:79,234,950...79,317,206
JBrowse link
inner ear auditory receptor cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 ISO MGI:MGI:2155983|MGI:MGI:2155984 (MGI:MGI:2178088|PMID:11973280), (MGI:MGI:3525036|PMID:15543141) RGD PMID:11973280, PMID:15543141 MGI:MGI:2178088, MGI:MGI:3525036 NCBI chr 4:95,498,003...95,500,098
Ensembl chr 4:95,498,003...95,500,089
JBrowse link
G Cdh23 cadherin-related 23 ISO MGI:MGI:1856228 (MGI:MGI:3625226|PMID:12121736) RGD PMID:12121736 MGI:MGI:3625226 NCBI chr20:29,857,018...30,263,758
Ensembl chr20:29,857,637...29,990,111
JBrowse link
G Cux1 cut-like homeobox 1 ISO MGI:MGI:2388352 (MGI:MGI:2149924|PMID:11544187) RGD PMID:11544187 MGI:MGI:2149924 NCBI chr12:23,150,886...23,470,095
Ensembl chr12:23,151,180...23,445,074
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor ISO MGI:MGI:2449921 (MGI:MGI:2429425|PMID:12441305) RGD PMID:12441305 MGI:MGI:2429425 NCBI chr14:3,058,035...3,073,332
Ensembl chr14:3,058,993...3,068,371
JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 ISO MGI:MGI:2681910 (MGI:MGI:2680830|PMID:12405956) RGD PMID:12405956 MGI:MGI:2680830 NCBI chr14:41,663,688...41,787,331
Ensembl chr14:41,663,688...41,786,084
JBrowse link
G Jag1 jagged canonical Notch ligand 1 IMP
IEA
ISO
GO_REF:0000107
MGI:MGI:1932522|MGI:MGI:3623344 (MGI:MGI:3621102|PMID:16495313)
Ensembl
RGD
PMID:16495313, PMID:10887092 GO_REF:0000107, MGI:MGI:3621102, RGD:1582345 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ISO MGI:MGI:3050114 (MGI:MGI:3052624|PMID:15328414), (MGI:MGI:3697555|PMID:17074442) RGD PMID:15328414, PMID:17074442 MGI:MGI:3052624, MGI:MGI:3697555 NCBI chr15:344,204...1,048,849
Ensembl chr15:344,360...1,047,956
JBrowse link
G Mcoln3 mucolipin 3 ISO MGI:MGI:1856230 (MGI:MGI:2445676|PMID:12403827) RGD PMID:12403827 MGI:MGI:2445676 NCBI chr 2:251,930,532...252,007,722
Ensembl chr 2:251,983,339...252,007,560
JBrowse link
G Myo6 myosin VI ISO
IBA
MGI:MGI:1856555 (MGI:MGI:1346380|PMID:10525338), (MGI:MGI:53523|PMID:5980120), (MGI:MGI:77423|PMID:7493015)
PMID:21873635
RGD PMID:5980120, PMID:7493015, PMID:10525338, PMID:21873635 MGI:MGI:1346380, MGI:MGI:53523, MGI:MGI:77423, RGD:13792537 NCBI chr 8:87,583,649...87,731,271
Ensembl chr 8:87,630,916...87,731,269
JBrowse link
G Myo7a myosin VIIA ISO MGI:MGI:1860092|MGI:MGI:2155422|MGI:MGI:3511858 (MGI:MGI:2156358|PMID:11753415), (MGI:MGI:3510503|PMID:15389316), (MGI:MGI:3625226|PMID:12121736) RGD PMID:11753415, PMID:12121736, PMID:15389316 MGI:MGI:2156358, MGI:MGI:3510503, MGI:MGI:3625226 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508
JBrowse link
G Pcdh15 protocadherin related 15 ISO MGI:MGI:1856394 (MGI:MGI:3616414|PMID:16481439) RGD PMID:16481439 MGI:MGI:3616414 NCBI chr20:14,952,213...15,334,745
Ensembl chr20:14,952,213...15,334,745
JBrowse link
G Pls3 plastin 3 IEP RGD PMID:12378542 RGD:731234 NCBI chr  X:119,030,311...119,124,268
Ensembl chr  X:119,030,419...119,124,250
JBrowse link
G Pou4f3 POU class 4 homeobox 3 ISO MGI:MGI:1857425|MGI:MGI:2176270 (MGI:MGI:2451279|PMID:12585968), (MGI:MGI:80981|PMID:8637595) RGD PMID:8637595, PMID:12585968 MGI:MGI:2451279, MGI:MGI:80981 NCBI chr18:36,713,869...36,716,461
Ensembl chr18:36,713,869...36,716,461
JBrowse link
G Ush1c USH1 protein network component harmonin ISO
IBA
MGI:MGI:2651858|MGI:MGI:2651859 (MGI:MGI:2675093|PMID:14519688)
PMID:21873635
RGD PMID:14519688, PMID:21873635 MGI:MGI:2675093, RGD:13792537 NCBI chr 1:102,207,096...102,256,779
Ensembl chr 1:102,207,096...102,255,459
JBrowse link
negative regulation of inner ear auditory receptor cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 ISO
IEA
MGI:MGI:1932522|MGI:MGI:3044907 (MGI:MGI:3621102|PMID:16495313)
GO_REF:0000107
RGD
Ensembl
PMID:16495313 GO_REF:0000107, MGI:MGI:3621102 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IEA
ISO
GO_REF:0000107
MGI:MGI:104876|MGI:MGI:1341800|MGI:MGI:2149672 (MGI:MGI:1889857|PMID:11023859), (MGI:MGI:2136156|PMID:11425898), (MGI:MGI:4949990|PMID:21300049)
Ensembl
RGD
PMID:11023859, PMID:11425898, PMID:21300049 GO_REF:0000107, MGI:MGI:1889857, MGI:MGI:2136156, MGI:MGI:4949990 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hes5 hes family bHLH transcription factor 5 ISO MGI:MGI:104853|MGI:MGI:1341800|MGI:MGI:2149674 (MGI:MGI:2136156|PMID:11425898), (MGI:MGI:4949990|PMID:21300049) RGD PMID:11425898, PMID:21300049 MGI:MGI:2136156, MGI:MGI:4949990 NCBI chr 5:172,364,421...172,365,188
Ensembl chr 5:172,364,421...172,365,188
JBrowse link
G Notch1 notch receptor 1 ISO MGI:MGI:3044585 (MGI:MGI:5617067|PMID:25535395) RGD PMID:25535395 MGI:MGI:5617067 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
neuromast hair cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc44a4 solute carrier family 44, member 4 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr20:4,593,389...4,609,641
Ensembl chr20:4,593,389...4,609,631
JBrowse link
positive regulation of inner ear auditory receptor cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 ISO (MGI:MGI:1889857|PMID:11023859), (MGI:MGI:3833041|PMID:19154718) RGD PMID:11023859, PMID:19154718 MGI:MGI:1889857, MGI:MGI:3833041 NCBI chr 4:95,498,003...95,500,098
Ensembl chr 4:95,498,003...95,500,089
JBrowse link
posterior lateral line neuromast hair cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmem132e transmembrane protein 132E ISO UniProtKB:L7VG99 (PMID:25331638) RGD PMID:25331638 NCBI chr10:69,735,534...69,794,975
Ensembl chr10:69,737,328...69,794,975
JBrowse link
regulation of inner ear auditory receptor cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 ISO MGI:MGI:104853|MGI:MGI:104876 (MGI:MGI:4949990|PMID:21300049) RGD PMID:21300049 MGI:MGI:4949990 NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 ISO MGI:MGI:104654 (MGI:MGI:3833041|PMID:19154718) RGD PMID:19154718 MGI:MGI:3833041 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Mycl MYCL proto-oncogene, bHLH transcription factor ISO MGI:MGI:97357 (MGI:MGI:5468771|PMID:23022312) RGD PMID:23022312 MGI:MGI:5468771 NCBI chr 5:140,691,947...140,698,837
Ensembl chr 5:140,692,779...140,698,609
JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor ISO
IEA
MGI:MGI:96799 (MGI:MGI:5468771|PMID:23022312)
GO_REF:0000107
RGD
Ensembl
PMID:23022312 GO_REF:0000107, MGI:MGI:5468771 NCBI chr 6:38,222,554...38,228,419
Ensembl chr 6:38,222,555...38,228,379
JBrowse link
G Notch1 notch receptor 1 ISO MGI:MGI:3044585 (MGI:MGI:5617067|PMID:25535395) RGD PMID:25535395 MGI:MGI:5617067 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
regulation of inner ear auditory receptor cell fate specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esrp1 epithelial splicing regulatory protein 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:5915403|PMID:29107558)
UniProt
RGD
PMID:29107558 GO_REF:0000024, MGI:MGI:5915403 NCBI chr 5:24,576,988...24,631,758
Ensembl chr 5:24,576,991...24,631,698
JBrowse link
vestibular receptor cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 ISO (MGI:MGI:3512691|PMID:11276175) RGD PMID:11276175 MGI:MGI:3512691 NCBI chr14:41,663,688...41,787,331
Ensembl chr14:41,663,688...41,786,084
JBrowse link
vestibular receptor cell morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptprq protein tyrosine phosphatase, receptor type, Q ISO
IEA
MGI:MGI:2679316 (MGI:MGI:5315778|PMID:22357859)
GO_REF:0000107
RGD
Ensembl
PMID:22357859 GO_REF:0000107, MGI:MGI:5315778 NCBI chr 7:49,763,657...50,034,932
Ensembl chr 7:49,763,657...50,034,932
JBrowse link
vestibular receptor cell stereocilium organization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pls1 plastin 1 IEA
ISO
GO_REF:0000107
(MGI:MGI:5608770|PMID:25124451)
Ensembl
RGD
PMID:25124451 GO_REF:0000107, MGI:MGI:5608770 NCBI chr 8:103,557,361...103,659,625
Ensembl chr 8:103,557,364...103,608,913
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    developmental process 6827
      cellular developmental process 4459
        cell differentiation 4364
          neuron differentiation 1617
            hair cell differentiation 60
              inner ear auditory receptor cell differentiation + 54
              neuromast hair cell differentiation + 2
              non-sensory hair organization + 0
              vestibular receptor cell differentiation + 3
Path 2
Term Annotations click to browse term
  biological_process 20028
    developmental process 6827
      anatomical structure development 6269
        multicellular organism development 5744
          system development 5280
            nervous system development 2722
              neurogenesis 1938
                generation of neurons 1781
                  neuron differentiation 1617
                    hair cell differentiation 60
                      inner ear auditory receptor cell differentiation + 54
                      neuromast hair cell differentiation + 2
                      non-sensory hair organization + 0
                      vestibular receptor cell differentiation + 3
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.