ONTOLOGY REPORT - ANNOTATIONS


Term:intraciliary retrograde transport
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Accession:GO:0035721 term browser browse the term
Definition:The directed movement of large protein complexes along microtubules from the tip of a cilium (also called flagellum) toward the cell body, mediated by motor proteins.
Comment:Note that we deem cilium and microtubule-based flagellum to be equivalent.
Synonyms:exact_synonym: intraflagellar retrograde transport


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intraciliary retrograde transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 JBrowse link 8 5,217,054 5,436,969 RGD:1624291
RGD:13792537
RGD:1600115
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 JBrowse link 6 7,900,962 7,933,795 RGD:13792537
G Dynll1 dynein light chain LC8-type 1 JBrowse link 12 47,074,200 47,076,573 RGD:1624291
G Ick intestinal cell kinase JBrowse link 8 85,413,998 85,473,374 RGD:1600115
RGD:1624291
G Ift122 intraflagellar transport 122 JBrowse link 4 147,756,574 147,826,983 RGD:1624291
RGD:13792537
G Ift140 intraflagellar transport 140 JBrowse link 10 14,373,668 14,461,509 RGD:1624291
RGD:13792537
G Ift43 intraflagellar transport 43 JBrowse link 6 109,939,323 110,016,646 RGD:1624291
RGD:1600115
G Ttc21a tetratricopeptide repeat domain 21A JBrowse link 8 128,622,414 128,657,199 RGD:13792537
G Ttc21b tetratricopeptide repeat domain 21B JBrowse link 3 52,286,794 52,361,060 RGD:1624291
RGD:13792537
G Wdr19 WD repeat domain 19 JBrowse link 14 44,705,012 44,767,120 RGD:1624291
RGD:13792537
G Wdr35 WD repeat domain 35 JBrowse link 6 34,094,291 34,152,048 RGD:1624291
RGD:13792537
regulation of intraciliary retrograde transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tctex1d2 Tctex1 domain containing 2 JBrowse link 11 71,593,302 71,601,662 RGD:1624291
G Ttc21b tetratricopeptide repeat domain 21B JBrowse link 3 52,286,794 52,361,060 RGD:1600115
RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17926
    localization 5991
      macromolecule localization 2929
        protein localization 2594
          protein-containing complex localization 246
            intraciliary transport 40
              intraciliary retrograde transport 12
                negative regulation of intraciliary retrograde transport 0
                positive regulation of intraciliary retrograde transport 0
                regulation of intraciliary retrograde transport + 2
Path 2
Term Annotations click to browse term
  biological_process 17926
    localization 5991
      establishment of localization 4600
        transport 4460
          nitrogen compound transport 2158
            amide transport 1838
              peptide transport 1807
                protein transport 1753
                  intracellular protein transport 936
                    protein transport along microtubule 59
                      intraciliary transport 40
                        intraciliary retrograde transport 12
                          negative regulation of intraciliary retrograde transport 0
                          positive regulation of intraciliary retrograde transport 0
                          regulation of intraciliary retrograde transport + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.