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ONTOLOGY REPORT - ANNOTATIONS


Term:sperm flagellum
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Accession:GO:0036126 term browser browse the term
Definition:A microtubule-based flagellum (or cilium) that is part of a sperm, a mature male germ cell that develops from a spermatid.
Comment:Note that cilia and eukaryotic flagella are deemed to be equivalent. In this case community usage is always 'flagellum', hence the primary term name, but the cilium parentage is deliberate.
Synonyms:exact_synonym: sperm cilium;   sperm tail


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sperm flagellum term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABHD2 abhydrolase domain containing 2, acylglycerol lipase JBrowse link 3 52,151,500 52,255,024 RGD:13508589
G AK1 adenylate kinase 1 JBrowse link 9 55,539,179 55,548,132 RGD:9068941
G AK2 adenylate kinase 2 JBrowse link 2 68,342,769 68,371,769 RGD:9068941
G AK8 adenylate kinase 8 JBrowse link 9 51,470,688 51,598,787 RGD:13508589
G ATP1A1 ATPase Na+/K+ transporting subunit alpha 1 JBrowse link 17 53,828,482 53,847,043 RGD:9068941
G ATP1B1 ATPase Na+/K+ transporting subunit beta 1 JBrowse link 7 29,464,132 29,487,124 RGD:13508589
G ATP1B3 ATPase Na+/K+ transporting subunit beta 3 JBrowse link 23 37,684,507 37,727,535 RGD:13508589
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 JBrowse link 38 321,246 420,262 RGD:13508589
G CABCOCO1 ciliary associated calcium binding coiled-coil 1 JBrowse link 4 13,687,468 13,804,773 RGD:9068941
G CATSPER2 cation channel sperm associated 2 JBrowse link 30 10,471,798 10,487,948 RGD:9068941
G CCDC181 coiled-coil domain containing 181 JBrowse link 7 29,136,183 29,173,753 RGD:13508589
G CCR6 C-C motif chemokine receptor 6 JBrowse link 1 54,932,798 54,960,646 RGD:9068941
G CFAP251 cilia and flagella associated protein 251 JBrowse link 26 7,308,893 7,375,133 RGD:13508589
G CFAP65 cilia and flagella associated protein 65 JBrowse link 37 25,569,302 25,601,943 RGD:9068941
G CFAP70 cilia and flagella associated protein 70 JBrowse link 4 23,830,335 23,926,922 RGD:13508589
G CST11 cystatin 11 JBrowse link 24 181,410 184,213 RGD:13508589
G CUL3 cullin 3 JBrowse link 25 37,730,903 37,819,851 RGD:13508589
G DCDC2C doublecortin domain containing 2C JBrowse link 17 2,216,402 2,310,398 RGD:13508589
G DNAH1 dynein axonemal heavy chain 1 JBrowse link 20 37,364,836 37,441,486 RGD:13508589
G DNAH17 dynein axonemal heavy chain 17 JBrowse link 9 2,713,236 2,809,101 RGD:13508589
G DNAH2 dynein axonemal heavy chain 2 JBrowse link 5 32,600,902 32,688,560 RGD:13508589
G DNAH8 dynein axonemal heavy chain 8 JBrowse link 12 7,617,638 7,972,842 RGD:9068941
G DNAI2 dynein axonemal intermediate chain 2 JBrowse link 9 6,085,021 6,114,187 RGD:13508589
G DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 JBrowse link 21 24,314,242 24,326,605 RGD:9068941
G DNALI1 dynein axonemal light intermediate chain 1 JBrowse link 15 4,916,747 4,922,893 RGD:9068941
G DRD2 dopamine receptor D2 JBrowse link 5 19,732,842 19,795,241 RGD:9068941
G ENKUR enkurin, TRPC channel interacting protein JBrowse link 2 8,497,252 8,522,302 RGD:9068941
G FLACC1 flagellum associated containing coiled-coil domains 1 JBrowse link 37 10,404,512 10,438,102 RGD:9068941
G GAS8 growth arrest specific 8 JBrowse link 5 63,589,196 63,609,014 RGD:13508589
G HSP90AA1 heat shock protein 90 alpha family class A member 1 JBrowse link 8 70,091,203 70,096,107 RGD:9068941
G IFT27 intraflagellar transport 27 JBrowse link 10 27,688,742 27,707,343 RGD:9068941
G IFT88 intraflagellar transport 88 JBrowse link 25 17,414,965 17,551,405 RGD:9068941
G IQCG IQ motif containing G JBrowse link 33 28,745,089 28,791,744 RGD:13508589
G LOC474798 thioredoxin-like JBrowse link 11 65,228,807 65,291,274 RGD:9068941
G LOC490081 tektin-4 JBrowse link 6 39,590,912 39,596,672 RGD:13508589
G LYZL4 lysozyme like 4 JBrowse link 23 11,526,560 11,540,724 RGD:9068941
G MET MET proto-oncogene, receptor tyrosine kinase JBrowse link 14 55,599,047 55,711,626 RGD:9068941
G MNS1 meiosis specific nuclear structural 1 JBrowse link 30 21,648,709 21,682,650 RGD:13508589
G MROH2B maestro heat like repeat family member 2B JBrowse link 4 68,369,175 68,432,433 RGD:9068941
G NME5 NME/NM23 family member 5 JBrowse link 11 25,772,162 25,792,856 RGD:13508589
G OAZ3 ornithine decarboxylase antizyme 3 JBrowse link 17 60,789,541 60,792,954 RGD:9068941
G ODF2 outer dense fiber of sperm tails 2 JBrowse link 9 55,060,437 55,096,363 RGD:13508589
G PRKACA protein kinase cAMP-activated catalytic subunit alpha JBrowse link 20 48,416,730 48,425,237 RGD:13508589
G QRICH2 glutamine rich 2 JBrowse link 9 4,395,501 4,408,302 RGD:9068941
G RAN RAN, member RAS oncogene family JBrowse link 26 1,435,077 1,436,893 RGD:9068941
G RNF38 ring finger protein 38 JBrowse link 11 52,764,216 52,827,993 RGD:9068941
G RPGR retinitis pigmentosa GTPase regulator JBrowse link X 33,056,371 33,105,036 RGD:13508589
G RSPH1 radial spoke head component 1 JBrowse link 31 36,771,829 36,811,067 RGD:9068941
G RSPH6A radial spoke head 6 homolog A JBrowse link 1 109,795,813 109,814,590 RGD:13508589
G SAXO1 stabilizer of axonemal microtubules 1 JBrowse link 11 38,771,201 38,873,442 RGD:13508589
G SAXO2 stabilizer of axonemal microtubules 2 JBrowse link 3 55,680,471 55,720,384 RGD:13508589
G SEPTIN4 septin 4 JBrowse link 9 33,138,167 33,162,212 RGD:9068941
G SLIRP SRA stem-loop interacting RNA binding protein JBrowse link 8 50,471,175 50,478,923 RGD:9068941
G SPACA9 sperm acrosome associated 9 JBrowse link 9 51,460,359 51,470,612 RGD:13508589
G SPAG16 sperm associated antigen 16 JBrowse link 37 20,782,855 21,690,523 RGD:13508589
G SPATA18 spermatogenesis associated 18 JBrowse link 13 44,996,770 45,034,327 RGD:9068941
G SPEF2 sperm flagellar 2 JBrowse link 4 72,699,672 72,864,260 RGD:9068941
G TACR1 tachykinin receptor 1 JBrowse link 17 48,038,010 48,178,971 RGD:9068941
G TACR2 tachykinin receptor 2 JBrowse link 4 20,518,797 20,531,118 RGD:9068941
G TCP11 t-complex 11 JBrowse link 12 4,286,863 4,306,152 RGD:13508589
G TCTE1 t-complex-associated-testis-expressed 1 JBrowse link 12 12,686,459 12,704,388 RGD:13508589
G TCTEX1D4 Tctex1 domain containing 4 JBrowse link 15 15,516,950 15,519,137 RGD:13508589
G TEKT3 tektin 3 JBrowse link 5 38,872,664 38,913,114 RGD:13508589
G TEKT5 tektin 5 JBrowse link 6 31,936,574 31,976,260 RGD:13508589
G TPPP2 tubulin polymerization promoting protein family member 2 JBrowse link 15 18,118,516 18,126,661 RGD:13508589
G TSSK4 testis specific serine kinase 4 JBrowse link 8 4,192,060 4,195,052 RGD:13508589
G TTC29 tetratricopeptide repeat domain 29 JBrowse link 15 45,093,105 45,338,890 RGD:9068941
G TXNDC2 thioredoxin domain containing 2 JBrowse link 7 75,822,005 75,824,032 RGD:9068941
G WBP2NL WBP2 N-terminal like JBrowse link 10 23,333,420 23,368,234 RGD:13508589
outer dense fiber term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AK1 adenylate kinase 1 JBrowse link 9 55,539,179 55,548,132 RGD:13508589
G CTSH cathepsin H JBrowse link 3 58,103,284 58,113,958 RGD:9068941
G DDX6 DEAD-box helicase 6 JBrowse link 5 15,001,988 15,034,128 RGD:9068941
G FLACC1 flagellum associated containing coiled-coil domains 1 JBrowse link 37 10,404,512 10,438,102 RGD:9068941
G MARCKS myristoylated alanine rich protein kinase C substrate JBrowse link 12 69,980,003 69,987,150 RGD:9068941
G ODF1 outer dense fiber of sperm tails 1 JBrowse link 13 4,137,119 4,146,557 RGD:13508589
G ODF2 outer dense fiber of sperm tails 2 JBrowse link 9 55,060,437 55,096,363 RGD:9068941
G ODF3 outer dense fiber of sperm tails 3 JBrowse link 18 25,353,822 25,357,399 RGD:13508589
G ODF4 outer dense fiber of sperm tails 4 JBrowse link 5 33,118,401 33,121,979 RGD:9068941
G RSPH1 radial spoke head component 1 JBrowse link 31 36,771,829 36,811,067 RGD:13508589
G TXNDC2 thioredoxin domain containing 2 JBrowse link 7 75,822,005 75,824,032 RGD:9068941
sperm annulus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DDX6 DEAD-box helicase 6 JBrowse link 5 15,001,988 15,034,128 RGD:9068941
G SEPTIN12 septin 12 JBrowse link 6 36,630,038 36,641,920 RGD:13508589
G SEPTIN2 septin 2 JBrowse link 25 51,296,486 51,330,508 RGD:9068941
G SEPTIN4 septin 4 JBrowse link 9 33,138,167 33,162,212 RGD:13508589
G SEPTIN6 septin 6 JBrowse link X 91,647,293 91,714,379 RGD:9068941
G SEPTIN7 septin 7 JBrowse link 14 47,395,704 47,494,873 RGD:9068941
sperm connecting piece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP4 A-kinase anchoring protein 4 JBrowse link X 42,935,831 42,946,248 RGD:13508589
G CAPZB capping actin protein of muscle Z-line subunit beta JBrowse link 2 79,182,668 79,311,529 RGD:9068941
G DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 JBrowse link 21 24,314,242 24,326,605 RGD:13508589
G FSIP2 fibrous sheath interacting protein 2 JBrowse link 36 28,196,668 28,271,660 RGD:13508589
G GLIPR1L1 GLIPR1 like 1 JBrowse link 10 15,901,517 15,915,828 RGD:9068941
G PMFBP1 polyamine modulated factor 1 binding protein 1 JBrowse link 5 77,831,040 77,880,357 RGD:9068941
G PRKAR1A protein kinase cAMP-dependent type I regulatory subunit alpha JBrowse link 9 15,180,940 15,203,035 RGD:9068941
G SPATA6 spermatogenesis associated 6 JBrowse link 15 12,464,523 12,610,835 RGD:13508589
G SPATA6L spermatogenesis associated 6 like JBrowse link 1 92,994,949 93,041,135 RGD:13508589
G SPATC1L spermatogenesis and centriole associated 1 like JBrowse link 31 39,467,365 39,475,061 RGD:13508589
G SUN5 Sad1 and UNC84 domain containing 5 JBrowse link 24 22,255,919 22,272,304 RGD:13508589
sperm end piece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP4 A-kinase anchoring protein 4 JBrowse link X 42,935,831 42,946,248 RGD:13508589
G CABYR calcium binding tyrosine phosphorylation regulated JBrowse link 7 64,223,591 64,239,362 RGD:9068941
G FSIP2 fibrous sheath interacting protein 2 JBrowse link 36 28,196,668 28,271,660 RGD:13508589
sperm fibrous sheath term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP14 A-kinase anchoring protein 14 JBrowse link X 91,900,154 91,927,629 RGD:9068941
G AKAP3 A-kinase anchoring protein 3 JBrowse link 27 40,217,313 40,255,934 RGD:13508589
G AKAP4 A-kinase anchoring protein 4 JBrowse link X 42,935,831 42,946,248 RGD:13508589
G CABYR calcium binding tyrosine phosphorylation regulated JBrowse link 7 64,223,591 64,239,362 RGD:13508589
G FLACC1 flagellum associated containing coiled-coil domains 1 JBrowse link 37 10,404,512 10,438,102 RGD:9068941
G FSCB fibrous sheath CABYR binding protein JBrowse link 8 22,004,599 22,033,057 RGD:9068941
G GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic JBrowse link 1 117,121,290 117,129,159 RGD:9068941
G LDHA lactate dehydrogenase A JBrowse link 21 40,829,844 40,840,947 RGD:9068941
G LOC479911 glutathione S-transferase Mu 3 JBrowse link 6 42,187,869 42,191,274 RGD:13508589
G NME8 NME/NM23 family member 8 JBrowse link 18 12,038,369 12,088,544 RGD:9068941
G PGK2 phosphoglycerate kinase 2 JBrowse link 12 17,616,653 17,622,073 RGD:9068941
G SPA17 sperm autoantigenic protein 17 JBrowse link 5 9,719,222 9,731,521 RGD:13508589
G TSGA10 testis specific 10 JBrowse link 10 43,556,248 43,685,221 RGD:13508589
sperm midpiece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACE angiotensin I converting enzyme JBrowse link 9 11,497,182 11,516,362 RGD:9068941
G AKAP3 A-kinase anchoring protein 3 JBrowse link 27 40,217,313 40,255,934 RGD:13508589
G AKAP4 A-kinase anchoring protein 4 JBrowse link X 42,935,831 42,946,248 RGD:13508589
G CCDC172 coiled-coil domain containing 172 JBrowse link 28 26,953,945 27,013,600 RGD:9068941
G CCR6 C-C motif chemokine receptor 6 JBrowse link 1 54,932,798 54,960,646 RGD:9068941
G CD52 CD52 molecule JBrowse link 2 73,699,427 73,701,046 RGD:13508589
G CD55 CD55 molecule JBrowse link 7 6,361,037 6,396,063 RGD:9068941
G CFAP65 cilia and flagella associated protein 65 JBrowse link 37 25,569,302 25,601,943 RGD:13508589
G CFAP69 cilia and flagella associated protein 69 JBrowse link 14 16,154,334 16,209,776 RGD:13508589
G DEFB1 defensin beta 1 JBrowse link 16 58,871,018 58,881,592 RGD:13508589
G FSIP2 fibrous sheath interacting protein 2 JBrowse link 36 28,196,668 28,271,660 RGD:13508589
G GABARAP GABA type A receptor-associated protein JBrowse link 5 32,207,879 32,209,976 RGD:13508589
G GRK3 G protein-coupled receptor kinase 3 JBrowse link 26 19,385,059 19,512,528 RGD:9068941
G HYAL3 hyaluronidase 3 JBrowse link 20 39,041,940 39,047,388 RGD:13508589
G IFT172 intraflagellar transport 172 JBrowse link 17 21,389,462 21,426,970 RGD:13508589
G IFT27 intraflagellar transport 27 JBrowse link 10 27,688,742 27,707,343 RGD:9068941
G IFT81 intraflagellar transport 81 JBrowse link 26 8,017,315 8,123,972 RGD:13508589
G LOC100685877 uncharacterized LOC100685877 JBrowse link 2 6,171,232 6,182,256 RGD:9068941
G LOC480492 lysozyme-like protein 6 JBrowse link 9 10,267,569 10,275,791 RGD:13508589
G LOC490081 tektin-4 JBrowse link 6 39,590,912 39,596,672 RGD:9068941
G MROH2B maestro heat like repeat family member 2B JBrowse link 4 68,369,175 68,432,433 RGD:13508589
G PACRG parkin coregulated JBrowse link 1 51,202,146 51,717,076 RGD:13508589
G PRKACA protein kinase cAMP-activated catalytic subunit alpha JBrowse link 20 48,416,730 48,425,237 RGD:9068941
G RABL2B RAB, member of RAS oncogene family like 2B JBrowse link 10 16,555,009 16,571,207 RGD:13508589
G SLC26A3 solute carrier family 26 member 3 JBrowse link 18 12,817,177 12,843,502 RGD:13508589
G SLC9A3R1 SLC9A3 regulator 1 JBrowse link 9 5,661,792 5,679,783 RGD:13508589
G SPEF2 sperm flagellar 2 JBrowse link 4 72,699,672 72,864,260 RGD:13508589
G SQSTM1 sequestosome 1 JBrowse link 11 1,859,776 1,869,289 RGD:9068941
G TACR1 tachykinin receptor 1 JBrowse link 17 48,038,010 48,178,971 RGD:13508589
G TACR2 tachykinin receptor 2 JBrowse link 4 20,518,797 20,531,118 RGD:13508589
G TACR3 tachykinin receptor 3 JBrowse link 32 24,812,344 24,888,452 RGD:13508589
G TCP11 t-complex 11 JBrowse link 12 4,286,863 4,306,152 RGD:9068941
G VPS13A vacuolar protein sorting 13 homolog A JBrowse link 1 81,191,125 81,426,337 RGD:13508589
sperm mitochondrial sheath term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AK2 adenylate kinase 2 JBrowse link 2 68,342,769 68,371,769 RGD:9068941
G HSP90AA1 heat shock protein 90 alpha family class A member 1 JBrowse link 8 70,091,203 70,096,107 RGD:9068941
sperm principal piece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP3 A-kinase anchoring protein 3 JBrowse link 27 40,217,313 40,255,934 RGD:13508589
G AKAP4 A-kinase anchoring protein 4 JBrowse link X 42,935,831 42,946,248 RGD:13508589
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 JBrowse link 38 321,246 420,262 RGD:9068941
G CABYR calcium binding tyrosine phosphorylation regulated JBrowse link 7 64,223,591 64,239,362 RGD:9068941
G CATSPER4 cation channel sperm associated 4 JBrowse link 2 73,789,706 73,804,463 RGD:13508589
G CATSPERD cation channel sperm associated auxiliary subunit delta JBrowse link 20 54,260,014 54,312,504 RGD:9068941
G CATSPERE catsper channel auxiliary subunit epsilon JBrowse link 7 35,477,118 35,675,981 RGD:13508589
G CATSPERG cation channel sperm associated auxiliary subunit gamma JBrowse link 1 114,637,365 114,663,180 RGD:13508589
G CATSPERZ catsper channel auxiliary subunit zeta JBrowse link 18 52,763,714 52,766,857 RGD:9068941
G CCR6 C-C motif chemokine receptor 6 JBrowse link 1 54,932,798 54,960,646 RGD:9068941
G DNAH8 dynein axonemal heavy chain 8 JBrowse link 12 7,617,638 7,972,842 RGD:9068941
G EFCAB2 EF-hand calcium binding domain 2 JBrowse link 7 35,917,156 36,038,825 RGD:9068941
G EFCAB9 EF-hand calcium binding domain 9 JBrowse link 4 40,055,027 40,076,789 RGD:13508589
G ENKUR enkurin, TRPC channel interacting protein JBrowse link 2 8,497,252 8,522,302 RGD:13508589
G ENO4 enolase 4 JBrowse link 28 27,392,650 27,418,725 RGD:9068941
G FSCB fibrous sheath CABYR binding protein JBrowse link 8 22,004,599 22,033,057 RGD:9068941
G FSIP2 fibrous sheath interacting protein 2 JBrowse link 36 28,196,668 28,271,660 RGD:13508589
G GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic JBrowse link 1 117,121,290 117,129,159 RGD:9068941
G HK1 hexokinase 1 JBrowse link 4 20,396,761 20,516,889 RGD:9068941
G IFT172 intraflagellar transport 172 JBrowse link 17 21,389,462 21,426,970 RGD:13508589
G IFT27 intraflagellar transport 27 JBrowse link 10 27,688,742 27,707,343 RGD:9068941
G IFT81 intraflagellar transport 81 JBrowse link 26 8,017,315 8,123,972 RGD:13508589
G KIF2A kinesin family member 2A JBrowse link 2 48,642,961 48,715,605 RGD:13508589
G LOC490081 tektin-4 JBrowse link 6 39,590,912 39,596,672 RGD:9068941
G NME8 NME/NM23 family member 8 JBrowse link 18 12,038,369 12,088,544 RGD:13508589
G PFKM phosphofructokinase, muscle JBrowse link 27 6,620,300 6,640,649 RGD:9068941
G ROPN1 rhophilin associated tail protein 1 JBrowse link 33 27,021,990 27,056,675 RGD:13508589
G SCNN1A sodium channel epithelial 1 subunit alpha JBrowse link 27 38,612,206 38,638,212 RGD:9068941
G SLC9B1 solute carrier family 9 member B1 JBrowse link 32 24,292,961 24,352,795 RGD:9068941
G SLC9B2 solute carrier family 9 member B2 JBrowse link 32 24,354,741 24,419,198 RGD:13508589
G SPA17 sperm autoantigenic protein 17 JBrowse link 5 9,719,222 9,731,521 RGD:13508589
G SPAG6 sperm associated antigen 6 JBrowse link 2 10,737,260 10,804,080 RGD:13508589
G TSGA10 testis specific 10 JBrowse link 10 43,556,248 43,685,221 RGD:13508589

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 16224
    cellular anatomical entity 16056
      organelle 11222
        cilium 626
          motile cilium 195
            9+2 motile cilium 147
              sperm flagellum 136
                outer dense fiber 11
                sperm annulus 6
                sperm connecting piece 11
                sperm end piece 3
                sperm fibrous sheath 13
                sperm midpiece 33
                sperm mitochondrial sheath 2
                sperm principal piece 33
Path 2
Term Annotations click to browse term
  cellular_component 16224
    cellular anatomical entity 16056
      cell projection 2291
        plasma membrane bounded cell projection 2247
          cilium 626
            motile cilium 195
              9+2 motile cilium 147
                sperm flagellum 136
                  outer dense fiber 11
                  sperm annulus 6
                  sperm connecting piece 11
                  sperm end piece 3
                  sperm fibrous sheath 13
                  sperm midpiece 33
                  sperm mitochondrial sheath 2
                  sperm principal piece 33
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.