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ONTOLOGY REPORT - ANNOTATIONS


Term:histone H2A monoubiquitination
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Accession:GO:0035518 term browser browse the term
Definition:The modification of histone H2A by addition of a single ubiquitin group.


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histone H2A monoubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcor BCL6 co-repressor ISO (PMID:16943429) RGD PMID:16943429 NCBI chr  X:11,570,155...11,692,022
Ensembl chr  X:11,648,989...11,691,099
JBrowse link
G Cul4b cullin 4B ISO (PMID:22334663) RGD PMID:22334663 NCBI chr  X:124,831,391...124,870,329
Ensembl chr  X:124,832,628...124,870,329
JBrowse link
G Ddb1 damage-specific DNA binding protein 1 IEA
ISO
GO_REF:0000107
(PMID:22334663)
Ensembl
RGD
PMID:22334663 GO_REF:0000107 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347
JBrowse link
G Ddb2 damage specific DNA binding protein 2 ISO (PMID:22334663) RGD PMID:22334663 NCBI chr 3:80,030,437...80,052,984
Ensembl chr 3:80,030,437...80,052,953
JBrowse link
G Kdm2b lysine demethylase 2B ISO (PMID:16943429) RGD PMID:16943429 NCBI chr12:39,021,924...39,161,954
Ensembl chr12:39,078,119...39,161,956
JBrowse link
G Pcgf1 polycomb group ring finger 1 ISO (PMID:16943429) RGD PMID:16943429 NCBI chr 4:113,911,129...113,913,718
Ensembl chr 4:113,910,685...113,913,687
JBrowse link
G Ring1 ring finger protein 1 ISO
IEA
IBA
(PMID:16943429)
GO_REF:0000002
PMID:21873635
RGD
InterPro
PMID:16943429, PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr20:3,812,287...3,815,834
Ensembl chr20:3,812,287...3,815,834
JBrowse link
G Rnf168 ring finger protein 168 ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:22980979), (PMID:23760478)
UniProt
Ensembl
RGD
PMID:22980979, PMID:23760478 GO_REF:0000024, GO_REF:0000107 NCBI chr11:71,721,242...71,743,421
Ensembl chr11:71,721,250...71,743,421
JBrowse link
G Rnf2 ring finger protein 2 ISO
IBA
(PMID:16943429)
PMID:21873635
RGD PMID:16943429, PMID:21873635 RGD:13792537 NCBI chr13:68,829,714...68,859,920
Ensembl chr13:68,830,620...68,858,809
JBrowse link
G Rybp RING1 and YY1 binding protein ISO (PMID:16943429) RGD PMID:16943429 NCBI chr 4:132,689,623...132,740,823
Ensembl chr 4:132,689,531...132,740,938
JBrowse link
G Skp1 S-phase kinase-associated protein 1 ISO
IEA
(PMID:16943429)
GO_REF:0000107
RGD
Ensembl
PMID:16943429 GO_REF:0000107 NCBI chr10:37,594,578...37,609,498
Ensembl chr10:37,594,578...37,609,498
JBrowse link
G Trim37 tripartite motif-containing 37 ISO (PMID:25470042)
(MGI:MGI:5613824|PMID:25470042)
RGD PMID:25470042 MGI:MGI:5613824 NCBI chr10:74,436,165...74,568,636
Ensembl chr10:74,436,208...74,568,493
JBrowse link
histone H2A-K119 monoubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmi1 BMI1 proto-oncogene, polycomb ring finger ISO
IBA
(PMID:26151332)
PMID:21873635
RGD PMID:26151332, PMID:21873635 RGD:13792537 NCBI chr17:85,360,439...85,370,283
Ensembl chr17:85,364,483...85,368,208
JBrowse link
G LOC103692167 polycomb group RING finger protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:114,776,680...114,779,447
Ensembl chr 4:114,776,797...114,779,446
JBrowse link
G Pcgf1 polycomb group ring finger 1 ISO
IBA
ISS
(PMID:26151332)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:26151332, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 4:113,911,129...113,913,718
Ensembl chr 4:113,910,685...113,913,687
JBrowse link
G Pcgf2 polycomb group ring finger 2 ISO
IBA
(PMID:26151332)
PMID:21873635
RGD PMID:26151332, PMID:21873635 RGD:13792537 NCBI chr10:85,631,829...85,642,591
Ensembl chr10:85,632,819...85,636,902
JBrowse link
G Pcgf3 polycomb group ring finger 3 ISO
IBA
(MGI:MGI:5908473|PMID:28596365)
PMID:21873635
RGD PMID:28596365, PMID:21873635 MGI:MGI:5908473, RGD:13792537 NCBI chr14:2,247,805...2,297,155
Ensembl chr14:2,247,808...2,297,155
JBrowse link
G Pcgf5 polycomb group ring finger 5 ISO
IBA
(MGI:MGI:5908473|PMID:28596365)
PMID:21873635
RGD PMID:28596365, PMID:21873635 MGI:MGI:5908473, RGD:13792537 NCBI chr 1:254,974,688...255,090,925
Ensembl chr 1:254,974,789...255,086,207
JBrowse link
G Pcgf6 polycomb group ring finger 6 ISO
IBA
ISS
(PMID:26151332)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:26151332, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:266,811,418...266,831,022
Ensembl chr 1:266,811,420...266,830,976
JBrowse link
G RGD1562871 similar to BMI1-like protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:79,546,624...79,547,767
Ensembl chr  X:79,546,624...79,547,767
JBrowse link
G Rnf2 ring finger protein 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5527017|PMID:24034696)
Ensembl
UniProt
RGD
PMID:24034696 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5527017 NCBI chr13:68,829,714...68,859,920
Ensembl chr13:68,830,620...68,858,809
JBrowse link
G Scml2 Scm polycomb group protein like 2 ISO (MGI:MGI:5645866|PMID:25634095) RGD PMID:25634095 MGI:MGI:5645866 NCBI chr  X:35,305,235...35,431,271
Ensembl chr  X:35,305,236...35,431,164
JBrowse link
G Trim37 tripartite motif-containing 37 ISO
IBA
(PMID:25470042)
PMID:21873635
(MGI:MGI:5613824|PMID:25470042)
RGD PMID:25470042, PMID:21873635 MGI:MGI:5613824, RGD:13792537 NCBI chr10:74,436,165...74,568,636
Ensembl chr10:74,436,208...74,568,493
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      primary metabolic process 10920
        protein metabolic process 6228
          protein modification process 3950
            cellular protein modification process 3950
              histone modification 499
                histone ubiquitination 52
                  histone monoubiquitination 32
                    histone H2A monoubiquitination 20
                      histone H2A-K119 monoubiquitination 11
Path 2
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      organic substance metabolic process 11651
        macromolecule metabolic process 10086
          protein metabolic process 6228
            protein modification process 3950
              cellular protein modification process 3950
                protein modification by small protein conjugation or removal 952
                  protein modification by small protein conjugation 816
                    protein ubiquitination 767
                      histone ubiquitination 52
                        histone monoubiquitination 32
                          histone H2A monoubiquitination 20
                            histone H2A-K119 monoubiquitination 11
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.