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ONTOLOGY REPORT - ANNOTATIONS


Term:response to platelet-derived growth factor
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Accession:GO:0036119 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platelet-derived growth factor stimulus.
Synonyms:exact_synonym: response to PDGF stimulus;   response to platelet-derived growth factor stimulus


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response to platelet-derived growth factor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FER FER tyrosine kinase ISS UniProtKB GO_REF:0000024 NCBI chr 5:108,746,085...109,196,841
Ensembl chr 5:108,747,841...109,196,841
JBrowse link
G ITGB3 integrin subunit beta 3 ISO RGD PMID:21932665 RGD:8693383 NCBI chr17:47,253,827...47,313,743
Ensembl chr17:47,253,846...47,313,735
Ensembl chr17:47,253,846...47,313,735
Ensembl chr17:47,253,846...47,313,735
JBrowse link
cellular response to platelet-derived growth factor stimulus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARPC2 actin related protein 2/3 complex subunit 2 ISO RGD PMID:22619279 RGD:10047170 NCBI chr 2:218,217,138...218,254,348
Ensembl chr 2:218,217,141...218,254,356
JBrowse link
G ATP7A ATPase copper transporting alpha IEA Ensembl GO_REF:0000107 NCBI chr  X:77,910,693...78,050,395
Ensembl chr  X:77,910,656...78,050,395
JBrowse link
G CBL Cbl proto-oncogene IEA Ensembl GO_REF:0000107 NCBI chr11:119,206,339...119,308,149
Ensembl chr11:119,206,298...119,313,926
Ensembl chr11:119,206,298...119,313,926
JBrowse link
G CCL2 C-C motif chemokine ligand 2 ISO RGD PMID:7589574 RGD:8549588 NCBI chr17:34,255,285...34,257,203
Ensembl chr17:34,255,218...34,257,203
JBrowse link
G CCNA2 cyclin A2 IEA Ensembl GO_REF:0000107 NCBI chr 4:121,816,444...121,823,883
Ensembl chr 4:121,816,444...121,823,883
Ensembl chr 4:121,816,444...121,823,883
JBrowse link
G CORO1B coronin 1B IMP (PMID:22619279) UniProtKB PMID:22619279 NCBI chr11:67,435,510...67,443,809
Ensembl chr11:67,435,510...67,443,821
JBrowse link
G CREB1 cAMP responsive element binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:207,529,943...207,605,988
Ensembl chr 2:207,529,737...207,605,988
JBrowse link
G DNMT1 DNA methyltransferase 1 ISO RGD PMID:23423710 RGD:9588226 NCBI chr19:10,133,346...10,194,953
Ensembl chr19:10,133,345...10,231,286
JBrowse link
G ERRFI1 ERBB receptor feedback inhibitor 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:8,011,725...8,026,309
Ensembl chr 1:8,004,404...8,026,309
JBrowse link
G FN1 fibronectin 1 ISO RGD PMID:15627306 RGD:7205462 NCBI chr 2:215,360,862...215,436,167
Ensembl chr 2:215,360,440...215,436,073
JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr 6:111,660,332...111,873,452
Ensembl chr 6:111,660,332...111,873,452
JBrowse link
G GJA1 gap junction protein alpha 1 ISO (PMID:18239136) AgBase PMID:18239136 NCBI chr 6:121,435,646...121,449,727
Ensembl chr 6:121,435,595...121,449,727
JBrowse link
G GJA5 gap junction protein alpha 5 ISO (PMID:18239136) AgBase PMID:18239136 NCBI chr 1:147,756,199...147,781,127
Ensembl chr 1:147,756,199...147,773,362
JBrowse link
G HAS1 hyaluronan synthase 1 IDA (PMID:17324121) UniProtKB PMID:17324121 NCBI chr19:51,713,112...51,723,991
Ensembl chr19:51,713,112...51,723,994
Ensembl chr19:51,713,112...51,723,994
JBrowse link
G HAS2 hyaluronan synthase 2 IDA (PMID:17324121) UniProtKB PMID:17324121 NCBI chr 8:121,612,116...121,641,440
Ensembl chr 8:121,612,116...121,641,440
JBrowse link
G HYAL1 hyaluronidase 1 IDA (PMID:17324121) UniProtKB PMID:17324121 NCBI chr 3:50,299,889...50,312,951
Ensembl chr 3:50,299,890...50,312,381
JBrowse link
G IQGAP1 IQ motif containing GTPase activating protein 1 IEA Ensembl GO_REF:0000107 NCBI chr15:90,388,242...90,502,239
Ensembl chr15:90,388,242...90,502,239
JBrowse link
G ITGB3 integrin subunit beta 3 ISO (MGI:MGI:5462513|PMID:22984613) MGI PMID:22984613 MGI:MGI:5462513 NCBI chr17:47,253,827...47,313,743
Ensembl chr17:47,253,846...47,313,735
Ensembl chr17:47,253,846...47,313,735
Ensembl chr17:47,253,846...47,313,735
JBrowse link
G LTBP1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:14708940 RGD:10412060 NCBI chr 2:32,902,129...33,399,509
Ensembl chr 2:32,946,953...33,399,509
JBrowse link
G MARS1 methionyl-tRNA synthetase 1 IDA (PMID:10791971) CAFA PMID:10791971 NCBI chr12:57,488,068...57,516,655
Ensembl chr12:57,475,445...57,517,569
JBrowse link
G MIR125A microRNA 125a ISO RGD PMID:30156956 RGD:26884369 NCBI chr19:51,693,254...51,693,339
Ensembl chr19:51,693,254...51,693,339
JBrowse link
G MTSS2 MTSS I-BAR domain containing 2 IDA (PMID:20875796) UniProtKB PMID:20875796 NCBI chr16:70,661,204...70,686,053
Ensembl chr16:70,661,204...70,686,053
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor IEA Ensembl GO_REF:0000107 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
G MYH9 myosin heavy chain 9 ISO RGD PMID:8888698 RGD:11533927 NCBI chr22:36,281,280...36,387,967
Ensembl chr22:36,281,277...36,388,067
Ensembl chr22:36,281,277...36,388,067
JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 ISO RGD PMID:11882580 RGD:11556216 NCBI chr 9:75,890,646...76,362,975
Ensembl chr 9:75,890,644...76,362,975
Ensembl chr 9:75,890,644...76,362,975
JBrowse link
G PDGFD platelet derived growth factor D IEA Ensembl GO_REF:0000107 NCBI chr11:103,907,189...104,164,147
Ensembl chr11:103,907,189...104,164,379
JBrowse link
G PDGFRB platelet derived growth factor receptor beta IEA GOC GO_REF:0000108 NCBI chr 5:150,113,839...150,155,845
Ensembl chr 5:150,113,839...150,155,872
JBrowse link
G PRKCE protein kinase C epsilon ISO PMID:22619279 UniProt PMID:22619279 RGD:10047170 NCBI chr 2:45,651,315...46,187,990
Ensembl chr 2:45,651,345...46,187,990
JBrowse link
G PTN pleiotrophin IEA Ensembl GO_REF:0000107 NCBI chr 7:137,227,341...137,343,733
Ensembl chr 7:137,227,341...137,343,774
JBrowse link
G RASA1 RAS p21 protein activator 1 ISO RGD PMID:9612285 RGD:10002728 NCBI chr 5:87,267,845...87,391,916
Ensembl chr 5:87,267,883...87,391,931
JBrowse link
G RDX radixin IEA Ensembl GO_REF:0000107 NCBI chr11:110,174,922...110,296,614
Ensembl chr11:109,864,295...110,296,712
JBrowse link
G SERPINE1 serpin family E member 1 ISO RGD PMID:10615432 RGD:8547892 NCBI chr 7:101,127,104...101,139,247
Ensembl chr 7:101,127,104...101,139,247
Ensembl chr 7:101,127,104...101,139,247
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr20:37,344,690...37,406,050
Ensembl chr20:37,344,685...37,406,050
JBrowse link
G SYAP1 synapse associated protein 1 IMP (PMID:23300339) UniProtKB PMID:23300339 NCBI chr  X:16,719,612...16,765,340
Ensembl chr  X:16,719,612...16,765,340
JBrowse link
G YES1 YES proto-oncogene 1, Src family tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr18:721,588...812,846
Ensembl chr18:721,588...812,546
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18626
    response to stimulus 10122
      response to endogenous stimulus 2161
        response to platelet-derived growth factor 36
          cellular response to platelet-derived growth factor stimulus 35
Path 2
Term Annotations click to browse term
  biological_process 18626
    response to stimulus 10122
      response to chemical 5615
        response to organic substance 4176
          response to growth factor 867
            response to platelet-derived growth factor 36
              cellular response to platelet-derived growth factor stimulus 35
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.