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ONTOLOGY REPORT - ANNOTATIONS


Term:sperm flagellum
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Accession:GO:0036126 term browser browse the term
Definition:A microtubule-based flagellum (or cilium) that is part of a sperm, a mature male germ cell that develops from a spermatid.
Comment:Note that cilia and eukaryotic flagella are deemed to be equivalent. In this case community usage is always 'flagellum', hence the primary term name, but the cilium parentage is deliberate.
Synonyms:exact_synonym: sperm cilium;   sperm tail


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sperm flagellum term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abhd2 abhydrolase domain containing 2, acylglycerol lipase JBrowse link NW_004955416 15,878,972 15,983,322 RGD:9068941
G Ak1 adenylate kinase 1 JBrowse link NW_004955419 799,415 807,138 RGD:9068941
G Ak2 adenylate kinase 2 JBrowse link NW_004955452 11,254,853 11,275,587 RGD:9068941
G Ak8 adenylate kinase 8 JBrowse link NW_004955513 2,069,187 2,185,469 RGD:9068941
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 JBrowse link NW_004955435 19,537,224 19,563,631 RGD:9068941
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 JBrowse link NW_004955462 8,072,519 8,095,311 RGD:9068941
G Atp1b3 ATPase Na+/K+ transporting subunit beta 3 JBrowse link NW_004955508 3,848,745 3,875,992 RGD:9068941
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 JBrowse link NW_004955406 39,552,034 39,645,694 RGD:9068941
G Cabcoco1 ciliary associated calcium binding coiled-coil 1 JBrowse link NW_004955425 15,007,833 15,115,084 RGD:9068941
G Catsper2 cation channel sperm associated 2 JBrowse link NW_004955409 3,925,106 3,940,566 RGD:9068941
G Ccdc181 coiled-coil domain containing 181 JBrowse link NW_004955462 7,820,176 7,838,931 RGD:9068941
G Ccr6 C-C motif chemokine receptor 6 JBrowse link NW_004955439 14,921,524 14,949,493 RGD:9068941
G Cfap251 cilia and flagella associated protein 251 JBrowse link NW_004955482 6,508,563 6,553,561 RGD:9068941
G Cfap65 cilia and flagella associated protein 65 JBrowse link NW_004955453 14,394,853 14,431,774 RGD:9068941
G Cfap70 cilia and flagella associated protein 70 JBrowse link NW_004955437 18,424,568 18,480,327 RGD:9068941
G Cst11 cystatin 11 JBrowse link NW_004955415 30,445,556 30,453,439 RGD:9068941
G Cul3 cullin 3 JBrowse link NW_004955453 9,546,554 9,629,976 RGD:9068941
G Dcdc2c doublecortin domain containing 2C JBrowse link NW_004955487 3,698,708 3,756,669 RGD:9068941
G Dnah1 dynein axonemal heavy chain 1 JBrowse link NW_004955430 2,323,928 2,391,470 RGD:9068941
G Dnah17 dynein axonemal heavy chain 17 JBrowse link NW_004955506 4,042,768 4,161,022 RGD:9068941
G Dnah2 dynein axonemal heavy chain 2 JBrowse link NW_004955467 9,107,089 9,210,941 RGD:9068941
G Dnah8 dynein axonemal heavy chain 8 JBrowse link NW_004955437 4,441,776 4,722,261 RGD:9068941
G Dnai2 dynein axonemal intermediate chain 2 JBrowse link NW_004955553 1,188,279 1,212,053 RGD:9068941
G Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 JBrowse link NW_004955414 17,599,549 17,613,724 RGD:9068941
G Dnali1 dynein axonemal light intermediate chain 1 JBrowse link NW_004955452 15,367,443 15,375,001 RGD:9068941
G Drd2 dopamine receptor D2 JBrowse link NW_004955412 15,054,255 15,114,558 RGD:9068941
G Enkur enkurin, TRPC channel interacting protein JBrowse link NW_004955429 4,182,507 4,203,275 RGD:9068941
G Flacc1 flagellum associated containing coiled-coil domains 1 JBrowse link NW_004955403 264,969 321,370 RGD:9068941
G Gas8 growth arrest specific 8 JBrowse link NW_004955541 3,477,067 3,494,991 RGD:9068941
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 JBrowse link NW_004955538 1,469,544 1,475,010 RGD:9068941
G Ift27 intraflagellar transport 27 JBrowse link NW_004955413 23,295,549 23,310,824 RGD:9068941
G Ift88 intraflagellar transport 88 JBrowse link NW_004955497 1,338,959 1,454,788 RGD:9068941
G Iqcg IQ motif containing G JBrowse link NW_004955420 11,960,778 11,997,807 RGD:9068941
G Lyzl4 lysozyme like 4 JBrowse link NW_004955420 28,333,984 28,344,180 RGD:9068941
G Met MET proto-oncogene, receptor tyrosine kinase JBrowse link NW_004955432 22,440,671 22,519,592 RGD:9068941
G Mns1 meiosis specific nuclear structural 1 JBrowse link NW_004955450 17,819,812 17,852,157 RGD:9068941
G Mroh2b maestro heat like repeat family member 2B JBrowse link NW_004955426 25,245,920 25,311,757 RGD:9068941
G Nme5 NME/NM23 family member 5 JBrowse link NW_004955418 2,282,721 2,301,997 RGD:9068941
G Oaz3 ornithine decarboxylase antizyme 3 JBrowse link NW_004955589 654,088 658,003 RGD:9068941
G Odf2 outer dense fiber of sperm tails 2 JBrowse link NW_004955570 932,002 966,602 RGD:9068941
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link NW_004955415 32,794,172 32,807,944 RGD:9068941
G Qrich2 glutamine rich 2 JBrowse link NW_004955506 5,990,070 6,015,808 RGD:9068941
G Ran RAN, member RAS oncogene family JBrowse link NW_004955482 1,222,944 1,223,891 RGD:9068941
G Rnf38 ring finger protein 38 JBrowse link NW_004955419 29,903,917 30,063,705 RGD:9068941
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link NW_004955601 398,772 453,271 RGD:9068941
G Rsph1 radial spoke head component 1 JBrowse link NW_004955407 39,266,888 39,284,972 RGD:9068941
G Rsph6a radial spoke head 6 homolog A JBrowse link NW_004955574 247,728 264,238 RGD:9068941
G Saxo1 stabilizer of axonemal microtubules 1 JBrowse link NW_004955434 21,414,937 21,454,901 RGD:9068941
G Septin4 septin 4 JBrowse link NW_004955451 4,505,318 4,530,387 RGD:9068941
G Slirp SRA stem-loop interacting RNA binding protein JBrowse link NW_004955438 1,556,462 1,561,561 RGD:9068941
G Spaca9 sperm acrosome associated 9 JBrowse link NW_004955513 2,184,878 2,196,367 RGD:9068941
G Spag16 sperm associated antigen 16 JBrowse link NW_004955457 1,543,946 2,492,686 RGD:9068941
G Spata18 spermatogenesis associated 18 JBrowse link NW_004955447 18,401,881 18,437,878 RGD:9068941
G Spef2 sperm flagellar 2 JBrowse link NW_004955426 20,587,312 20,747,034 RGD:9068941
G Tacr1 tachykinin receptor 1 JBrowse link NW_004955424 10,614,340 10,761,872 RGD:9068941
G Tacr2 tachykinin receptor 2 JBrowse link NW_004955437 21,719,246 21,731,963 RGD:9068941
G Tcp11 t-complex 11 JBrowse link NW_004955437 3,087,733 3,113,771 RGD:9068941
G Tcte1 t-complex-associated-testis-expressed 1 JBrowse link NW_004955437 9,900,295 9,913,955 RGD:9068941
G Tcte3 t-complex-associated-testis-expressed 3 JBrowse link NW_004955411 3,866,312 3,903,862 RGD:9068941
G Tctex1d4 Tctex1 domain containing 4 JBrowse link NW_004955464 13,417,735 13,419,646 RGD:9068941
G Tekt3 tektin 3 JBrowse link NW_004955467 2,347,996 2,381,346 RGD:9068941
G Tekt5 tektin 5 JBrowse link NW_004955442 7,740,611 7,778,130 RGD:9068941
G Tppp2 tubulin polymerization promoting protein family member 2 JBrowse link NW_004955550 1,779,405 1,785,385 RGD:9068941
G Tssk4 testis specific serine kinase 4 JBrowse link NW_004955409 36,190,182 36,191,801 RGD:9068941
G Ttc29 tetratricopeptide repeat domain 29 JBrowse link NW_004955428 2,378,498 2,571,246 RGD:9068941
G Txndc2 thioredoxin domain containing 2 JBrowse link NW_004955402 2,339,130 2,341,283 RGD:9068941
G Wbp2nl WBP2 N-terminal like JBrowse link NW_004955413 27,402,614 27,442,106 RGD:9068941
outer dense fiber term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak1 adenylate kinase 1 JBrowse link NW_004955419 799,415 807,138 RGD:9068941
G Ctsh cathepsin H JBrowse link NW_004955533 39,237 54,881 RGD:9068941
G Ddx6 DEAD-box helicase 6 JBrowse link NW_004955412 19,854,785 19,889,422 RGD:9068941
G Flacc1 flagellum associated containing coiled-coil domains 1 JBrowse link NW_004955403 264,969 321,370 RGD:9068941
G Odf1 outer dense fiber of sperm tails 1 JBrowse link NW_004955417 27,145,542 27,150,910 RGD:9068941
G Odf2 outer dense fiber of sperm tails 2 JBrowse link NW_004955570 932,002 966,602 RGD:9068941
G Odf3 outer dense fiber of sperm tails 3 JBrowse link NW_004955476 11,837,758 11,841,059 RGD:9068941
G Odf4 outer dense fiber of sperm tails 4 JBrowse link NW_004955467 8,556,722 8,570,624 RGD:9068941
G Rsph1 radial spoke head component 1 JBrowse link NW_004955407 39,266,888 39,284,972 RGD:9068941
G Txndc2 thioredoxin domain containing 2 JBrowse link NW_004955402 2,339,130 2,341,283 RGD:9068941
sperm annulus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddx6 DEAD-box helicase 6 JBrowse link NW_004955412 19,854,785 19,889,422 RGD:9068941
G Septin12 septin 12 JBrowse link NW_004955442 12,704,546 12,717,905 RGD:9068941
G Septin2 septin 2 JBrowse link NW_004955542 401,081 444,304 RGD:9068941
G Septin4 septin 4 JBrowse link NW_004955451 4,505,318 4,530,387 RGD:9068941
G Septin6 septin 6 JBrowse link NW_004955534 306,691 381,799 RGD:9068941
G Septin7 septin 7 JBrowse link NW_004955460 7,287,452 7,374,747 RGD:9068941
sperm connecting piece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap4 A-kinase anchoring protein 4 JBrowse link NW_004955543 1,358,086 1,367,838 RGD:9068941
G Capzb capping actin protein of muscle Z-line subunit beta JBrowse link NW_004955452 34,454 168,514 RGD:9068941
G Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 JBrowse link NW_004955414 17,599,549 17,613,724 RGD:9068941
G Fsip2 fibrous sheath interacting protein 2 JBrowse link NW_004955403 12,261,233 12,334,754 RGD:9068941
G Glipr1l1 GLIPR1 like 1 JBrowse link NW_004955405 14,710,789 14,755,709 RGD:9068941
G Pmfbp1 polyamine modulated factor 1 binding protein 1 JBrowse link NW_004955484 4,776,358 4,822,312 RGD:9068941
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha JBrowse link NW_004955478 4,241,283 4,262,119 RGD:9068941
G Spata6 spermatogenesis associated 6 JBrowse link NW_004955464 10,225,661 10,340,528 RGD:9068941
G Spatc1l spermatogenesis and centriole associated 1 like JBrowse link NW_004955407 42,621,167 42,629,350 RGD:9068941
G Sun5 Sad1 and UNC84 domain containing 5 JBrowse link NW_004955422 28,252,245 28,273,457 RGD:9068941
sperm end piece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap4 A-kinase anchoring protein 4 JBrowse link NW_004955543 1,358,086 1,367,838 RGD:9068941
G Cabyr calcium binding tyrosine phosphorylation regulated JBrowse link NW_004955402 12,508,524 12,529,230 RGD:9068941
G Fsip2 fibrous sheath interacting protein 2 JBrowse link NW_004955403 12,261,233 12,334,754 RGD:9068941
sperm fibrous sheath term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap14 A-kinase anchoring protein 14 JBrowse link NW_004955534 120,603 137,227 RGD:9068941
G Akap3 A-kinase anchoring protein 3 JBrowse link NW_004955413 2,411,618 2,432,658 RGD:9068941
G Akap4 A-kinase anchoring protein 4 JBrowse link NW_004955543 1,358,086 1,367,838 RGD:9068941
G Aldoa aldolase, fructose-bisphosphate A JBrowse link NW_004955493 6,904,931 6,910,682 RGD:9068941
G Cabyr calcium binding tyrosine phosphorylation regulated JBrowse link NW_004955402 12,508,524 12,529,230 RGD:9068941
G Flacc1 flagellum associated containing coiled-coil domains 1 JBrowse link NW_004955403 264,969 321,370 RGD:9068941
G Fscb fibrous sheath CABYR binding protein JBrowse link NW_004955409 17,433,213 17,435,957 RGD:9068941
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic JBrowse link NW_004955468 4,757,080 4,773,675 RGD:9068941
G Gstm3 glutathione S-transferase mu 3 JBrowse link NW_004955435 13,253,947 13,256,965 RGD:9068941
G Ldha lactate dehydrogenase A JBrowse link NW_004955414 33,087,745 33,100,846 RGD:9068941
G Nme8 NME/NM23 family member 8 JBrowse link NW_004955460 5,672,768 5,718,707 RGD:9068941
G Pgk2 phosphoglycerate kinase 2 JBrowse link NW_004955411 8,216,432 8,218,065 RGD:9068941
G Spa17 sperm autoantigenic protein 17 JBrowse link NW_004955412 25,741,369 25,753,681 RGD:9068941
G Tsga10 testis specific 10 JBrowse link NW_004955470 5,376,749 5,471,904 RGD:9068941
sperm midpiece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap3 A-kinase anchoring protein 3 JBrowse link NW_004955413 2,411,618 2,432,658 RGD:9068941
G Akap4 A-kinase anchoring protein 4 JBrowse link NW_004955543 1,358,086 1,367,838 RGD:9068941
G Ccdc172 coiled-coil domain containing 172 JBrowse link NW_004955431 21,099,475 21,193,932 RGD:9068941
G Ccr6 C-C motif chemokine receptor 6 JBrowse link NW_004955439 14,921,524 14,949,493 RGD:9068941
G Cd55 CD55 molecule (Cromer blood group) JBrowse link NW_004955406 42,773,368 42,796,205 RGD:9068941
G Cfap65 cilia and flagella associated protein 65 JBrowse link NW_004955453 14,394,853 14,431,774 RGD:9068941
G Cfap69 cilia and flagella associated protein 69 JBrowse link NW_004955432 7,501,908 7,569,799 RGD:9068941
G Fsip2 fibrous sheath interacting protein 2 JBrowse link NW_004955403 12,261,233 12,334,754 RGD:9068941
G Gabarap GABA type A receptor-associated protein JBrowse link NW_004955467 9,667,938 9,670,067 RGD:9068941
G Grk3 G protein-coupled receptor kinase 3 JBrowse link NW_004955442 19,640,145 19,785,803 RGD:9068941
G Hyal3 hyaluronidase 3 JBrowse link NW_004955532 2,107,019 2,112,356 RGD:9068941
G Ift172 intraflagellar transport 172 JBrowse link NW_004955469 9,418,599 9,455,026 RGD:9068941
G Ift27 intraflagellar transport 27 JBrowse link NW_004955413 23,295,549 23,310,824 RGD:9068941
G Ift81 intraflagellar transport 81 JBrowse link NW_004955482 7,114,639 7,182,378 RGD:9068941
G LOC102004444 beta-defensin 1-like JBrowse link NW_004955403 53,643,328 53,644,361 RGD:9068941
G Lyzl6 lysozyme like 6 JBrowse link NW_004955481 225,132 273,565 RGD:9068941
G Mroh2b maestro heat like repeat family member 2B JBrowse link NW_004955426 25,245,920 25,311,757 RGD:9068941
G Pacrg parkin coregulated JBrowse link NW_004955439 18,152,719 18,664,026 RGD:9068941
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link NW_004955415 32,794,172 32,807,944 RGD:9068941
G Ptchd3 patched domain containing 3 JBrowse link NW_004955476 11,870,822 11,895,903 RGD:9068941
G Rabl2b RAB, member of RAS oncogene family like 2B JBrowse link NW_004955413 33,738,999 33,756,374 RGD:9068941
G Slc26a3 solute carrier family 26 member 3 JBrowse link NW_004955410 12,102,356 12,128,620 RGD:9068941
G Slc26a6 solute carrier family 26 member 6 JBrowse link NW_004955532 713,725 723,190 RGD:9068941
G Slc9a3r1 SLC9A3 regulator 1 JBrowse link NW_004955553 1,639,267 1,656,850 RGD:9068941
G Spef2 sperm flagellar 2 JBrowse link NW_004955426 20,587,312 20,747,034 RGD:9068941
G Sqstm1 sequestosome 1 JBrowse link NW_004955408 757,426 764,989 RGD:9068941
G Tacr1 tachykinin receptor 1 JBrowse link NW_004955424 10,614,340 10,761,872 RGD:9068941
G Tacr2 tachykinin receptor 2 JBrowse link NW_004955437 21,719,246 21,731,963 RGD:9068941
G Tacr3 tachykinin receptor 3 JBrowse link NW_004955496 5,152,134 5,222,565 RGD:9068941
G Tcp11 t-complex 11 JBrowse link NW_004955437 3,087,733 3,113,771 RGD:9068941
G Vps13a vacuolar protein sorting 13 homolog A JBrowse link NW_004955512 2,037,803 2,267,197 RGD:9068941
sperm mitochondrial sheath term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak2 adenylate kinase 2 JBrowse link NW_004955452 11,254,853 11,275,587 RGD:9068941
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 JBrowse link NW_004955538 1,469,544 1,475,010 RGD:9068941
sperm principal piece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap3 A-kinase anchoring protein 3 JBrowse link NW_004955413 2,411,618 2,432,658 RGD:9068941
G Akap4 A-kinase anchoring protein 4 JBrowse link NW_004955543 1,358,086 1,367,838 RGD:9068941
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 JBrowse link NW_004955406 39,552,034 39,645,694 RGD:9068941
G Cabyr calcium binding tyrosine phosphorylation regulated JBrowse link NW_004955402 12,508,524 12,529,230 RGD:9068941
G Catsper4 cation channel sperm associated 4 JBrowse link NW_004955439 21,098,751 21,111,906 RGD:9068941
G Catsperd cation channel sperm associated auxiliary subunit delta JBrowse link NW_004955495 3,663,878 3,711,595 RGD:9068941
G Catspere catsper channel auxiliary subunit epsilon JBrowse link NW_004955406 7,716,831 7,861,390 RGD:9068941
G Catsperz catsper channel auxiliary subunit zeta JBrowse link NW_004955422 20,777,488 20,780,765 RGD:9068941
G Ccr6 C-C motif chemokine receptor 6 JBrowse link NW_004955439 14,921,524 14,949,493 RGD:9068941
G Dnah8 dynein axonemal heavy chain 8 JBrowse link NW_004955437 4,441,776 4,722,261 RGD:9068941
G Efcab2 EF-hand calcium binding domain 2 JBrowse link NW_004955406 8,115,813 8,239,352 RGD:9068941
G Efcab9 EF-hand calcium binding domain 9 JBrowse link NW_004955408 24,987,401 24,993,284 RGD:9068941
G Enkur enkurin, TRPC channel interacting protein JBrowse link NW_004955429 4,182,507 4,203,275 RGD:9068941
G Eno4 enolase 4 JBrowse link NW_004955431 21,625,808 21,650,282 RGD:9068941
G Fscb fibrous sheath CABYR binding protein JBrowse link NW_004955409 17,433,213 17,435,957 RGD:9068941
G Fsip2 fibrous sheath interacting protein 2 JBrowse link NW_004955403 12,261,233 12,334,754 RGD:9068941
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic JBrowse link NW_004955468 4,757,080 4,773,675 RGD:9068941
G Hk1 hexokinase 1 JBrowse link NW_004955437 21,733,314 21,824,303 RGD:9068941
G Ift172 intraflagellar transport 172 JBrowse link NW_004955469 9,418,599 9,455,026 RGD:9068941
G Ift27 intraflagellar transport 27 JBrowse link NW_004955413 23,295,549 23,310,824 RGD:9068941
G Ift81 intraflagellar transport 81 JBrowse link NW_004955482 7,114,639 7,182,378 RGD:9068941
G Kif2a kinesin family member 2A JBrowse link NW_004955446 6,244,547 6,279,080 RGD:9068941
G Nme8 NME/NM23 family member 8 JBrowse link NW_004955460 5,672,768 5,718,707 RGD:9068941
G Pfkm phosphofructokinase, muscle JBrowse link NW_004955500 6,979,169 7,020,375 RGD:9068941
G Ropn1 rhophilin associated tail protein 1 JBrowse link NW_004955427 23,104,178 23,140,559 RGD:9068941
G Scnn1a sodium channel epithelial 1 alpha subunit JBrowse link NW_004955413 4,000,083 4,023,596 RGD:9068941
G Slc9b1 solute carrier family 9 member B1 JBrowse link NW_004955496 5,586,836 5,637,550 RGD:9068941
G Slc9b2 solute carrier family 9 member B2 JBrowse link NW_004955496 5,532,113 5,587,801 RGD:9068941
G Spa17 sperm autoantigenic protein 17 JBrowse link NW_004955412 25,741,369 25,753,681 RGD:9068941
G Spag6 sperm associated antigen 6 JBrowse link NW_004955429 625,601 662,804 RGD:9068941
G Tsga10 testis specific 10 JBrowse link NW_004955470 5,376,749 5,471,904 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 11975
    cellular anatomical entity 11807
      organelle 9272
        cilium 567
          motile cilium 183
            9+2 motile cilium 142
              sperm flagellum 131
                outer dense fiber 10
                sperm annulus 6
                sperm connecting piece 10
                sperm end piece 3
                sperm fibrous sheath 14
                sperm midpiece 31
                sperm mitochondrial sheath 2
                sperm principal piece 31
Path 2
Term Annotations click to browse term
  cellular_component 11975
    cellular anatomical entity 11807
      cell projection 2019
        plasma membrane bounded cell projection 1992
          cilium 567
            motile cilium 183
              9+2 motile cilium 142
                sperm flagellum 131
                  outer dense fiber 10
                  sperm annulus 6
                  sperm connecting piece 10
                  sperm end piece 3
                  sperm fibrous sheath 14
                  sperm midpiece 31
                  sperm mitochondrial sheath 2
                  sperm principal piece 31
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.