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ONTOLOGY REPORT - ANNOTATIONS


Term:response to platelet-derived growth factor
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Accession:GO:0036119 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platelet-derived growth factor stimulus.
Synonyms:exact_synonym: response to PDGF stimulus;   response to platelet-derived growth factor stimulus


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response to platelet-derived growth factor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fer fer (fms/fps related) protein kinase IDA (MGI:MGI:5319623|PMID:7623846) UniProtKB PMID:7623846 MGI:MGI:5319623 NCBI chr17:63,862,073...64,146,519
Ensembl chr17:63,863,062...64,139,496
JBrowse link
G Itgb3 integrin beta 3 ISO RGD PMID:21932665 RGD:8693383 NCBI chr11:104,608,000...104,670,476
Ensembl chr11:104,608,000...104,670,476
JBrowse link
cellular response to platelet-derived growth factor stimulus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arpc2 actin related protein 2/3 complex, subunit 2 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 1:74,236,490...74,268,209
Ensembl chr 1:74,236,084...74,268,209
JBrowse link
G Atp7a ATPase, Cu++ transporting, alpha polypeptide ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr  X:106,027,224...106,128,161
Ensembl chr  X:106,027,276...106,124,926
JBrowse link
G Cbl Casitas B-lineage lymphoma ISO RGD PMID:15128873 RGD:1642627 NCBI chr 9:44,142,976...44,234,259
Ensembl chr 9:44,142,976...44,234,049
JBrowse link
G Ccl2 chemokine (C-C motif) ligand 2 ISO RGD PMID:7589574 RGD:8549588 NCBI chr11:82,035,577...82,037,452
Ensembl chr11:82,035,571...82,037,453
JBrowse link
G Ccna2 cyclin A2 ISO RGD PMID:18667424 RGD:10054494 NCBI chr 3:36,564,865...36,573,038
Ensembl chr 3:36,564,865...36,572,150
JBrowse link
G Coro1b coronin, actin binding protein 1B ISO RGD
MGI
GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:4834177 NCBI chr19:4,148,611...4,154,035
Ensembl chr19:4,148,619...4,154,035
JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO RGD PMID:21505978 RGD:10059431 NCBI chr 1:64,532,794...64,604,548
Ensembl chr 1:64,532,645...64,604,548
JBrowse link
G Dnmt1 DNA methyltransferase (cytosine-5) 1 ISO RGD PMID:23423710 RGD:9588226 NCBI chr 9:20,907,206...20,959,888
Ensembl chr 9:20,907,209...20,959,888
JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 ISO RGD PMID:15556944 RGD:9685545 NCBI chr 4:150,853,796...150,868,889
Ensembl chr 4:150,853,919...150,868,892
JBrowse link
G Fn1 fibronectin 1 ISO RGD PMID:15627306 RGD:7205462 NCBI chr 1:71,585,473...71,653,280
Ensembl chr 1:71,585,520...71,653,200
JBrowse link
G Fyn Fyn proto-oncogene IDA (MGI:MGI:3723332|PMID:17623777) MGI PMID:17623777 MGI:MGI:3723332 NCBI chr10:39,369,743...39,565,381
Ensembl chr10:39,368,855...39,565,381
JBrowse link
G Gja1 gap junction protein, alpha 1 ISO (PMID:18239136) AgBase PMID:18239136 NCBI chr10:56,377,300...56,390,419
Ensembl chr10:56,377,330...56,402,513
JBrowse link
G Gja5 gap junction protein, alpha 5 ISO (PMID:18239136) AgBase PMID:18239136 NCBI chr 3:97,032,402...97,053,634
Ensembl chr 3:96,904,693...97,077,416
JBrowse link
G Has1 hyaluronan synthase 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:17,833,691...17,855,589
Ensembl chr17:17,843,323...17,855,205
JBrowse link
G Has2 hyaluronan synthase 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr15:56,665,627...56,694,546
Ensembl chr15:56,665,627...56,694,539
JBrowse link
G Hyal1 hyaluronoglucosaminidase 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:107,576,950...107,581,699
Ensembl chr 9:107,576,927...107,581,710
JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 IMP (MGI:MGI:5430891|PMID:17563371) BHF-UCL PMID:17563371 MGI:MGI:5430891 NCBI chr 7:80,711,583...80,815,549
Ensembl chr 7:80,711,583...80,825,974
JBrowse link
G Itgb3 integrin beta 3 IMP (MGI:MGI:5462513|PMID:22984613) MGI PMID:22984613 MGI:MGI:5462513 NCBI chr11:104,608,000...104,670,476
Ensembl chr11:104,608,000...104,670,476
JBrowse link
G Ltbp1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:14708940 RGD:10412060 NCBI chr17:75,005,480...75,392,512
Ensembl chr17:75,005,568...75,392,512
JBrowse link
G Mars1 methionine-tRNA synthetase 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr10:127,296,221...127,311,786
Ensembl chr10:127,296,221...127,311,786
JBrowse link
G Mir125a microRNA 125a ISO RGD PMID:30156956 RGD:26884369 NCBI chr17:17,830,812...17,830,879
Ensembl chr17:17,830,812...17,830,879
JBrowse link
G Mtss2 MTSS I-BAR domain containing 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 8:110,721,108...110,741,401
Ensembl chr 8:110,721,476...110,741,400
JBrowse link
G Myc myelocytomatosis oncogene ISO RGD PMID:7524476 RGD:10059620 NCBI chr15:61,985,341...61,990,361
Ensembl chr15:61,985,391...61,990,374
JBrowse link
G Myh9 myosin, heavy polypeptide 9, non-muscle ISO RGD PMID:8888698 RGD:11533927 NCBI chr15:77,760,585...77,842,175
Ensembl chr15:77,760,587...77,842,175
JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 ISO RGD PMID:11882580 RGD:11556216 NCBI chr19:17,432,314...17,837,712
Ensembl chr19:17,432,319...17,837,632
JBrowse link
G Pdgfd platelet-derived growth factor, D polypeptide ISO RGD PMID:16039137 RGD:1581755 NCBI chr 9:6,168,363...6,534,284
Ensembl chr 9:6,168,584...6,378,850
JBrowse link
G Prkce protein kinase C, epsilon ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr17:86,167,785...86,657,919
Ensembl chr17:86,167,785...86,657,919
JBrowse link
G Ptn pleiotrophin ISO RGD PMID:16226713 RGD:9834996 NCBI chr 6:36,714,924...36,810,179
Ensembl chr 6:36,714,929...36,810,220
JBrowse link
G Rasa1 RAS p21 protein activator 1 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr13:85,214,699...85,289,486
Ensembl chr13:85,214,780...85,289,130
JBrowse link
G Rdx radixin ISO RGD PMID:8647942 RGD:8693616 NCBI chr 9:52,047,150...52,088,738
Ensembl chr 9:52,047,173...52,100,463
JBrowse link
G Serpine1 serine (or cysteine) peptidase inhibitor, clade E, member 1 ISO RGD PMID:10615432 RGD:8547892 NCBI chr 5:137,061,504...137,072,272
Ensembl chr 5:137,061,504...137,072,268
JBrowse link
G Snai2 snail family zinc finger 2 TAS (MGI:MGI:3808643|PMID:18663143) BHF-UCL PMID:18663143 MGI:MGI:3808643 NCBI chr16:14,705,852...14,709,395
Ensembl chr16:14,705,852...14,709,385
JBrowse link
G Src Rous sarcoma oncogene IDA (MGI:MGI:3723332|PMID:17623777) MGI PMID:17623777 MGI:MGI:3723332 NCBI chr 2:157,423,906...157,471,838
Ensembl chr 2:157,418,444...157,471,862
JBrowse link
G Syap1 synapse associated protein 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:162,856,843...162,888,462
Ensembl chr  X:162,857,057...162,888,447
JBrowse link
G Yes1 YES proto-oncogene 1, Src family tyrosine kinase IDA (MGI:MGI:3723332|PMID:17623777) MGI PMID:17623777 MGI:MGI:3723332 NCBI chr 5:32,611,171...32,687,066
Ensembl chr 5:32,611,171...32,687,057
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23366
    response to stimulus 10281
      response to endogenous stimulus 2027
        response to platelet-derived growth factor 36
          cellular response to platelet-derived growth factor stimulus 35
Path 2
Term Annotations click to browse term
  biological_process 23366
    response to stimulus 10281
      response to chemical 5344
        response to organic substance 3991
          response to growth factor 810
            response to platelet-derived growth factor 36
              cellular response to platelet-derived growth factor stimulus 35
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.