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ONTOLOGY REPORT - ANNOTATIONS


Term:protein K11-linked deubiquitination
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Accession:GO:0035871 term browser browse the term
Definition:A protein deubiquitination process in which a K11-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 11 of the ubiquitin monomers, is removed from a protein.
Synonyms:exact_synonym: protein K11-linked deubiquitinylation;   protein K11-linked deubiquitylation


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protein K11-linked deubiquitination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otub2 OTU deubiquitinase, ubiquitin aldehyde binding 2 ISO
IBA
(PMID:23827681)
PMID:21873635
RGD PMID:23827681, PMID:21873635 RGD:13792537 NCBI chr 6:127,282,445...127,301,086
Ensembl chr 6:127,282,466...127,301,083
JBrowse link
G Otud3 OTU deubiquitinase 3 ISO
IBA
(PMID:23827681), (PMID:26280536)
PMID:21873635
RGD PMID:23827681, PMID:26280536, PMID:21873635 RGD:13792537 NCBI chr 5:157,346,286...157,368,450
Ensembl chr 5:157,346,286...157,368,472
JBrowse link
G Otud6a OTU deubiquitinase 6A ISO
IBA
(PMID:23827681)
PMID:21873635
RGD PMID:23827681, PMID:21873635 RGD:13792537 NCBI chr  X:70,256,299...70,257,746
Ensembl chr  X:70,256,737...70,257,609
JBrowse link
G Otud7a OTU deubiquitinase 7A ISO
IBA
(PMID:23827681)
PMID:21873635
RGD PMID:23827681, PMID:21873635 RGD:13792537 NCBI chr 1:124,311,873...124,655,437
Ensembl chr 1:124,625,985...124,653,820
JBrowse link
G Otud7b OTU deubiquitinase 7B ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:20622874), (PMID:23827681)
ParkinsonsUK-UCL
RGD
PMID:20622874, PMID:23827681, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 2:198,231,353...198,302,220
Ensembl chr 2:198,231,291...198,300,201
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 ISO (PMID:23827681) RGD PMID:23827681 NCBI chr 1:14,401,103...14,416,369
Ensembl chr 1:14,402,913...14,412,807
JBrowse link
G Usp30 ubiquitin specific peptidase 30 ISO
ISS
(PMID:25621951)
GO_REF:0000024
RGD
UniProt
PMID:25621951 GO_REF:0000024 NCBI chr12:48,262,663...48,316,580
Ensembl chr12:48,262,658...48,316,722
JBrowse link
G Usp37 ubiquitin specific peptidase 37 ISO (PMID:21596315) RGD PMID:21596315 NCBI chr 9:81,717,626...81,818,421
Ensembl chr 9:81,716,876...81,772,851
JBrowse link
G Vcpip1 valosin containing protein interacting protein 1 ISO
IBA
ISS
(PMID:23827681)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23827681, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:9,231,180...9,257,821
Ensembl chr 5:9,230,984...9,257,934
JBrowse link
G Yod1 YOD1 deubiquitinase ISS
ISO
GO_REF:0000024
(PMID:23827681), (PMID:24068323)
UniProt
RGD
PMID:23827681, PMID:24068323 GO_REF:0000024 NCBI chr13:47,441,296...47,443,013
Ensembl chr13:47,440,803...47,443,188
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      primary metabolic process 10901
        protein metabolic process 6214
          proteolysis 1893
            protein modification by small protein removal 152
              protein deubiquitination 121
                protein K11-linked deubiquitination 10
Path 2
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      organic substance metabolic process 11636
        macromolecule metabolic process 10081
          macromolecule modification 4142
            protein modification process 3937
              cellular protein modification process 3937
                protein modification by small protein conjugation or removal 953
                  protein modification by small protein removal 152
                    protein deubiquitination 121
                      protein K11-linked deubiquitination 10
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.