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ONTOLOGY REPORT - ANNOTATIONS


Term:modulation of process of other organism
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Accession:GO:0035821 term browser browse the term
Definition:The process in which an organism effects a change in the structure or processes of another organism.
Synonyms:exact_synonym: modification of morphology or physiology of other organism
 narrow_synonym: regulation of morphology of other organism;   regulation of physiological process of other organism;   regulation of physiology of other organism
 related_synonym: regulation of morphology or physiology of other organism


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modulation of process of other organism term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atn1 atrophin 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:157,267,394...157,281,199
Ensembl chr 4:157,267,901...157,274,755
Ensembl chr 9:157,267,901...157,274,755
JBrowse link
G Camp cathelicidin antimicrobial peptide ISO (PMID:23537644) RGD PMID:23537644 NCBI chr 8:117,930,557...117,932,371
Ensembl chr 8:117,930,546...117,932,518
JBrowse link
G Galp galanin-like peptide ISO (PMID:23537644) RGD PMID:23537644 NCBI chr 1:71,352,417...71,374,457
Ensembl chr 1:71,352,419...71,373,605
JBrowse link
G Pomc proopiomelanocortin ISO (PMID:10670585) RGD PMID:10670585 NCBI chr 6:28,382,937...28,388,771
Ensembl chr 6:28,382,962...28,388,967
JBrowse link
G S100a9 S100 calcium binding protein A9 IEA
ISO
GO_REF:0000107
(PMID:12874352)
Ensembl
RGD
PMID:12874352 GO_REF:0000107 NCBI chr 2:190,097,436...190,100,209
Ensembl chr 2:190,097,554...190,100,276
JBrowse link
G Slpi secretory leukocyte peptidase inhibitor ISO (PMID:2467900) RGD PMID:2467900 NCBI chr 3:160,799,979...160,802,228
Ensembl chr 3:160,799,981...160,802,433
JBrowse link
catabolism by host of symbiont cell wall chitin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chia chitinase, acidic IEA
ISO
GO_REF:0000107
(MGI:1931335|PMID:11085997)
Ensembl
RGD
PMID:11085997 GO_REF:0000107, MGI:1931335 NCBI chr 2:208,750,348...208,797,388
Ensembl chr 2:208,749,996...208,797,402
JBrowse link
catabolism by host of symbiont protein term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:26812398) RGD PMID:26812398 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
cell wall disruption in other organism term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC115202.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:109,473,143...109,475,567 JBrowse link
G Reg1a regenerating family member 1 alpha IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:109,497,962...109,500,626
Ensembl chr 4:109,497,962...109,501,082
JBrowse link
G Reg3a regenerating islet-derived 3 alpha IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:109,477,893...109,480,659
Ensembl chr 4:109,477,920...109,480,659
JBrowse link
G Reg3b regenerating family member 3 beta IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:109,467,272...109,470,510
Ensembl chr 4:109,467,272...109,470,510
JBrowse link
G Reg3g regenerating family member 3 gamma ISO
IBA
(PMID:16931762)
(MGI:5897756|PMID:16931762)
PMID:21873635
RGD PMID:16931762, PMID:21873635 MGI:5897756, RGD:13792537 NCBI chr 4:109,529,679...109,532,234
Ensembl chr 4:109,529,679...109,532,234
JBrowse link
host-mediated regulation of intestinal microbiota composition term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrc19 leucine rich repeat containing 19 ISO (MGI:6204559|PMID:26776522) RGD PMID:26776522 MGI:6204559 NCBI chr 5:113,614,164...113,626,834
Ensembl chr 5:113,615,943...113,621,134
JBrowse link
G Napepld N-acyl phosphatidylethanolamine phospholipase D ISS
ISO
GO_REF:0000024
(MGI:5641800|PMID:25757720)
UniProt
RGD
PMID:25757720 GO_REF:0000024, MGI:5641800 NCBI chr 4:9,965,323...10,004,650
Ensembl chr 4:9,966,891...10,002,247
JBrowse link
induction by virus of host autophagy term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (MGI:5544501|PMID:24310610) RGD PMID:24310610 MGI:5544501 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217
JBrowse link
G Phb2 prohibitin 2 ISO (PMID:32276428) RGD PMID:32276428 NCBI chr 4:157,230,769...157,235,375
Ensembl chr 4:157,230,769...157,235,367
JBrowse link
induction by virus of host cell-cell fusion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd4 Cd4 molecule ISO (PMID:9166430) RGD PMID:9166430 NCBI chr 4:157,381,862...157,408,357
Ensembl chr 4:157,383,052...157,408,176
JBrowse link
maintenance of symbiont-containing vacuole by host term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 ISO
ISS
(PMID:18665841)
(MGI:4457239|PMID:18665841)
GO_REF:0000024
RGD
UniProt
PMID:18665841 GO_REF:0000024, MGI:4457239 NCBI chr 4:85,551,503...85,563,683
Ensembl chr 4:85,551,502...85,569,360
JBrowse link
membrane disruption in other organism term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Defa10 defensin alpha 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,498,236...75,499,012
Ensembl chr16:75,498,236...75,499,012
JBrowse link
G Defa11 defensin alpha 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,517,421...75,519,605
Ensembl chr16:75,517,505...75,518,336
JBrowse link
G Defa24 defensin alpha 24 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,345,086...75,346,122
Ensembl chr16:75,345,086...75,346,122
JBrowse link
G Defa5 defensin alpha 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,338,050...75,340,401
Ensembl chr16:75,338,052...75,340,360
JBrowse link
G Defa6 defensin alpha 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,400,781...75,401,655
Ensembl chr16:75,400,781...75,401,655
JBrowse link
G Defa8 defensin alpha 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,428,675...75,429,568
Ensembl chr16:75,428,675...75,429,568
JBrowse link
G Defa9 defensin alpha 9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,465,710...75,466,604
Ensembl chr16:75,465,710...75,466,606
JBrowse link
G Defal1 defensin alpha-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,366,925...75,367,985
Ensembl chr16:75,366,929...75,367,906
JBrowse link
G Defb21 defensin beta 21 ISO (PMID:15033915) RGD PMID:15033915 NCBI chr 3:148,047,638...148,048,952
Ensembl chr 3:148,047,638...148,048,952
JBrowse link
G Ltf lactotransferrin ISO (PMID:15155221), (PMID:9596699) RGD PMID:9596699, PMID:15155221 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
G Np4 defensin NP-4 precursor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,478,548...75,481,146
Ensembl chr16:75,414,786...75,481,115
JBrowse link
G RatNP-3b defensin RatNP-3 precursor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,528,348...75,530,511
Ensembl chr16:75,497,832...75,530,517
JBrowse link
modulation by host of RNA binding by virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 ISO (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575
JBrowse link
modulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifi27 interferon, alpha-inducible protein 27 ISO (PMID:27777077) RGD PMID:27777077 NCBI chr 6:127,327,959...127,334,430
Ensembl chr 6:127,327,959...127,334,428
JBrowse link
modulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO (MGI:5787727|PMID:26581985) RGD PMID:26581985 MGI:5787727 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179
JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxl2 F-box and leucine-rich repeat protein 2 ISO (PMID:15893726) RGD PMID:15893726 NCBI chr 8:122,240,393...122,290,439
Ensembl chr 8:122,243,016...122,311,431
JBrowse link
G Fmr1 FMRP translational regulator 1 IEA
ISO
GO_REF:0000107
(PMID:24514761)
Ensembl
RGD
PMID:24514761 GO_REF:0000107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Phb prohibitin ISO (MGI:6436975|PMID:29324904) RGD PMID:29324904 MGI:6436975 NCBI chr10:83,476,107...83,488,878
Ensembl chr10:83,476,107...83,488,878
JBrowse link
G Vapb VAMP associated protein B and C ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 ISO UniProtKB:P04608 (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmc3 proteasome 26S subunit, ATPase 3 IEA
ISO
GO_REF:0000107
(PMID:2194290), (PMID:8419915)
Ensembl
RGD
PMID:2194290, PMID:8419915 GO_REF:0000107 NCBI chr 3:79,876,938...79,882,319
Ensembl chr 3:79,876,938...79,882,319
JBrowse link
modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnip1 TNFAIP3 interacting protein 1 ISO
IBA
(PMID:20010814)
PMID:21873635
RGD PMID:20010814, PMID:21873635 RGD:13792537 NCBI chr10:40,255,776...40,303,092
Ensembl chr10:40,255,776...40,296,470
JBrowse link
modulation by virus of host process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dag1 dystroglycan 1 ISO (PMID:16254364) RGD PMID:16254364 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193
JBrowse link
G Rraga Ras-related GTP binding A ISO
ISS
(PMID:8995684)
GO_REF:0000024
RGD
UniProt
PMID:8995684 GO_REF:0000024 NCBI chr 5:104,941,067...104,942,662
Ensembl chr 5:104,941,066...104,942,662
JBrowse link
G Rxra retinoid X receptor alpha IEA
ISO
GO_REF:0000107
(PMID:11915042)
Ensembl
RGD
PMID:11915042 GO_REF:0000107 NCBI chr 3:6,272,560...6,295,354
Ensembl chr 3:6,211,789...6,295,908
JBrowse link
G Tyms thymidylate synthetase IEP RGD PMID:1247599 RGD:2317429 NCBI chr 9:121,918,875...121,931,564
Ensembl chr 9:121,918,947...121,931,564
JBrowse link
G Vapb VAMP associated protein B and C ISO
ISS
(PMID:16227268)
GO_REF:0000024
RGD
UniProt
PMID:16227268 GO_REF:0000024 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
modulation by virus of host transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntrk3 neurotrophic receptor tyrosine kinase 3 IEP RGD PMID:11175319 RGD:2325644 NCBI chr 1:139,890,537...140,262,503
Ensembl chr 1:139,890,560...140,262,503
JBrowse link
negative regulation by host of symbiont molecular function term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:26812398) RGD PMID:26812398 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Rab9a RAB9A, member RAS oncogene family ISO (PMID:18787122) RGD PMID:18787122 NCBI chr  X:29,525,256...29,547,295
Ensembl chr  X:29,525,256...29,547,294
JBrowse link
G Sftpd surfactant protein D IEA
ISO
GO_REF:0000107
(PMID:28228557)
Ensembl
RGD
PMID:28228557 GO_REF:0000107 NCBI chr16:18,753,535...18,766,100
Ensembl chr16:18,745,458...18,766,174
JBrowse link
negative regulation by host of viral exo-alpha-sialidase activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum ISO
IEA
(PMID:23544079)
GO_REF:0000107
RGD
Ensembl
PMID:23544079 GO_REF:0000107 NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575
JBrowse link
G Ptx3 pentraxin 3 ISO (PMID:23544079) RGD PMID:23544079 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl12 chemokine (C-C motif) ligand 12 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:69,476,866...69,478,416
Ensembl chr10:69,476,775...69,478,462
JBrowse link
G Ccnk cyclin K ISO (PMID:21555514) RGD PMID:21555514 NCBI chr 6:132,090,235...132,113,560
Ensembl chr 6:132,090,218...132,113,557
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 ISO MGI:3053078 (MGI:55926|PMID:6327825) RGD PMID:6327825 MGI:55926 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked ISO (PMID:24380861) RGD PMID:24380861 NCBI chr  X:10,400,363...10,414,010
Ensembl chr  X:10,400,366...10,413,995
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ISS
ISO
GO_REF:0000024
(MGI:5700304|PMID:16601681)
UniProt
RGD
PMID:16601681 GO_REF:0000024, MGI:5700304 NCBI chr 3:110,159,624...110,245,382
Ensembl chr 3:110,159,708...110,249,217
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:25244949) RGD PMID:25244949 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Vapa VAMP associated protein A ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 9:113,300,831...113,331,872
Ensembl chr 9:113,300,832...113,331,319
JBrowse link
G Vapb VAMP associated protein B and C ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A ISO (PMID:23355615) RGD PMID:23355615 NCBI chr 5:143,111,342...143,120,131
Ensembl chr 5:143,111,074...143,120,165
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum ISO
IEA
(PMID:23544079)
GO_REF:0000107
RGD
Ensembl
PMID:23544079 GO_REF:0000107 NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575
JBrowse link
G Ptx3 pentraxin 3 ISO (PMID:23544079) RGD PMID:23544079 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653
JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 ISO MGI:2180785|MGI:3053078 (MGI:1098064|PMID:9343248), (MGI:2148352|PMID:11483763), (MGI:3848729|PMID:19358828) RGD PMID:9343248, PMID:11483763, PMID:19358828 MGI:1098064, MGI:2148352, MGI:3848729 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Crp C-reactive protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:91,080,448...91,081,358
Ensembl chr13:91,054,974...91,093,713
JBrowse link
G Ltf lactotransferrin ISO (PMID:12522210) RGD PMID:12522210 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
G Mptx1 mucosal pentraxin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:91,772,927...91,827,231
Ensembl chr13:91,773,004...91,776,397
JBrowse link
G Ptx3 pentraxin 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vapb VAMP associated protein B and C ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl3 C-C motif chemokine ligand 3 ISO
ISS
(PMID:10841574)
GO_REF:0000024
RGD
UniProt
PMID:10841574 GO_REF:0000024 NCBI chr10:70,869,516...70,871,066
Ensembl chr10:70,869,513...70,871,066
JBrowse link
G Ccl4 C-C motif chemokine ligand 4 ISO (PMID:10841574) RGD PMID:10841574 NCBI chr10:70,870,926...70,886,357
Ensembl chr10:70,884,531...70,886,355
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO
IEA
(PMID:10841574)
GO_REF:0000107
RGD
Ensembl
PMID:10841574 GO_REF:0000107 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315
JBrowse link
G Hdac1 histone deacetylase 1 ISO (PMID:16540471) RGD PMID:16540471 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO
ISS
(PMID:17005673)
GO_REF:0000024
RGD
UniProt
PMID:17005673 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Hmox1 heme oxygenase 1 ISO (PMID:25086213) RGD PMID:25086213 NCBI chr19:14,508,634...14,515,455
Ensembl chr19:14,508,616...14,515,456
JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K ISO (PMID:18774950) RGD PMID:18774950 NCBI chr10:63,775,639...63,796,879
Ensembl chr10:63,776,378...63,795,899
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:2833704) RGD PMID:2833704 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Pou2f3 POU class 2 homeobox 3 IEA
ISO
GO_REF:0000107
(PMID:14645924)
Ensembl
RGD
PMID:14645924 GO_REF:0000107 NCBI chr 8:47,412,063...47,495,042
Ensembl chr 8:47,410,220...47,494,982
JBrowse link
G Rest RE1-silencing transcription factor ISO
ISS
(PMID:17555596)
GO_REF:0000024
RGD
UniProt
PMID:17555596 GO_REF:0000024 NCBI chr14:33,131,985...33,152,019
Ensembl chr14:33,134,511...33,164,141
JBrowse link
G Tardbp TAR DNA binding protein ISO (PMID:7745706) RGD PMID:7745706 NCBI chr 5:165,432,089...165,442,232
Ensembl chr 5:165,432,095...165,442,048
JBrowse link
G Tfap4 transcription factor AP-4 ISO (PMID:14645924), (PMID:16540471) RGD PMID:14645924, PMID:16540471 NCBI chr10:11,204,616...11,222,975
Ensembl chr10:11,206,226...11,223,370
JBrowse link
G Zfp639 zinc finger protein 639 ISO
ISS
(PMID:20484494)
GO_REF:0000024
RGD
UniProt
PMID:20484494 GO_REF:0000024 NCBI chr 2:118,906,479...118,917,491
Ensembl chr 2:118,910,587...118,916,563
JBrowse link
negative regulation by symbiont of host apoptotic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpinb9 serpin family B member 9 ISO (PMID:22090449) RGD PMID:22090449 NCBI chr17:32,648,846...32,673,047
Ensembl chr17:32,650,441...32,661,865
JBrowse link
negative regulation of transformation of host cell by virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbln1 fibulin 1 ISO (PMID:12200142) RGD PMID:12200142 NCBI chr 7:126,096,793...126,176,468
Ensembl chr 7:126,096,793...126,176,468
JBrowse link
pore formation in membrane of other organism term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsdmd gasdermin D ISO (MGI:5796057|PMID:27383986) RGD PMID:27383986 MGI:5796057 NCBI chr 7:116,889,147...116,894,134
Ensembl chr 7:116,889,572...116,894,134
JBrowse link
G Mpeg1 macrophage expressed 1 ISS
ISO
GO_REF:0000024
(MGI:6208630|PMID:26402460)
UniProt
RGD
PMID:26402460 GO_REF:0000024, MGI:6208630 NCBI chr 1:228,724,559...228,729,054
Ensembl chr 1:228,724,900...228,727,160
JBrowse link
positive regulation by host of symbiont catalytic activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sugt1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone ISO (PMID:23935490) RGD PMID:23935490 NCBI chr15:61,873,158...61,913,983
Ensembl chr15:61,873,056...61,914,072
JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO (MGI:5787727|PMID:26581985) RGD PMID:26581985 MGI:5787727 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 ISO (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575
JBrowse link
G Ppib peptidylprolyl isomerase B ISO (PMID:15989969) RGD PMID:15989969 NCBI chr 8:71,719,681...71,725,538
Ensembl chr 8:71,719,563...71,725,562
JBrowse link
G Stom stomatin ISO (MGI:5616479|PMID:25262680) RGD PMID:25262680 MGI:5616479 NCBI chr 3:14,515,576...14,538,199
Ensembl chr 3:14,514,868...14,538,241
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 ISO (PMID:17686842) RGD PMID:17686842 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158
JBrowse link
G Vapa VAMP associated protein A ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 9:113,300,831...113,331,872
Ensembl chr 9:113,300,832...113,331,319
JBrowse link
G Vapb VAMP associated protein B and C ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
G Ythdc2 YTH domain containing 2 ISO (PMID:21559518) RGD PMID:21559518 NCBI chr 1:182,072,386...182,141,399
Ensembl chr 1:182,085,899...182,140,570
JBrowse link
positive regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:25593157) RGD PMID:25593157 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Apoe apolipoprotein E ISO
IEA
(PMID:25122793)
GO_REF:0000107
RGD
Ensembl
PMID:25122793 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Cav2 caveolin 2 ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 ISO MGI:2180785|MGI:3027072 (MGI:1098064|PMID:9343248), (MGI:2148352|PMID:11483763) RGD PMID:9343248, PMID:11483763 MGI:1098064, MGI:2148352 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Cfl1 cofilin 1 ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:220,869,805...220,873,337
Ensembl chr 1:220,869,805...220,873,337
JBrowse link
G Csf1r colony stimulating factor 1 receptor IEA
ISO
GO_REF:0000107
UniProtKB:P01580 (MGI:4840165|PMID:20889566)
Ensembl
RGD
PMID:20889566 GO_REF:0000107, MGI:4840165 NCBI chr18:56,414,493...56,458,300
Ensembl chr18:56,414,488...56,458,300
JBrowse link
G Ifng interferon gamma ISO UniProtKB:P09581 (MGI:4840165|PMID:20889566) RGD PMID:20889566 MGI:4840165 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419
JBrowse link
G Igf2r insulin-like growth factor 2 receptor ISO (PMID:20889566) RGD PMID:20889566 NCBI chr 1:48,176,095...48,264,482
Ensembl chr 1:48,176,106...48,264,477
JBrowse link
G LOC100911237 zinc finger protein 420-like ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:31,494,043...31,519,034 JBrowse link
G Pc pyruvate carboxylase ISO (PMID:23861867) RGD PMID:23861867 NCBI chr 1:219,759,157...219,859,854
Ensembl chr 1:219,759,183...219,859,848
JBrowse link
G Ppib peptidylprolyl isomerase B ISO (PMID:15989969) RGD PMID:15989969 NCBI chr 8:71,719,681...71,725,538
Ensembl chr 8:71,719,563...71,725,562
JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav2 caveolin 2 ISO
IEA
(PMID:25556234)
GO_REF:0000107
RGD
Ensembl
PMID:25556234 GO_REF:0000107 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638
JBrowse link
G LOC100911237 zinc finger protein 420-like ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:31,494,043...31,519,034 JBrowse link
G Pc pyruvate carboxylase ISO
IEA
(PMID:23861867)
GO_REF:0000107
RGD
Ensembl
PMID:23861867 GO_REF:0000107 NCBI chr 1:219,759,157...219,859,854
Ensembl chr 1:219,759,183...219,859,848
JBrowse link
G Vapa VAMP associated protein A ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 9:113,300,831...113,331,872
Ensembl chr 9:113,300,832...113,331,319
JBrowse link
G Vapb VAMP associated protein B and C ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
positive regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd1 chromodomain helicase DNA binding protein 1 ISO (PMID:25297984) RGD PMID:25297984 NCBI chr 1:57,692,828...57,756,762
Ensembl chr 1:57,692,836...57,755,485
JBrowse link
G Ctdp1 CTD phosphatase subunit 1 ISO (PMID:15723517) RGD PMID:15723517 NCBI chr18:76,922,913...76,985,095
Ensembl chr18:76,922,934...76,984,203
JBrowse link
G Ep300 E1A binding protein p300 ISO (PMID:16687403) RGD PMID:16687403 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 ISO (PMID:26748656) RGD PMID:26748656 NCBI chr16:20,645,956...20,652,890
Ensembl chr16:20,645,957...20,652,889
JBrowse link
G Gtf2b general transcription factor IIB IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:248,709,433...248,727,741
Ensembl chr 2:248,715,281...248,727,741
JBrowse link
G Hpn hepsin IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:15614436)
Ensembl
UniProt
RGD
PMID:15614436 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:89,534,112...89,549,575
Ensembl chr 1:89,534,106...89,543,967
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:2833704) RGD PMID:2833704 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 IEA
ISO
GO_REF:0000107
(PMID:7657162)
Ensembl
RGD
PMID:7657162 GO_REF:0000107 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 ISO UniProtKB:P04608 (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575
JBrowse link
G Rrp1b ribosomal RNA processing 1B ISO (PMID:26311876) RGD PMID:26311876 NCBI chr20:10,844,234...10,869,830
Ensembl chr20:10,844,266...10,869,821
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO
IEA
(PMID:16687403)
GO_REF:0000107
RGD
Ensembl
PMID:16687403 GO_REF:0000107 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 ISO (PMID:16687403) RGD PMID:16687403 NCBI chr20:13,679,955...13,702,821
Ensembl chr20:13,680,716...13,704,931
JBrowse link
G Snw1 SNW domain containing 1 ISO (PMID:15905409), (PMID:19818711) RGD PMID:15905409, PMID:19818711 NCBI chr 6:111,483,698...111,507,782
Ensembl chr 6:111,483,703...111,507,782
JBrowse link
G Sp1 Sp1 transcription factor ISO (PMID:2833704) RGD PMID:2833704 NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629
JBrowse link
G Taf11 TATA-box binding protein associated factor 11 ISO (PMID:9108034) RGD PMID:9108034 NCBI chr20:7,476,648...7,484,417
Ensembl chr20:7,476,651...7,482,747
JBrowse link
G Tfap4 transcription factor AP-4 ISO (PMID:2833704) RGD PMID:2833704 NCBI chr10:11,204,616...11,222,975
Ensembl chr10:11,206,226...11,223,370
JBrowse link
G Zfp639 zinc finger protein 639 ISO
ISS
(PMID:20484494)
GO_REF:0000024
RGD
UniProt
PMID:20484494 GO_REF:0000024 NCBI chr 2:118,906,479...118,917,491
Ensembl chr 2:118,910,587...118,916,563
JBrowse link
positive regulation by symbiont of host autophagy term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 ISO
IEA
UniProtKB:O95352 (PMID:28389568)
GO_REF:0000107
RGD
Ensembl
PMID:28389568 GO_REF:0000107 NCBI chr20:49,301,783...49,393,147
Ensembl chr20:49,318,308...49,393,140
JBrowse link
G Atg7 autophagy related 7 ISO UniProtKB:Q9H1Y0 (PMID:28389568) RGD PMID:28389568 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Irgm immunity-related GTPase M ISO (PMID:16888103), (PMID:28389568)
(MGI:3656111|PMID:16888103)
RGD PMID:16888103, PMID:28389568 MGI:3656111 NCBI chr10:34,213,885...34,221,968
Ensembl chr10:34,213,936...34,221,928
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO UniProtKB:Q8IYT8 (PMID:28389568) RGD PMID:28389568 NCBI chr12:51,908,105...51,934,704
Ensembl chr12:51,908,448...51,934,702
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 ISO UniProtKB:O75385 (PMID:28389568) RGD PMID:28389568 NCBI chr10:48,050,079...48,129,377
Ensembl chr10:48,050,803...48,129,377
JBrowse link
positive regulation of apoptotic process by virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2-associated agonist of cell death ISO (MGI:3057092|PMID:15231831) RGD PMID:15231831 MGI:3057092 NCBI chr 1:222,198,516...222,207,459
Ensembl chr 1:222,198,534...222,207,453
JBrowse link
G Bcl2l11 BCL2 like 11 ISO (MGI:3057092|PMID:15231831) RGD PMID:15231831 MGI:3057092 NCBI chr 3:120,726,906...120,764,192
Ensembl chr 3:120,726,906...120,764,192
JBrowse link
G Ccr5 C-C motif chemokine receptor 5 IMP HIV-1 RGD PMID:19034668 RGD:4890424 NCBI chr 8:133,192,398...133,215,599
Ensembl chr 8:133,197,032...133,215,614
JBrowse link
positive regulation of killing of cells of other organism term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec7a C-type lectin domain containing 7A ISO
IBA
(PMID:19358895)
PMID:21873635
RGD PMID:19358895, PMID:21873635 RGD:13792537 NCBI chr 4:163,216,152...163,227,367
Ensembl chr 4:163,216,163...163,227,334
JBrowse link
G Fcer2 Fc fragment of IgE receptor II ISO (PMID:7544003) RGD PMID:7544003 NCBI chr12:2,233,772...2,245,324
Ensembl chr12:2,233,778...2,245,324
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase ISO (PMID:22832495) RGD PMID:22832495 NCBI chr 4:157,676,336...157,680,322
Ensembl chr 4:157,676,595...157,679,962
JBrowse link
G Ifng interferon gamma ISO (PMID:7544003) RGD PMID:7544003 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419
JBrowse link
G Nos2 nitric oxide synthase 2 ISO
IEA
(PMID:7544003)
GO_REF:0000107
RGD
Ensembl
PMID:7544003 GO_REF:0000107 NCBI chr10:66,188,290...66,221,621
Ensembl chr10:66,189,786...66,313,190
JBrowse link
G Prf1 perforin 1 ISO
IEA
(PMID:9756476)
GO_REF:0000107
RGD
Ensembl
PMID:9756476 GO_REF:0000107 NCBI chr20:30,915,294...30,920,804
Ensembl chr20:30,915,213...30,921,382
JBrowse link
G Syk spleen associated tyrosine kinase IEA
ISO
GO_REF:0000107
(PMID:19358895)
Ensembl
RGD
PMID:19358895 GO_REF:0000107 NCBI chr17:12,614,311...12,669,568
Ensembl chr17:12,614,311...12,669,573
JBrowse link
positive regulation of neutrophil mediated killing of fungus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 ISO (PMID:15546957) RGD PMID:15546957 NCBI chr 1:21,525,421...21,537,872
Ensembl chr 1:21,525,421...21,537,863
JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 IEA
ISO
GO_REF:0000107
(MGI:5586806|PMID:10725737)
Ensembl
RGD
PMID:10725737 GO_REF:0000107, MGI:5586806 NCBI chr14:18,743,678...18,745,457
Ensembl chr14:18,743,685...18,745,457
JBrowse link
G Pomc proopiomelanocortin ISO (PMID:10670585) RGD PMID:10670585 NCBI chr 6:28,382,937...28,388,771
Ensembl chr 6:28,382,962...28,388,967
JBrowse link
positive regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 F2R like trypsin receptor 1 ISO (PMID:21501162) RGD PMID:21501162 NCBI chr 2:25,222,324...25,235,275
Ensembl chr 2:25,222,328...25,235,275
JBrowse link
regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcl6 C-X-C motif chemokine ligand 6 ISO MGI:4819800 (MGI:4819434|PMID:20643340) RGD PMID:20643340 MGI:4819434 NCBI chr14:18,860,201...18,920,839
Ensembl chr14:18,860,264...18,862,407
JBrowse link
suppression by virus of host apoptotic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2-associated agonist of cell death ISO MGI:2675966 (MGI:3057092|PMID:15231831) RGD PMID:15231831 MGI:3057092 NCBI chr 1:222,198,516...222,207,459
Ensembl chr 1:222,198,534...222,207,453
JBrowse link
G Bcl2l1 Bcl2-like 1 ISO (PMID:15231831) RGD PMID:15231831 NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810
JBrowse link
suppression by virus of host autophagy term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 ISO (PMID:23290079) RGD PMID:23290079 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
transformation of host cell by virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 IEP RGD PMID:9630249 RGD:10045968 NCBI chr 7:144,865,302...144,871,592
Ensembl chr 7:144,865,608...144,871,585
JBrowse link
G Hyal2 hyaluronidase 2 IDA
ISO
IEA
suppresses
(PMID:11296287)
GO_REF:0000107
RGD
Ensembl
PMID:11296287, PMID:12584308 GO_REF:0000107, RGD:633153 NCBI chr 8:116,324,062...116,328,978
Ensembl chr 8:116,324,040...116,328,978
JBrowse link
G Insr insulin receptor ISO
IEA
(PMID:17001305)
GO_REF:0000107
RGD
Ensembl
PMID:17001305 GO_REF:0000107 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414
JBrowse link
G Mmp9 matrix metallopeptidase 9 IDA RGD PMID:20000122 RGD:2325807 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IMP RGD PMID:16256070 RGD:7207780 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.