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ONTOLOGY REPORT - ANNOTATIONS


Term:vesicle cargo loading
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Accession:GO:0035459 term browser browse the term
Definition:The formation of a macromolecular complex between the coat proteins and proteins and/or lipoproteins that are going to be transported by a vesicle.
Synonyms:exact_synonym: cargo loading into vesicle;   cargo selection


show annotations for term's descendants           Sort by:
 
vesicle cargo loading term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07064415.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:80,188,943...80,201,550 JBrowse link
G Kif13a kinesin family member 13A ISO (PMID:19841138) RGD PMID:19841138 NCBI chr17:18,151,582...18,335,027
Ensembl chr17:18,151,982...18,335,019
JBrowse link
G Mia2 MIA SH3 domain ER export factor 2 ISO
IBA
(PMID:27138255), (PMID:27170179)
PMID:21873635
RGD PMID:27138255, PMID:27170179, PMID:21873635 RGD:13792537 NCBI chr 6:80,188,721...80,286,918
Ensembl chr 6:80,218,880...80,286,546
JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:101,727,434...101,770,127
Ensembl chr13:101,727,935...101,761,541
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO
ISS
IEA
(PMID:24577224)
GO_REF:0000024
GO_REF:0000107
(MGI:MGI:5432454|PMID:22539346)
RGD
Alzheimers_University_of_Toronto
Ensembl
PMID:22539346, PMID:24577224 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5432454 NCBI chr 1:154,377,229...154,458,966
Ensembl chr 1:154,377,247...154,458,425
JBrowse link
COPII-coated vesicle cargo loading term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mia3 MIA SH3 domain ER export factor 3 ISO (PMID:27138255) RGD PMID:27138255 NCBI chr13:101,727,434...101,770,127
Ensembl chr13:101,727,935...101,761,541
JBrowse link
G Rab1a RAB1A, member RAS oncogene family ISO (PMID:17684057) RGD PMID:17684057 NCBI chr14:104,475,082...104,500,176
Ensembl chr14:104,475,082...104,501,020
JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A ISO (PMID:17499046), (PMID:18843296) RGD PMID:17499046, PMID:18843296 NCBI chr20:31,298,269...31,310,676
Ensembl chr20:31,265,483...31,310,674
JBrowse link
G Scap SREBF chaperone ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:118,551,869...118,628,650
Ensembl chr 8:118,570,503...118,628,651
JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component ISO (PMID:17499046), (PMID:18843296) RGD PMID:17499046, PMID:18843296 NCBI chr 4:145,686,186...145,699,577
Ensembl chr 4:145,686,193...145,699,577
JBrowse link
G Sec23a Sec23 homolog A, COPII coat complex component ISO
IBA
UniProtKB:P15303 (PMID:17499046), (PMID:18843296), (PMID:8898360)
PMID:21873635
RGD PMID:8898360, PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr 6:80,059,742...80,107,340
Ensembl chr 6:80,060,916...80,107,236
JBrowse link
G Sec23b Sec23 homolog B, COPII coat complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:138,715,118...138,757,111
Ensembl chr 3:138,715,570...138,757,111
JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr10:37,138,539...37,215,899
Ensembl chr10:37,139,806...37,215,899
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr15:4,035,196...4,057,209
Ensembl chr15:4,035,196...4,057,157
JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr 2:227,455,704...227,562,801
Ensembl chr 2:227,455,722...227,562,319
JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:17499046), (PMID:18843296)
Ensembl
RGD
PMID:17499046, PMID:18843296, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr14:10,854,713...10,909,579
Ensembl chr14:10,854,682...10,909,612
JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:264,266,279...264,294,687
Ensembl chr 1:264,268,338...264,294,630
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 ISO (PMID:17684057) RGD PMID:17684057 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158
JBrowse link
negative regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Insig1 insulin induced gene 1 ISO (PMID:15899885) RGD PMID:15899885 NCBI chr 4:342,302...350,515
Ensembl chr 4:342,302...350,515
JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A ISO (MGI:MGI:5496780|PMID:23580231) RGD PMID:23580231 MGI:MGI:5496780 NCBI chr20:31,298,269...31,310,676
Ensembl chr20:31,265,483...31,310,674
JBrowse link
regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sar1a secretion associated, Ras related GTPase 1A ISO (MGI:MGI:4438817|PMID:19966784) RGD PMID:19966784 MGI:MGI:4438817 NCBI chr20:31,298,269...31,310,676
Ensembl chr20:31,265,483...31,310,674
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO MGI:MGI:4440619|MGI:MGI:4440621 (MGI:MGI:4438817|PMID:19966784) RGD PMID:19966784 MGI:MGI:4438817 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    cellular process 18788
      vesicle-mediated transport 1652
        vesicle cargo loading 19
          COPII-coated vesicle cargo loading + 15
          clathrin-coated vesicle cargo loading + 0
Path 2
Term Annotations click to browse term
  biological_process 20014
    localization 6486
      establishment of localization 4918
        transport 4774
          vesicle-mediated transport 1652
            vesicle cargo loading 19
              COPII-coated vesicle cargo loading + 15
              clathrin-coated vesicle cargo loading + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.