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ONTOLOGY REPORT - ANNOTATIONS


Term:histone H3-K9 trimethylation
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Accession:GO:0036124 term browser browse the term
Definition:The modification of histone H3 by addition of three methyl groups to lysine at position 9 of the histone.


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histone H3-K9 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arid4a AT-rich interaction domain 4A JBrowse link NW_004936495 2,690,231 2,762,213 RGD:9068941
G Arid4b AT-rich interaction domain 4B JBrowse link NW_004936484 17,116,304 17,257,640 RGD:9068941
G Bend3 BEN domain containing 3 JBrowse link NW_004936564 3,495,020 3,513,684 RGD:9068941
G Suv39h1 suppressor of variegation 3-9 homolog 1 JBrowse link NW_004936721 646,778 661,144 RGD:9068941
G Suv39h2 suppressor of variegation 3-9 homolog 2 JBrowse link NW_004936613 1,443,663 1,467,776 RGD:9068941
negative regulation of histone H3-K9 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kdm4b lysine demethylase 4B JBrowse link NW_004936588 2,908,970 3,005,625 RGD:9068941
G Kdm4c lysine demethylase 4C JBrowse link NW_004936539 1,198,105 1,580,078 RGD:9068941
G Kdm4d lysine demethylase 4D JBrowse link NW_004936674 53,200 73,042 RGD:9068941
G Pih1d1 PIH1 domain containing 1 JBrowse link NW_004936664 3,321,278 3,326,720 RGD:9068941
G Sirt1 sirtuin 1 JBrowse link NW_004936521 10,296,097 10,316,673 RGD:9068941
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link NW_004936619 1,276,239 1,308,945 RGD:9068941
positive regulation of histone H3-K9 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dmrtc2 DMRT like family C2 JBrowse link NW_004936706 582,541 586,735 RGD:9068941
G Lmna lamin A/C JBrowse link NW_004936580 5,374,208 5,395,442 RGD:9068941
G Mecp2 methyl-CpG binding protein 2 JBrowse link NW_004936809 902,938 967,771 RGD:9068941
G Znf304 zinc finger protein 304 JBrowse link NW_004936897 244,051 253,580 RGD:9068941
regulation of histone H3-K9 trimethylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atrx ATRX chromatin remodeler JBrowse link NW_004936683 2,496,307 2,718,539 RGD:9068941
G Znf274 zinc finger protein 274 JBrowse link NW_004936897 657,094 672,964 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 14835
    metabolic process 10258
      methylation 352
        macromolecule methylation 301
          protein methylation 178
            peptidyl-lysine methylation 125
              peptidyl-lysine trimethylation 47
                histone H3-K9 trimethylation 17
                  negative regulation of histone H3-K9 trimethylation 6
                  positive regulation of histone H3-K9 trimethylation 4
                  regulation of histone H3-K9 trimethylation + 12
Path 2
Term Annotations click to browse term
  biological_process 14835
    metabolic process 10258
      organic substance metabolic process 9758
        organonitrogen compound metabolic process 6211
          protein metabolic process 5354
            protein modification process 3893
              cellular protein modification process 3893
                protein alkylation 178
                  protein methylation 178
                    histone methylation 139
                      histone lysine methylation 112
                        histone H3-K9 methylation 38
                          histone H3-K9 trimethylation 17
                            negative regulation of histone H3-K9 trimethylation 6
                            positive regulation of histone H3-K9 trimethylation 4
                            regulation of histone H3-K9 trimethylation + 12
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.