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ONTOLOGY REPORT - ANNOTATIONS


Term:sperm flagellum
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Accession:GO:0036126 term browser browse the term
Definition:A microtubule-based flagellum (or cilium) that is part of a sperm, a mature male germ cell that develops from a spermatid.
Comment:Note that cilia and eukaryotic flagella are deemed to be equivalent. In this case community usage is always 'flagellum', hence the primary term name, but the cilium parentage is deliberate.
Synonyms:exact_synonym: sperm cilium;   sperm tail


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sperm flagellum term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABHD2 abhydrolase domain containing 2, acylglycerol lipase JBrowse link 15 86,987,070 87,095,823 RGD:9068941
G AK1 adenylate kinase 1 JBrowse link 9 127,657,338 127,678,245 RGD:9068941
G AK2 adenylate kinase 2 JBrowse link 1 33,480,074 33,508,697 RGD:9068941
G AK8 adenylate kinase 8 JBrowse link 9 132,473,492 132,625,313 RGD:9068941
G ATP1A1 ATPase Na+/K+ transporting subunit alpha 1 JBrowse link 1 121,212,161 121,232,876 RGD:9068941
G ATP1B1 ATPase Na+/K+ transporting subunit beta 1 JBrowse link 1 148,314,700 148,343,205 RGD:9068941
G ATP1B3 ATPase Na+/K+ transporting subunit beta 3 JBrowse link 3 146,500,493 146,550,164 RGD:9068941
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 JBrowse link 1 183,524,723 183,639,882 RGD:9068941
G CABCOCO1 ciliary associated calcium binding coiled-coil 1 JBrowse link 10 60,518,657 60,621,981 RGD:9068941
G CCDC181 coiled-coil domain containing 181 JBrowse link 1 148,599,382 148,632,247 RGD:9068941
G CCR6 C-C motif chemokine receptor 6 JBrowse link 6 170,069,689 170,084,779 RGD:9068941
G CFAP251 cilia and flagella associated protein 251 JBrowse link 12 122,888,236 122,972,582 RGD:9068941
G CFAP65 cilia and flagella associated protein 65 JBrowse link 2B 224,854,262 224,892,529 RGD:9068941
G CFAP70 cilia and flagella associated protein 70 JBrowse link 10 72,260,229 72,364,848 RGD:9068941
G CST11 cystatin 11 JBrowse link 20 23,736,631 23,739,084 RGD:9068941
G CUL3 cullin 3 JBrowse link 2B 230,289,195 230,373,537 RGD:9068941
G DCDC2C doublecortin domain containing 2C JBrowse link 2A 3,638,431 3,723,667 RGD:9068941
G DNAH1 dynein axonemal heavy chain 1 JBrowse link 3 53,491,822 53,572,393 RGD:9068941
G DNAH17 dynein axonemal heavy chain 17 JBrowse link 17 78,048,364 78,195,014 RGD:9068941
G DNAH2 dynein axonemal heavy chain 2 JBrowse link 17 7,737,604 7,853,930 RGD:9068941
G DNAH8 dynein axonemal heavy chain 8 JBrowse link 6 39,479,294 39,800,107 RGD:9068941
G DNAI2 dynein axonemal intermediate chain 2 JBrowse link 17 73,770,753 73,811,845 RGD:9068941
G DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 JBrowse link 11 72,330,907 72,350,025 RGD:9068941
G DNALI1 dynein axonemal light intermediate chain 1 JBrowse link 1 38,179,381 38,189,313 RGD:9068941
G DRD2 dopamine receptor D2 JBrowse link 11 112,132,703 112,168,583 RGD:9068941
G ENKUR enkurin, TRPC channel interacting protein JBrowse link 10 25,526,548 25,606,817 RGD:9068941
G FLACC1 flagellum associated containing coiled-coil domains 1 JBrowse link 2B 206,697,119 206,766,071 RGD:9068941
G GAS8 growth arrest specific 8 JBrowse link 16 90,441,096 90,469,533 RGD:9068941
G HSP90AA1 heat shock protein 90 alpha family class A member 1 JBrowse link 14 102,519,033 102,524,639 RGD:9068941
G IFT27 intraflagellar transport 27 JBrowse link 22 35,509,349 35,527,132 RGD:9068941
G IFT88 intraflagellar transport 88 JBrowse link 13 20,205,881 20,331,204 RGD:9068941
G IQCG IQ motif containing G JBrowse link 3 205,192,718 205,268,692 RGD:9068941
G LOC100988353 septin-4 JBrowse link 17 57,448,904 57,472,837 RGD:9068941
G LYZL4 lysozyme like 4 JBrowse link 3 42,565,535 42,579,033 RGD:9068941
G MET MET proto-oncogene, receptor tyrosine kinase JBrowse link 7 121,365,429 121,468,159 RGD:9068941
G MNS1 meiosis specific nuclear structural 1 JBrowse link 15 53,713,815 53,750,213 RGD:9068941
G MROH2B maestro heat like repeat family member 2B JBrowse link 5 74,359,683 74,432,447 RGD:9068941
G NME5 NME/NM23 family member 5 JBrowse link 5 139,628,678 139,651,789 RGD:9068941
G OAZ3 ornithine decarboxylase antizyme 3 JBrowse link 1 130,765,003 130,773,974 RGD:9068941
G ODF2 outer dense fiber of sperm tails 2 JBrowse link 9 128,245,049 128,291,206 RGD:9068941
G PRKACA protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 14,385,183 14,406,205 RGD:9068941
G QRICH2 glutamine rich 2 JBrowse link 17 75,774,464 75,790,954 RGD:9068941
G RAN RAN, member RAS oncogene family JBrowse link 12 132,694,498 132,699,668 RGD:9068941
G RNF38 ring finger protein 38 JBrowse link 9 36,985,427 37,134,188 RGD:9068941
G RPGR retinitis pigmentosa GTPase regulator JBrowse link X 38,426,895 38,485,140 RGD:9068941
G RSPH1 radial spoke head component 1 JBrowse link 21 42,098,212 42,121,610 RGD:9068941
G RSPH6A radial spoke head 6 homolog A JBrowse link 19 51,342,573 51,361,404 RGD:9068941
G SAXO1 stabilizer of axonemal microtubules 1 JBrowse link 9 19,234,977 19,346,886 RGD:9068941
G SLIRP SRA stem-loop interacting RNA binding protein JBrowse link 14 77,462,870 77,472,380 RGD:9068941
G SPACA9 sperm acrosome associated 9 JBrowse link 9 132,624,823 132,636,687 RGD:9068941
G SPAG16 sperm associated antigen 16 JBrowse link 2B 219,014,837 220,139,499 RGD:9068941
G SPATA18 spermatogenesis associated 18 JBrowse link 4 78,416,684 78,464,191 RGD:9068941
G SPEF2 sperm flagellar 2 JBrowse link 5 79,834,675 80,031,753 RGD:9068941
G TACR1 tachykinin receptor 1 JBrowse link 2A 76,614,478 76,771,018 RGD:9068941
G TACR2 tachykinin receptor 2 JBrowse link 10 68,403,637 68,415,819 RGD:9068941
G TCP11 t-complex 11 JBrowse link 6 35,776,683 35,799,480 RGD:9068941
G TCTE1 t-complex-associated-testis-expressed 1 JBrowse link 6 45,157,695 45,175,956 RGD:9068941
G TCTE3 t-complex-associated-testis-expressed 3 JBrowse link 6 172,850,077 172,861,575 RGD:9068941
G TCTEX1D4 Tctex1 domain containing 4 JBrowse link 1 45,475,939 45,477,485 RGD:9068941
G TEKT3 tektin 3 JBrowse link 17 40,961,623 41,000,108 RGD:9068941
G TEKT5 tektin 5 JBrowse link 16 10,785,384 10,858,712 RGD:9068941
G TPPP2 tubulin polymerization promoting protein family member 2 JBrowse link 14 19,921,223 19,929,695 RGD:9068941
G TSSK4 testis specific serine kinase 4 JBrowse link 14 23,104,197 23,108,151 RGD:9068941
G TTC29 tetratricopeptide repeat domain 29 JBrowse link 4 150,694,682 150,937,941 RGD:9068941
G TXNDC2 thioredoxin domain containing 2 JBrowse link 18 6,681,552 6,683,778 RGD:9068941
G TXNDC8 thioredoxin domain containing 8 JBrowse link 9 109,624,764 109,658,849 RGD:9068941
G WBP2NL WBP2 N-terminal like JBrowse link 22 40,974,715 41,008,296 RGD:9068941
outer dense fiber term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AK1 adenylate kinase 1 JBrowse link 9 127,657,338 127,678,245 RGD:9068941
G CTSH cathepsin H JBrowse link 15 76,853,433 76,876,976 RGD:9068941
G DDX6 DEAD-box helicase 6 JBrowse link 11 117,515,778 117,559,364 RGD:9068941
G FLACC1 flagellum associated containing coiled-coil domains 1 JBrowse link 2B 206,697,119 206,766,071 RGD:9068941
G ODF1 outer dense fiber of sperm tails 1 JBrowse link 8 101,366,611 101,376,030 RGD:9068941
G ODF2 outer dense fiber of sperm tails 2 JBrowse link 9 128,245,049 128,291,206 RGD:9068941
G ODF3 outer dense fiber of sperm tails 3 JBrowse link 11 236,782 240,280 RGD:9068941
G ODF4 outer dense fiber of sperm tails 4 JBrowse link 17 48,046,641 48,053,339 RGD:9068941
G RSPH1 radial spoke head component 1 JBrowse link 21 42,098,212 42,121,610 RGD:9068941
G TXNDC2 thioredoxin domain containing 2 JBrowse link 18 6,681,552 6,683,778 RGD:9068941
sperm annulus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DDX6 DEAD-box helicase 6 JBrowse link 11 117,515,778 117,559,364 RGD:9068941
G LOC100988353 septin-4 JBrowse link 17 57,448,904 57,472,837 RGD:9068941
G SEPTIN12 septin 12 JBrowse link 16 4,867,208 4,877,772 RGD:9068941
G SEPTIN2 septin 2 JBrowse link 2B 247,380,771 247,419,556 RGD:9068941
G SEPTIN6 septin 6 JBrowse link X 119,074,291 119,152,830 RGD:9068941
G SEPTIN7 septin 7 JBrowse link 7 36,662,157 36,767,643 RGD:9068941
sperm connecting piece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP4 A-kinase anchoring protein 4 JBrowse link X 50,109,391 50,119,651 RGD:9068941
G CAPZB capping actin protein of muscle Z-line subunit beta JBrowse link 1 19,343,400 19,489,072 RGD:9068941
G DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 JBrowse link 11 72,330,907 72,350,025 RGD:9068941
G FSIP2 fibrous sheath interacting protein 2 JBrowse link 2B 190,821,633 190,915,433 RGD:9068941
G GLIPR1L1 GLIPR1 like 1 JBrowse link 12 75,713,020 75,748,658 RGD:9068941
G PMFBP1 polyamine modulated factor 1 binding protein 1 JBrowse link 16 71,980,343 72,033,258 RGD:9068941
G PRKAR1A protein kinase cAMP-dependent type I regulatory subunit alpha JBrowse link 17 67,838,484 67,859,610 RGD:9068941
G SPATA6 spermatogenesis associated 6 JBrowse link 1 49,091,192 49,264,901 RGD:9068941
G SPATC1L spermatogenesis and centriole associated 1 like JBrowse link 21 45,759,213 45,781,421 RGD:9068941
G SUN5 Sad1 and UNC84 domain containing 5 JBrowse link 20 30,388,096 30,408,883 RGD:9068941
sperm end piece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP4 A-kinase anchoring protein 4 JBrowse link X 50,109,391 50,119,651 RGD:9068941
G CABYR calcium binding tyrosine phosphorylation regulated JBrowse link 18 21,014,584 21,037,082 RGD:9068941
G FSIP2 fibrous sheath interacting protein 2 JBrowse link 2B 190,821,633 190,915,433 RGD:9068941
sperm fibrous sheath term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP14 A-kinase anchoring protein 14 JBrowse link X 119,355,712 119,380,449 RGD:9068941
G AKAP3 A-kinase anchoring protein 3 JBrowse link 12 4,655,004 4,687,239 RGD:9068941
G AKAP4 A-kinase anchoring protein 4 JBrowse link X 50,109,391 50,119,651 RGD:9068941
G ALDOA aldolase, fructose-bisphosphate A JBrowse link 16 30,428,190 30,444,910 RGD:9068941
G CABYR calcium binding tyrosine phosphorylation regulated JBrowse link 18 21,014,584 21,037,082 RGD:9068941
G FLACC1 flagellum associated containing coiled-coil domains 1 JBrowse link 2B 206,697,119 206,766,071 RGD:9068941
G FSCB fibrous sheath CABYR binding protein JBrowse link 14 43,453,313 43,456,049 RGD:9068941
G GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic JBrowse link 19 41,216,758 41,228,750 RGD:9068941
G GSTM3 glutathione S-transferase mu 3 JBrowse link 1 127,956,485 127,960,583 RGD:9068941
G LDHA lactate dehydrogenase A JBrowse link 11 18,115,250 18,128,400 RGD:9068941
G NME8 NME/NM23 family member 8 JBrowse link 7 38,708,937 38,757,802 RGD:9068941
G PGK2 phosphoglycerate kinase 2 JBrowse link 6 50,615,916 50,617,599 RGD:9068941
G SPA17 sperm autoantigenic protein 17 JBrowse link 11 123,416,864 123,437,823 RGD:9068941
G TSGA10 testis specific 10 JBrowse link 2A 99,920,575 100,083,682 RGD:9068941
sperm midpiece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP3 A-kinase anchoring protein 3 JBrowse link 12 4,655,004 4,687,239 RGD:9068941
G AKAP4 A-kinase anchoring protein 4 JBrowse link X 50,109,391 50,119,651 RGD:9068941
G CCDC172 coiled-coil domain containing 172 JBrowse link 10 116,345,818 116,401,441 RGD:9068941
G CCR6 C-C motif chemokine receptor 6 JBrowse link 6 170,069,689 170,084,779 RGD:9068941
G CD52 CD52 molecule JBrowse link 1 26,647,260 26,649,876 RGD:9068941
G CD55 CD55 molecule (Cromer blood group) JBrowse link 1 187,201,195 187,240,350 RGD:9068941
G CFAP65 cilia and flagella associated protein 65 JBrowse link 2B 224,854,262 224,892,529 RGD:9068941
G CFAP69 cilia and flagella associated protein 69 JBrowse link 7 95,856,393 95,936,535 RGD:9068941
G DEFB1 defensin beta 1 JBrowse link 8 6,874,235 6,881,631 RGD:9068941
G FSIP2 fibrous sheath interacting protein 2 JBrowse link 2B 190,821,633 190,915,433 RGD:9068941
G GABARAP GABA type A receptor-associated protein JBrowse link 17 7,257,659 7,260,276 RGD:9068941
G GRK3 G protein-coupled receptor kinase 3 JBrowse link 22 24,353,530 24,516,416 RGD:9068941
G HYAL3 hyaluronidase 3 JBrowse link 3 51,456,173 51,462,815 RGD:9068941
G IFT172 intraflagellar transport 172 JBrowse link 2A 27,536,534 27,580,406 RGD:9068941
G IFT27 intraflagellar transport 27 JBrowse link 22 35,509,349 35,527,132 RGD:9068941
G IFT81 intraflagellar transport 81 JBrowse link 12 111,093,661 111,186,786 RGD:9068941
G LOC100968910 sodium/potassium-transporting ATPase subunit alpha-4 JBrowse link 1 139,426,556 139,462,393 RGD:9068941
G LOC100980711 angiotensin-converting enzyme JBrowse link 17 62,710,398 62,724,018 RGD:9068941
G LYZL6 lysozyme like 6 JBrowse link 17 21,147,928 21,157,112 RGD:9068941
G MROH2B maestro heat like repeat family member 2B JBrowse link 5 74,359,683 74,432,447 RGD:9068941
G PACRG parkin coregulated JBrowse link 6 165,678,258 166,258,530 RGD:9068941
G PRKACA protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 14,385,183 14,406,205 RGD:9068941
G PTCHD3 patched domain containing 3 JBrowse link 10 27,894,716 27,910,578 RGD:9068941
G SLC26A3 solute carrier family 26 member 3 JBrowse link 7 112,470,041 112,507,671 RGD:9068941
G SLC26A6 solute carrier family 26 member 6 JBrowse link 3 49,629,237 49,639,033 RGD:9068941
G SLC9A3R1 SLC9A3 regulator 1 JBrowse link 17 74,250,406 74,271,234 RGD:9068941
G SPEF2 sperm flagellar 2 JBrowse link 5 79,834,675 80,031,753 RGD:9068941
G SQSTM1 sequestosome 1 JBrowse link 5 182,271,070 182,299,093 RGD:9068941
G TACR1 tachykinin receptor 1 JBrowse link 2A 76,614,478 76,771,018 RGD:9068941
G TACR2 tachykinin receptor 2 JBrowse link 10 68,403,637 68,415,819 RGD:9068941
G TACR3 tachykinin receptor 3 JBrowse link 4 106,644,943 106,776,172 RGD:9068941
G TCP11 t-complex 11 JBrowse link 6 35,776,683 35,799,480 RGD:9068941
G VPS13A vacuolar protein sorting 13 homolog A JBrowse link 9 76,032,292 76,275,155 RGD:9068941
sperm mitochondrial sheath term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AK2 adenylate kinase 2 JBrowse link 1 33,480,074 33,508,697 RGD:9068941
G HSP90AA1 heat shock protein 90 alpha family class A member 1 JBrowse link 14 102,519,033 102,524,639 RGD:9068941
sperm principal piece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP3 A-kinase anchoring protein 3 JBrowse link 12 4,655,004 4,687,239 RGD:9068941
G AKAP4 A-kinase anchoring protein 4 JBrowse link X 50,109,391 50,119,651 RGD:9068941
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 JBrowse link 1 183,524,723 183,639,882 RGD:9068941
G CABYR calcium binding tyrosine phosphorylation regulated JBrowse link 18 21,014,584 21,037,082 RGD:9068941
G CATSPER4 cation channel sperm associated 4 JBrowse link 1 26,518,287 26,531,000 RGD:9068941
G CATSPERD cation channel sperm associated auxiliary subunit delta JBrowse link 19 5,671,346 5,722,150 RGD:9068941
G CATSPERE catsper channel auxiliary subunit epsilon JBrowse link 1 225,454,034 225,613,831 RGD:9068941
G CATSPERZ catsper channel auxiliary subunit zeta JBrowse link 11 62,994,459 63,006,546 RGD:9068941
G CCR6 C-C motif chemokine receptor 6 JBrowse link 6 170,069,689 170,084,779 RGD:9068941
G DNAH8 dynein axonemal heavy chain 8 JBrowse link 6 39,479,294 39,800,107 RGD:9068941
G EFCAB2 EF-hand calcium binding domain 2 JBrowse link 1 225,948,112 226,105,544 RGD:9068941
G EFCAB9 EF-hand calcium binding domain 9 JBrowse link 5 174,461,056 174,470,489 RGD:9068941
G ENKUR enkurin, TRPC channel interacting protein JBrowse link 10 25,526,548 25,606,817 RGD:9068941
G ENO4 enolase 4 JBrowse link 10 116,861,381 116,893,792 RGD:9068941
G FSCB fibrous sheath CABYR binding protein JBrowse link 14 43,453,313 43,456,049 RGD:9068941
G FSIP2 fibrous sheath interacting protein 2 JBrowse link 2B 190,821,633 190,915,433 RGD:9068941
G GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic JBrowse link 19 41,216,758 41,228,750 RGD:9068941
G HK1 hexokinase 1 JBrowse link 10 68,289,288 68,401,045 RGD:9068941
G IFT172 intraflagellar transport 172 JBrowse link 2A 27,536,534 27,580,406 RGD:9068941
G IFT27 intraflagellar transport 27 JBrowse link 22 35,509,349 35,527,132 RGD:9068941
G IFT81 intraflagellar transport 81 JBrowse link 12 111,093,661 111,186,786 RGD:9068941
G KIF2A kinesin family member 2A JBrowse link 5 53,251,415 53,332,218 RGD:9068941
G NME8 NME/NM23 family member 8 JBrowse link 7 38,708,937 38,757,802 RGD:9068941
G PFKM phosphofructokinase, muscle JBrowse link 12 41,459,346 41,500,101 RGD:9068941
G PGAM4 phosphoglycerate mutase family member 4 JBrowse link X 77,260,981 77,262,333 RGD:9068941
G ROPN1 rhophilin associated tail protein 1 JBrowse link 3 127,973,536 127,996,694 RGD:9068941
G SCNN1A sodium channel epithelial 1 alpha subunit JBrowse link 12 6,392,354 6,423,118 RGD:9068941
G SLC9B1 solute carrier family 9 member B1 JBrowse link 4 105,987,123 106,100,119 RGD:9068941
G SLC9B2 solute carrier family 9 member B2 JBrowse link 4 106,100,229 106,155,749 RGD:9068941
G SPA17 sperm autoantigenic protein 17 JBrowse link 11 123,416,864 123,437,823 RGD:9068941
G SPAG6 sperm associated antigen 6 JBrowse link 10 22,877,396 22,949,504 RGD:9068941
G TSGA10 testis specific 10 JBrowse link 2A 99,920,575 100,083,682 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12477
    cellular anatomical entity 12301
      organelle 9587
        cilium 579
          motile cilium 188
            9+2 motile cilium 145
              sperm flagellum 134
                outer dense fiber 10
                sperm annulus 6
                sperm connecting piece 10
                sperm end piece 3
                sperm fibrous sheath 14
                sperm midpiece 33
                sperm mitochondrial sheath 2
                sperm principal piece 32
Path 2
Term Annotations click to browse term
  cellular_component 12477
    cellular anatomical entity 12301
      cell projection 2064
        plasma membrane bounded cell projection 2036
          cilium 579
            motile cilium 188
              9+2 motile cilium 145
                sperm flagellum 134
                  outer dense fiber 10
                  sperm annulus 6
                  sperm connecting piece 10
                  sperm end piece 3
                  sperm fibrous sheath 14
                  sperm midpiece 33
                  sperm mitochondrial sheath 2
                  sperm principal piece 32
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.