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ONTOLOGY REPORT - ANNOTATIONS


Term:skeletal muscle cell differentiation
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Accession:GO:0035914 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of a skeletal muscle cell, a somatic cell located in skeletal muscle.


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skeletal muscle cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankrd1 ankyrin repeat domain 1 JBrowse link 1 254,726,985 254,745,673 RGD:1624291
RGD:1600115
G Ankrd2 ankyrin repeat domain 2 JBrowse link 1 261,281,859 261,291,307 RGD:1624291
RGD:1600115
G Ankrd33 ankyrin repeat domain 33 JBrowse link 7 142,755,896 142,759,666 RGD:1624291
G Asb2 ankyrin repeat and SOCS box-containing 2 JBrowse link 6 127,212,325 127,248,451 RGD:1624291
G Atf3 activating transcription factor 3 JBrowse link 13 109,817,892 109,849,632 RGD:1624291
RGD:1600115
G Bcl9 BCL9, transcription coactivator JBrowse link 2 199,334,644 199,420,083 RGD:1624291
RGD:1600115
G Bcl9l BCL9 like JBrowse link 8 48,805,684 48,835,794 RGD:1624291
RGD:1600115
G Btg2 BTG anti-proliferation factor 2 JBrowse link 13 50,913,185 50,916,944 RGD:1624291
RGD:1600115
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 JBrowse link 1 12,823,363 12,825,806 RGD:1624291
RGD:1600115
G Cops2 COP9 signalosome subunit 2 JBrowse link 3 118,109,394 118,137,125 RGD:1624291
RGD:1600115
G Dmrta2 DMRT-like family A2 JBrowse link 5 129,754,295 129,760,045 RGD:1624291
G Eef2 eukaryotic translation elongation factor 2 JBrowse link 7 11,401,501 11,406,771 RGD:10401256
G Egr1 early growth response 1 JBrowse link 18 27,657,903 27,660,101 RGD:1624291
RGD:1600115
G Egr2 early growth response 2 JBrowse link 20 22,452,170 22,461,018 RGD:1624291
RGD:1600115
G Emd emerin JBrowse link X 156,452,847 156,455,858 RGD:1624291
RGD:1600115
G Eomes eomesodermin JBrowse link 8 127,144,367 127,152,618 RGD:1624291
RGD:1600115
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 6 109,300,433 109,303,299 RGD:1624291
RGD:1600115
G Foxn2 forkhead box N2 JBrowse link 6 12,158,127 12,205,450 RGD:1624291
RGD:1600115
G Gtf3c5 general transcription factor IIIC subunit 5 JBrowse link 3 7,144,354 7,164,678 RGD:1624291
RGD:1600115
G Heyl hes-related family bHLH transcription factor with YRPW motif-like JBrowse link 5 140,923,914 140,940,905 RGD:1624291
RGD:1600115
G Hivep3 human immunodeficiency virus type I enhancer binding protein 3 JBrowse link 5 138,774,501 139,077,403 RGD:1624291
RGD:1600115
G Hlf HLF transcription factor, PAR bZIP family member JBrowse link 10 77,836,352 77,918,656 RGD:1624291
RGD:1600115
G Hmg20b high mobility group 20 B JBrowse link 7 11,238,594 11,243,312 RGD:1624291
RGD:1600115
G Klf5 Kruppel-like factor 5 JBrowse link 15 83,703,796 83,722,921 RGD:1624291
G Klhl41 kelch-like family member 41 JBrowse link 3 55,910,177 55,923,303 RGD:1624291
RGD:1600115
G Lemd2 LEM domain containing 2 JBrowse link 20 5,779,742 5,786,213 RGD:1624291
RGD:1600115
G Lemd3 LEM domain containing 3 JBrowse link 7 62,976,671 63,045,860 RGD:1624291
G LOC108348120 LEM domain-containing protein 2-like JBrowse link 20 6,544,925 6,556,668 RGD:1600115
G Maff MAF bZIP transcription factor F JBrowse link 7 120,580,743 120,592,095 RGD:1624291
RGD:1600115
G Med20 mediator complex subunit 20 JBrowse link 9 15,379,379 15,393,131 RGD:1624291
G Mef2c myocyte enhancer factor 2C JBrowse link 2 11,658,534 11,822,788 RGD:1624291
RGD:1600115
G Mef2d myocyte enhancer factor 2D JBrowse link 2 187,511,775 187,541,285 RGD:1624291
RGD:1600115
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:1624291
G Myf5 myogenic factor 5 JBrowse link 7 49,729,533 49,732,974 RGD:1624291
RGD:13792537
G Myf6 myogenic factor 6 JBrowse link 7 49,739,643 49,741,490 RGD:1624291
RGD:13792537
G Mylk2 myosin light chain kinase 2 JBrowse link 3 148,386,185 148,397,851 RGD:1624291
G Myod1 myogenic differentiation 1 JBrowse link 1 102,396,538 102,399,248 RGD:1624291
RGD:13792537
RGD:1600115
G Myog myogenin JBrowse link 13 51,126,459 51,129,048 RGD:13792537
G Ngfr nerve growth factor receptor JBrowse link 10 83,389,828 83,408,061 RGD:1580249
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:1624291
RGD:1600115
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 JBrowse link 7 142,899,358 142,920,216 RGD:1624291
RGD:1600115
G Nupr1 nuclear protein 1, transcriptional regulator JBrowse link 1 194,767,484 194,769,519 RGD:1624291
G Pax5 paired box 5 JBrowse link 5 60,007,587 60,191,973 RGD:1624291
RGD:1600115
G Phox2b paired-like homeobox 2b JBrowse link 14 42,711,169 42,718,707 RGD:1624291
RGD:1600115
G Plagl1 PLAG1 like zinc finger 1 JBrowse link 1 7,219,587 7,270,169 RGD:1624291
G Rb1 RB transcriptional corepressor 1 JBrowse link 15 55,081,582 55,209,060 RGD:1624291
RGD:1600115
G Sap30 Sin3A associated protein 30 JBrowse link 16 36,115,942 36,121,310 RGD:1624291
RGD:1600115
G Scx scleraxis bHLH transcription factor JBrowse link 7 117,519,075 117,521,093 RGD:1624291
RGD:1600115
G Smyd1 SET and MYND domain containing 1 JBrowse link 4 99,071,122 99,125,143 RGD:1624291
RGD:1600115
G Snw1 SNW domain containing 1 JBrowse link 6 111,483,698 111,507,782 RGD:1624291
G Sox11 SRY-box transcription factor 11 JBrowse link 6 46,629,967 46,631,988 RGD:1624291
RGD:1600115
G Sox8 SRY-box transcription factor 8 JBrowse link 10 14,932,348 14,937,336 RGD:1624291
RGD:1600115
G Vax1 ventral anterior homeobox 1 JBrowse link 1 280,334,897 280,338,813 RGD:1624291
RGD:1600115
G Wnt3a Wnt family member 3A JBrowse link 10 45,598,898 45,643,151 RGD:1624291
RGD:1600115
G Zfp689 zinc finger protein 689 JBrowse link 1 198,894,000 198,900,364 RGD:1624291
negative regulation of satellite cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akirin1 akirin 1 JBrowse link 5 141,415,226 141,430,627 RGD:1600115
RGD:1624291
G Ephb1 Eph receptor B1 JBrowse link 8 110,376,954 110,813,193 RGD:1624291
RGD:1600115
G Mstn myostatin JBrowse link 9 53,310,977 53,315,804 RGD:1600115
G Six4 SIX homeobox 4 JBrowse link 6 95,984,868 95,999,709 RGD:1624291
RGD:1600115
negative regulation of skeletal muscle cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Capn3 calpain 3 JBrowse link 3 112,227,486 112,278,408 RGD:1624291
G Myocd myocardin JBrowse link 10 51,682,053 51,781,458 RGD:1624291
RGD:1600115
G S100b S100 calcium binding protein B JBrowse link 20 13,130,633 13,142,856 RGD:5508829
positive regulation of skeletal muscle cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arntl aryl hydrocarbon receptor nuclear translocator-like JBrowse link 1 178,039,002 178,137,469 RGD:1600115
RGD:1624291
G Gpc1 glypican 1 JBrowse link 9 99,998,275 100,026,818 RGD:1600115
RGD:1624291
G Mef2c myocyte enhancer factor 2C JBrowse link 2 11,658,534 11,822,788 RGD:1624291
RGD:1600115
G Mir675 microRNA 675 JBrowse link 1 215,745,981 215,746,064 RGD:1624291
positive regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rbm24 RNA binding motif protein 24 JBrowse link 17 18,671,037 18,682,876 RGD:1624291
RGD:1600115
positive regulation of tongue muscle cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 JBrowse link 4 116,261,796 116,278,615 RGD:1624291
RGD:1600115
G Tbx1 T-box transcription factor 1 JBrowse link 11 86,552,022 86,561,647 RGD:1624291
RGD:1600115
regulation of skeletal muscle cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddx17 DEAD-box helicase 17 JBrowse link 7 120,761,843 120,765,012 RGD:1624291
G Ddx5 DEAD-box helicase 5 JBrowse link 10 94,979,759 94,988,461 RGD:1624291
G Klhl41 kelch-like family member 41 JBrowse link 3 55,910,177 55,923,303 RGD:1624291
RGD:13792537
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 JBrowse link 15 8,730,871 8,757,165 RGD:1624291
RGD:1600115
G Rbfox1 RNA binding fox-1 homolog 1 JBrowse link 10 8,312,961 10,437,778 RGD:1624291
RGD:1600115
G Six1 SIX homeobox 1 JBrowse link 6 95,929,060 95,934,296 RGD:1624291
RGD:1600115
G Uqcc2 ubiquinol-cytochrome c reductase complex assembly factor 2 JBrowse link 20 5,712,200 5,723,902 RGD:1624291
RGD:1600115
regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nln neurolysin JBrowse link 2 34,086,970 34,185,835 RGD:1624291
RGD:1600115
skeletal muscle fiber differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Klhl40 kelch-like family member 40 JBrowse link 8 130,416,265 130,421,871 RGD:1624291
G Six4 SIX homeobox 4 JBrowse link 6 95,984,868 95,999,709 RGD:1624291
RGD:1600115
skeletal muscle satellite cell commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pax7 paired box 7 JBrowse link 5 158,211,001 158,313,510 RGD:1624291
RGD:1600115
skeletal muscle satellite cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdon cell adhesion associated, oncogene regulated JBrowse link 8 36,625,757 36,712,091 RGD:1624291
RGD:1600115
G Klf5 Kruppel-like factor 5 JBrowse link 15 83,703,796 83,722,921 RGD:1624291
RGD:1600115
G Megf10 multiple EGF-like domains 10 JBrowse link 18 52,215,652 52,366,212 RGD:1624291
RGD:1600115
G Mylk2 myosin light chain kinase 2 JBrowse link 3 148,386,185 148,397,851 RGD:1600115
RGD:1624291
G Selenon selenoprotein N JBrowse link 5 152,748,497 152,765,489 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19245
    cellular process 17125
      cellular developmental process 4400
        cell differentiation 4180
          skeletal muscle cell differentiation 80
            negative regulation of skeletal muscle cell differentiation + 7
            positive regulation of skeletal muscle cell differentiation + 7
            regulation of skeletal muscle cell differentiation + 22
            skeletal muscle fiber differentiation + 6
            skeletal muscle satellite cell differentiation + 10
Path 2
Term Annotations click to browse term
  biological_process 19245
    developmental process 6597
      anatomical structure development 6063
        multicellular organism development 5534
          system development 5081
            animal organ development 3881
              muscle organ development 417
                skeletal muscle organ development 219
                  skeletal muscle tissue development 207
                    skeletal muscle cell differentiation 80
                      negative regulation of skeletal muscle cell differentiation + 7
                      positive regulation of skeletal muscle cell differentiation + 7
                      regulation of skeletal muscle cell differentiation + 22
                      skeletal muscle fiber differentiation + 6
                      skeletal muscle satellite cell differentiation + 10
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.