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ONTOLOGY REPORT - ANNOTATIONS


Term:endothelial cell chemotaxis
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Accession:GO:0035767 term browser browse the term
Definition:The directed movement of an endothelial cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).


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endothelial cell chemotaxis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn3 cellular communication network factor 3 ISO
ISS
(PMID:12695522)
GO_REF:0000024
RGD
UniProt
PMID:12695522 GO_REF:0000024 NCBI chr 7:94,375,134...94,382,154
Ensembl chr 7:94,375,020...94,383,024
JBrowse link
G Coro1b coronin 1B ISO
IEA
(PMID:23667561)
GO_REF:0000107
RGD
Ensembl
PMID:23667561 GO_REF:0000107 NCBI chr 1:219,397,827...219,403,253
Ensembl chr 1:219,397,850...219,403,260
JBrowse link
G Egr3 early growth response 3 ISO (PMID:18059339) RGD PMID:18059339 NCBI chr15:51,756,683...51,762,080
Ensembl chr15:51,756,736...51,760,722
JBrowse link
G Hmgb1 high mobility group box 1 ISO (MGI:3760906|PMID:16365390) RGD PMID:16365390 MGI:3760906 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 ISO (PMID:18059339) RGD PMID:18059339 NCBI chr 7:142,899,358...142,920,216
Ensembl chr 7:142,905,758...142,920,216
JBrowse link
G Nrp1 neuropilin 1 ISO (PMID:21245381) RGD PMID:21245381 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Plekhg5 pleckstrin homology and RhoGEF domain containing G5 IEA
ISO
ISS
GO_REF:0000107
(MGI:5508725|PMID:21543326)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21543326 GO_REF:0000024, GO_REF:0000107, MGI:5508725 NCBI chr 5:169,244,778...169,288,310
Ensembl chr 5:169,244,778...169,288,309
JBrowse link
G Rab13 RAB13, member RAS oncogene family ISS
ISO
GO_REF:0000024
(MGI:5508725|PMID:21543326)
UniProt
RGD
PMID:21543326 GO_REF:0000024, MGI:5508725 NCBI chr 2:189,581,209...189,586,358
Ensembl chr 2:189,581,644...189,586,338
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (PMID:18440775) RGD PMID:18440775 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
endothelial cell chemotaxis to fibroblast growth factor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcl13 C-X-C motif chemokine ligand 13 ISO (PMID:11708770) RGD PMID:11708770 NCBI chr14:15,253,146...15,258,221
Ensembl chr14:15,253,125...15,258,207
JBrowse link
negative regulation of endothelial cell chemotaxis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrg histidine-rich glycoprotein IEA
ISO
ISS
GO_REF:0000107
(PMID:14744774), (PMID:16436387), (PMID:16489009)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:14744774, PMID:16436387, PMID:16489009 GO_REF:0000024, GO_REF:0000107 NCBI chr11:81,621,274...81,639,938
Ensembl chr11:81,621,283...81,639,952
JBrowse link
G LOC681544 similar to histidine-rich glycoprotein ISS GO_REF:0000024 UniProt GO_REF:0000024 Ensembl chr11:81,621,283...81,639,952 JBrowse link
G Notch1 notch receptor 1 ISO
ISS
(PMID:20616313)
GO_REF:0000024
RGD
UniProt
PMID:20616313 GO_REF:0000024 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Thbs1 thrombospondin 1 ISO (PMID:16150726) RGD PMID:16150726 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466
JBrowse link
negative regulation of endothelial cell chemotaxis to fibroblast growth factor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcl13 C-X-C motif chemokine ligand 13 ISO (PMID:11708770) RGD PMID:11708770 NCBI chr14:15,253,146...15,258,221
Ensembl chr14:15,253,125...15,258,207
JBrowse link
positive regulation of endothelial cell chemotaxis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf2 fibroblast growth factor 2 ISO UniProtKB:Q9H3U7 (PMID:16774925) RGD PMID:16774925 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Hspb1 heat shock protein family B (small) member 1 ISO (PMID:18440775) RGD PMID:18440775 NCBI chr12:23,839,390...23,841,051
Ensembl chr12:23,839,399...23,841,049
JBrowse link
G Lgmn legumain IEA
ISO
GO_REF:0000107
(PMID:18377911)
Ensembl
RGD
PMID:18377911 GO_REF:0000107 NCBI chr 6:126,282,246...126,308,207
Ensembl chr 6:126,282,233...126,320,726
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19850054)
Ensembl
UniProt
RGD
PMID:19850054 GO_REF:0000024, GO_REF:0000107 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
G P2rx4 purinergic receptor P2X 4 ISO (PMID:21106936) RGD PMID:21106936 NCBI chr12:39,308,022...39,325,673
Ensembl chr12:39,308,025...39,325,673
JBrowse link
G Prkd1 protein kinase D1 ISO (PMID:18440775) RGD PMID:18440775 NCBI chr 6:71,035,017...71,349,531
Ensembl chr 6:71,035,332...71,349,249
JBrowse link
G Prkd2 protein kinase D2 ISO (PMID:18440775) RGD PMID:18440775 NCBI chr 1:78,767,911...78,796,223
Ensembl chr 1:78,767,911...78,796,231
JBrowse link
G Sema5a semaphorin 5A ISS
ISO
GO_REF:0000024
(MGI:5526935|PMID:19850054)
UniProt
RGD
PMID:19850054 GO_REF:0000024, MGI:5526935 NCBI chr 2:85,377,318...85,808,970
Ensembl chr 2:85,377,318...85,808,970
JBrowse link
G Shh sonic hedgehog signaling molecule IDA RGD PMID:20052412 RGD:12879408 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 ISO UniProtKB:P09038 (PMID:16774925) RGD PMID:16774925 NCBI chr 1:56,242,289...56,374,106
Ensembl chr 1:56,242,346...56,374,120
JBrowse link
G Tmsb4x thymosin beta 4, X-linked ISO (PMID:21106936) RGD PMID:21106936 NCBI chr  X:28,593,405...28,617,267
Ensembl chr  X:28,593,405...28,595,395
JBrowse link
positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspb1 heat shock protein family B (small) member 1 ISO
IEA
(PMID:18440775)
GO_REF:0000107
RGD
Ensembl
PMID:18440775 GO_REF:0000107 NCBI chr12:23,839,390...23,841,051
Ensembl chr12:23,839,399...23,841,049
JBrowse link
G Kdr kinase insert domain receptor ISO
IEA
(PMID:21885851)
GO_REF:0000107
RGD
Ensembl
PMID:21885851 GO_REF:0000107 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
JBrowse link
G Prkd1 protein kinase D1 ISO UniProtKB:Q9BZL6 (PMID:18440775), (PMID:20497126) RGD PMID:18440775, PMID:20497126 NCBI chr 6:71,035,017...71,349,531
Ensembl chr 6:71,035,332...71,349,249
JBrowse link
G Prkd2 protein kinase D2 ISO UniProtKB:Q15139 (PMID:18440775), (PMID:20497126) RGD PMID:18440775, PMID:20497126 NCBI chr 1:78,767,911...78,796,223
Ensembl chr 1:78,767,911...78,796,231
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (PMID:18440775), (PMID:20497126), (PMID:21245381) RGD PMID:18440775, PMID:20497126, PMID:21245381 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
positive regulation of endothelial cell chemotaxis to fibroblast growth factor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf16 fibroblast growth factor 16 ISO
IBA
(PMID:16756958)
PMID:21873635
RGD PMID:16756958, PMID:21873635 RGD:13792537 NCBI chr  X:76,786,728...76,796,311
Ensembl chr  X:76,786,466...76,797,069
JBrowse link
G Fgf18 fibroblast growth factor 18 ISO
IEA
(PMID:16756958)
GO_REF:0000107
RGD
Ensembl
PMID:16756958 GO_REF:0000107 NCBI chr10:18,047,109...18,082,290
Ensembl chr10:18,047,109...18,063,391
JBrowse link
G Fgf2 fibroblast growth factor 2 ISO (PMID:16756958) RGD PMID:16756958 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 ISO
IEA
(PMID:21885851)
GO_REF:0000107
RGD
Ensembl
PMID:21885851 GO_REF:0000107 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
regulation of endothelial cell chemotaxis to fibroblast growth factor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf1 fibroblast growth factor 1 ISO (PMID:16756958) RGD PMID:16756958 NCBI chr18:32,273,830...32,359,831
Ensembl chr18:32,273,770...32,359,824
JBrowse link
G Fgf2 fibroblast growth factor 2 ISO (PMID:16756958) RGD PMID:16756958 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Fgf4 fibroblast growth factor 4 ISO (PMID:16756958) RGD PMID:16756958 NCBI chr 1:218,024,537...218,029,539
Ensembl chr 1:218,025,810...218,027,220
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    locomotion 1952
      taxis 640
        chemotaxis 635
          cell chemotaxis 333
            endothelial cell chemotaxis 31
              endothelial cell chemotaxis to fibroblast growth factor + 7
              negative regulation of endothelial cell chemotaxis + 5
              positive regulation of endothelial cell chemotaxis + 16
              regulation of endothelial cell chemotaxis + 23
Path 2
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      localization of cell 1760
        cell motility 1760
          cell migration 1583
            ameboidal-type cell migration 452
              epithelial cell migration 312
                endothelial cell migration 223
                  endothelial cell chemotaxis 31
                    endothelial cell chemotaxis to fibroblast growth factor + 7
                    negative regulation of endothelial cell chemotaxis + 5
                    positive regulation of endothelial cell chemotaxis + 16
                    regulation of endothelial cell chemotaxis + 23
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.