ONTOLOGY REPORT - ANNOTATIONS


Term:protein localization to synapse
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Accession:GO:0035418 term browser browse the term
Definition:Any process in which a protein is transported to, and/or maintained at the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.
Synonyms:exact_synonym: protein localisation to synapse


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protein localization to synapse term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asic2 acid sensing ion channel subunit 2 JBrowse link 10 68,247,800 69,347,223 RGD:1624291
RGD:1600115
G Baiap2 BAI1-associated protein 2 JBrowse link 10 109,107,326 109,187,458 RGD:9684984
G Bsn bassoon (presynaptic cytomatrix protein) JBrowse link 8 116,873,721 116,965,396 RGD:1624291
RGD:1600115
G Cdk5 cyclin-dependent kinase 5 JBrowse link 4 7,282,945 7,287,427 RGD:1624291
RGD:1600115
G Dlg4 discs large MAGUK scaffold protein 4 JBrowse link 10 56,625,845 56,655,543 RGD:1624291
RGD:8553937
G Dlgap1 DLG associated protein 1 JBrowse link 9 118,277,046 119,159,807 RGD:8553458
G Homer1 homer scaffold protein 1 JBrowse link 2 22,909,550 23,012,303 RGD:8554389
G Klc1 kinesin light chain 1 JBrowse link 6 136,330,151 136,373,716 RGD:5683640
G LRRTM1 leucine rich repeat transmembrane neuronal 1 JBrowse link 4 108,300,927 108,316,373 RGD:1624291
RGD:1600115
G Mpp4 membrane palmitoylated protein 4 JBrowse link 9 65,917,917 65,961,274 RGD:1624291
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:1600115
RGD:1624291
G Nlgn2 neuroligin 2 JBrowse link 10 56,431,586 56,444,847 RGD:1600115
RGD:1624291
G Nphs1 NPHS1 adhesion molecule, nephrin JBrowse link 1 88,922,346 88,950,560 RGD:1600115
RGD:1624291
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:1624291
RGD:1600115
G Pclo piccolo (presynaptic cytomatrix protein) JBrowse link 4 16,454,904 17,058,921 RGD:1624291
G Reln reelin JBrowse link 4 9,347,533 9,774,257 RGD:1624291
G Shank1 SH3 and multiple ankyrin repeat domains 1 JBrowse link 1 100,297,137 100,344,377 RGD:1624291
RGD:1600115
anterograde axonal protein transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dlg2 discs large MAGUK scaffold protein 2 JBrowse link 1 154,916,274 157,274,077 RGD:1600115
RGD:1624291
G Hspb1 heat shock protein family B (small) member 1 JBrowse link 12 23,839,390 23,841,051 RGD:1600115
RGD:1624291
G Kif5a kinesin family member 5A JBrowse link 7 70,515,832 70,552,897 RGD:13673742
G Kif5b kinesin family member 5B JBrowse link 17 54,181,416 54,219,048 RGD:13673742
G Kif5c kinesin family member 5C JBrowse link 3 35,014,157 35,257,417 RGD:13673742
G Map1a microtubule-associated protein 1A JBrowse link 3 113,251,918 113,272,193 RGD:1624291
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 JBrowse link 10 14,259,394 14,299,276 RGD:13673858
RGD:1624291
G Rab27b RAB27B, member RAS oncogene family JBrowse link 18 68,486,006 68,644,595 RGD:13673858
anterograde axonal transport of messenger ribonucleoprotein complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Terf2 telomeric repeat binding factor 2 JBrowse link 19 39,271,992 39,301,506 RGD:13702251
anterograde dendritic transport of messenger ribonucleoprotein complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kif5c kinesin family member 5C JBrowse link 3 35,014,157 35,257,417 RGD:12050142
G Stau2 staufen double-stranded RNA binding protein 2 JBrowse link 5 2,257,910 2,497,429 RGD:10043164
anterograde dendritic transport of neurotransmitter receptor complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kif17 kinesin family member 17 JBrowse link 5 156,628,409 156,665,752 RGD:1624291
RGD:13792537
G Kif5a kinesin family member 5A JBrowse link 7 70,515,832 70,552,897 RGD:1600115
RGD:13792537
RGD:1624291
establishment of protein localization to postsynaptic membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rapsn receptor-associated protein of the synapse JBrowse link 3 79,859,815 79,869,486 RGD:8549750
exocytic insertion of neurotransmitter receptor to postsynaptic membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cplx1 complexin 1 JBrowse link 14 2,194,895 2,226,610 RGD:1600115
RGD:1624291
G Snap23 synaptosome associated protein 23 JBrowse link 3 112,333,972 112,362,960 RGD:12050145
G Snap25 synaptosome associated protein 25 JBrowse link 3 129,697,408 129,788,417 RGD:1624291
G Snap47 synaptosome associated protein 47 JBrowse link 10 45,757,196 45,798,734 RGD:1600115
RGD:1624291
G Stx1b syntaxin 1B JBrowse link 1 199,251,842 199,270,465 RGD:12050145
RGD:13792537
G Stx3 syntaxin 3 JBrowse link 1 228,137,781 228,195,004 RGD:1624291
RGD:13792537
G Stx4 syntaxin 4 JBrowse link 1 199,287,384 199,295,606 RGD:13702188
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:12050145
RGD:1624291
gephyrin clustering involved in postsynaptic density assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nlgn2 neuroligin 2 JBrowse link 10 56,431,586 56,444,847 RGD:1624291
RGD:1600115
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:1600115
RGD:1624291
G Nrxn2 neurexin 2 JBrowse link 1 221,792,191 221,908,047 RGD:1600115
RGD:1624291
negative regulation of receptor localization to synapse term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 JBrowse link 1 220,474,485 220,480,723 RGD:10400859
neurotransmitter receptor localization to postsynaptic specialization membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam22 ADAM metallopeptidase domain 22 JBrowse link 4 22,864,485 23,002,969 RGD:1624291
G Cacng2 calcium voltage-gated channel auxiliary subunit gamma 2 JBrowse link 7 119,228,112 119,353,332 RGD:1624291
G Cacng3 calcium voltage-gated channel auxiliary subunit gamma 3 JBrowse link 1 192,613,766 192,708,371 RGD:1624291
G Cacng7 calcium voltage-gated channel auxiliary subunit gamma 7 JBrowse link 1 64,374,547 64,405,380 RGD:1624291
G Cnih3 cornichon family AMPA receptor auxiliary protein 3 JBrowse link 13 99,663,150 99,770,625 RGD:1624291
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link 11 72,164,566 72,378,895 RGD:1600115
RGD:1624291
RGD:13702333
G Dlg2 discs large MAGUK scaffold protein 2 JBrowse link 1 154,916,274 157,274,077 RGD:1600115
RGD:1624291
G Dlg4 discs large MAGUK scaffold protein 4 JBrowse link 10 56,625,845 56,655,543 RGD:1600115
RGD:1624291
G Git1 GIT ArfGAP 1 JBrowse link 10 62,656,000 62,664,467 RGD:13702191
G Gphn gephyrin JBrowse link 6 101,327,874 101,859,169 RGD:13702318
RGD:1624291
G Kalrn kalirin, RhoGEF kinase JBrowse link 11 69,484,293 70,025,682 RGD:12050112
G Lgi1 leucine-rich, glioma inactivated 1 JBrowse link 1 256,955,944 256,996,835 RGD:1600115
RGD:1624291
G Nptx1 neuronal pentraxin 1 JBrowse link 10 108,682,637 108,691,592 RGD:13702141
G Nptx2 neuronal pentraxin 2 JBrowse link 12 12,014,638 12,025,547 RGD:13702159
G Nptxr neuronal pentraxin receptor JBrowse link 7 121,011,678 121,029,754 RGD:13702245
neurotransmitter receptor transport postsynaptic membrane to endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Erbin erbb2 interacting protein JBrowse link 2 33,880,860 33,952,806 RGD:13792537
G Lrrc7 leucine rich repeat containing 7 JBrowse link 2 264,910,594 265,300,860 RGD:13792537
G Scrib scribble planar cell polarity protein JBrowse link 7 117,105,810 117,128,802 RGD:12050130
RGD:13792537
neurotransmitter receptor transport to postsynaptic membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clstn1 calsyntenin 1 JBrowse link 5 166,533,262 166,601,686 RGD:1600115
RGD:1624291
G Mapk10 mitogen activated protein kinase 10 JBrowse link 14 8,079,955 8,371,508 RGD:13702338
G Rab8a RAB8A, member RAS oncogene family JBrowse link 16 19,355,047 19,376,776 RGD:2306456
RGD:13792537
neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arhgap44 Rho GTPase activating protein 44 JBrowse link 10 51,501,547 51,669,546 RGD:1600115
RGD:13792537
RGD:1624291
G Erbin erbb2 interacting protein JBrowse link 2 33,880,860 33,952,806 RGD:13792537
G Grip1 glutamate receptor interacting protein 1 JBrowse link 7 64,672,723 64,854,939 RGD:1600115
RGD:13792537
RGD:1624291
G Grip2 glutamate receptor interacting protein 2 JBrowse link 4 123,585,184 123,636,040 RGD:1624291
RGD:13792537
G Gripap1 GRIP1 associated protein 1 JBrowse link X 15,523,929 15,553,702 RGD:12050105
RGD:13792537
G Lrrc7 leucine rich repeat containing 7 JBrowse link 2 264,910,594 265,300,860 RGD:13792537
G Nsg1 neuronal vesicle trafficking associated 1 JBrowse link 14 77,380,264 77,402,007 RGD:1624291
RGD:1600115
G Rab11a RAB11a, member RAS oncogene family JBrowse link 8 70,192,975 70,215,719 RGD:2306457
RGD:13792537
G Rab8a RAB8A, member RAS oncogene family JBrowse link 16 19,355,047 19,376,776 RGD:2306457
G Scrib scribble planar cell polarity protein JBrowse link 7 117,105,810 117,128,802 RGD:12050130
RGD:13792537
G Vps35 VPS35 retromer complex component JBrowse link 19 27,464,937 27,500,636 RGD:1600115
RGD:1624291
positive regulation of protein localization to synapse term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clstn3 calsyntenin 3 JBrowse link 4 157,044,736 157,078,013 RGD:1624291
RGD:1600115
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:1600115
RGD:1624291
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:8553420
G Nlgn2 neuroligin 2 JBrowse link 10 56,431,586 56,444,847 RGD:8553420
RGD:1600115
RGD:1624291
G Nlgn3 neuroligin 3 JBrowse link X 71,199,390 71,227,460 RGD:8553420
positive regulation of receptor localization to synapse term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dbn1 drebrin 1 JBrowse link 17 9,679,511 9,693,878 RGD:1600115
RGD:1624291
G Stx7 syntaxin 7 JBrowse link 1 22,241,655 22,281,850 RGD:1624291
G Tyrobp Tyro protein tyrosine kinase binding protein JBrowse link 1 88,875,370 88,879,305 RGD:1624291
postsynaptic neurotransmitter receptor diffusion trapping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacng2 calcium voltage-gated channel auxiliary subunit gamma 2 JBrowse link 7 119,228,112 119,353,332 RGD:1624291
RGD:13792537
G Cacng3 calcium voltage-gated channel auxiliary subunit gamma 3 JBrowse link 1 192,613,766 192,708,371 RGD:13792537
G Cacng4 calcium voltage-gated channel auxiliary subunit gamma 4 JBrowse link 10 95,954,160 96,015,484 RGD:13792537
G Cacng5 calcium voltage-gated channel auxiliary subunit gamma 5 JBrowse link 10 96,122,240 96,166,606 RGD:13792537
G Cacng7 calcium voltage-gated channel auxiliary subunit gamma 7 JBrowse link 1 64,374,547 64,405,380 RGD:13792537
G Cacng8 calcium voltage-gated channel auxiliary subunit gamma 8 JBrowse link 1 64,330,106 64,350,338 RGD:13792537
G Camk2a calcium/calmodulin-dependent protein kinase II alpha JBrowse link 18 56,193,978 56,295,869 RGD:12050118
G Dlg4 discs large MAGUK scaffold protein 4 JBrowse link 10 56,625,845 56,655,543 RGD:12050129
RGD:13792537
G Gphn gephyrin JBrowse link 6 101,327,874 101,859,169 RGD:1624291
RGD:13792537
G Shisa6 shisa family member 6 JBrowse link 10 52,744,069 53,037,853 RGD:1600115
RGD:1624291
protein localization to postsynaptic membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 JBrowse link 3 2,507,745 2,534,664 RGD:1624291
RGD:1600115
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A JBrowse link 10 5,707,806 6,123,568 RGD:1624291
RGD:1600115
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C JBrowse link 10 103,798,290 103,816,923 RGD:1624291
RGD:1600115
receptor localization to synapse term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anks1b ankyrin repeat and sterile alpha motif domain containing 1B JBrowse link 7 30,507,135 31,684,604 RGD:10402037
G Cep112 centrosomal protein 112 JBrowse link 10 96,660,294 97,146,426 RGD:8553984
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link 11 72,164,566 72,378,895 RGD:13792537
G Dlg2 discs large MAGUK scaffold protein 2 JBrowse link 1 154,916,274 157,274,077 RGD:13792537
G Dlg3 discs large MAGUK scaffold protein 3 JBrowse link X 70,596,246 70,648,529 RGD:13792537
G Dlg4 discs large MAGUK scaffold protein 4 JBrowse link 10 56,625,845 56,655,543 RGD:8554095
RGD:13792537
G Erbin erbb2 interacting protein JBrowse link 2 33,880,860 33,952,806 RGD:13792537
G Lrrc7 leucine rich repeat containing 7 JBrowse link 2 264,910,594 265,300,860 RGD:13792537
G Neto1 neuropilin and tolloid like 1 JBrowse link 18 83,471,342 83,585,043 RGD:1624291
RGD:1600115
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:1624291
RGD:1600115
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:1624291
RGD:1600115
G Reln reelin JBrowse link 4 9,347,533 9,774,257 RGD:1624291
RGD:1600115
G Scrib scribble planar cell polarity protein JBrowse link 7 117,105,810 117,128,802 RGD:13792537
G Synj2bp synaptojanin 2 binding protein JBrowse link 6 105,224,166 105,261,549 RGD:13792537
regulation of neurotransmitter receptor localization to postsynaptic specialization membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam10 ADAM metallopeptidase domain 10 JBrowse link 8 77,107,355 77,237,483 RGD:1624291
RGD:1600115
G Camk2a calcium/calmodulin-dependent protein kinase II alpha JBrowse link 18 56,193,978 56,295,869 RGD:13702166
G Dag1 dystroglycan 1 JBrowse link 8 116,980,501 116,993,182 RGD:1600115
RGD:1624291
G Ghsr growth hormone secretagogue receptor JBrowse link 2 113,065,953 113,071,265 RGD:13702206
G Gpc4 glypican 4 JBrowse link X 139,354,325 139,464,876 RGD:13702461
RGD:13792537
G Gpc6 glypican 6 JBrowse link 15 102,164,091 103,174,721 RGD:13702461
RGD:13792537
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:13702314
G Hras HRas proto-oncogene, GTPase JBrowse link 1 214,178,404 214,181,841 RGD:1600115
RGD:1624291
G Iqsec2 IQ motif and Sec7 domain 2 JBrowse link X 22,212,137 22,293,810 RGD:1624291
RGD:1600115
G Kalrn kalirin, RhoGEF kinase JBrowse link 11 69,484,293 70,025,682 RGD:12050112
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 JBrowse link 4 10,995,241 12,472,423 RGD:13702450
G Map2k1 mitogen activated protein kinase kinase 1 JBrowse link 8 69,134,218 69,722,573 RGD:13702166
G Prkcz protein kinase C, zeta JBrowse link 5 172,658,071 172,769,492 RGD:13702194
G Rap1a RAP1A, member of RAS oncogene family JBrowse link 2 208,193,950 208,215,186 RGD:1600115
RGD:1624291
G Rapgef4 Rap guanine nucleotide exchange factor 4 JBrowse link 3 58,632,338 58,925,127 RGD:2314692
G Tnik TRAF2 and NCK interacting kinase JBrowse link 2 113,984,599 114,391,805 RGD:1624291
regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arhgap44 Rho GTPase activating protein 44 JBrowse link 10 51,501,547 51,669,546 RGD:1600115
RGD:1624291
G Grasp general receptor for phosphoinositides 1 associated scaffold protein JBrowse link 7 142,869,785 142,877,551 RGD:1600115
RGD:1624291
G Gripap1 GRIP1 associated protein 1 JBrowse link X 15,523,929 15,553,702 RGD:12050105
RGD:13792537
regulation of protein localization to synapse term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abhd17b abhydrolase domain containing 17B JBrowse link 1 239,266,140 239,301,133 RGD:1624291
RGD:1600115
regulation of receptor localization to synapse term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nptn neuroplastin JBrowse link 8 63,379,062 63,445,694 RGD:1624291
regulation of synaptic plasticity by receptor localization to synapse term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anks1b ankyrin repeat and sterile alpha motif domain containing 1B JBrowse link 7 30,507,135 31,684,604 RGD:1624291
RGD:1600115

Term paths to the root
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Term Annotations click to browse term
  biological_process 17926
    localization 5991
      macromolecule localization 2929
        protein localization 2594
          protein localization to synapse 101
            anterograde dendritic transport of messenger ribonucleoprotein complex 2
            gephyrin clustering involved in postsynaptic density assembly 3
            positive regulation of protein localization to synapse + 8
            protein localization to postsynaptic membrane + 60
            protein localization to presynapse + 9
            receptor localization to synapse + 71
            regulation of protein localization to synapse + 30
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.