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ONTOLOGY REPORT - ANNOTATIONS


Term:sperm flagellum
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Accession:GO:0036126 term browser browse the term
Definition:A microtubule-based flagellum (or cilium) that is part of a sperm, a mature male germ cell that develops from a spermatid.
Comment:Note that cilia and eukaryotic flagella are deemed to be equivalent. In this case community usage is always 'flagellum', hence the primary term name, but the cilium parentage is deliberate.
Synonyms:exact_synonym: sperm cilium;   sperm tail


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sperm flagellum term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABHD2 abhydrolase domain containing 2, acylglycerol lipase JBrowse link 7 54,655,694 54,776,140 RGD:14298760
G AK1 adenylate kinase 1 JBrowse link 1 268,355,032 268,365,659 RGD:9068941
G AK2 adenylate kinase 2 JBrowse link 6 89,295,164 89,318,169 RGD:9068941
G AK8 adenylate kinase 8 JBrowse link 1 272,497,661 272,625,668 RGD:9068941
G ATP1A1 ATPase Na+/K+ transporting subunit alpha 1 JBrowse link 4 104,353,506 104,384,321 RGD:14298760
G ATP1B1 ATPase Na+/K+ transporting subunit beta 1 JBrowse link 4 81,912,543 81,937,015 RGD:14298760
G ATP1B3 ATPase Na+/K+ transporting subunit beta 3 JBrowse link 13 82,680,442 82,727,052 RGD:9068941
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 JBrowse link 9 64,336,354 64,445,669 RGD:14298760
G CABCOCO1 ciliary associated calcium binding coiled-coil 1 JBrowse link 14 65,152,913 65,277,978 RGD:9068941
G CATSPER2 cation channel sperm associated 2 JBrowse link 1 127,814,349 127,831,023 RGD:9068941
G CCDC181 coiled-coil domain containing 181 JBrowse link 4 81,561,007 81,593,922 RGD:14298760
G CCR6 C-C motif chemokine receptor 6 JBrowse link 1 2,016,600 2,034,172 RGD:9068941
G CFAP251 cilia and flagella associated protein 251 JBrowse link 14 30,712,538 30,792,865 RGD:14298760
G CFAP65 cilia and flagella associated protein 65 JBrowse link 15 121,026,365 121,067,224 RGD:9068941
G CFAP70 cilia and flagella associated protein 70 JBrowse link 14 76,075,269 76,199,898 RGD:14298760
G CST11 cystatin 11 JBrowse link 17 30,415,161 30,416,984 RGD:14298760
G CUL3 cullin 3 JBrowse link 15 126,191,605 126,287,148 RGD:14298760
G DCDC2C doublecortin domain containing 2C JBrowse link 3 131,082,277 131,194,726 RGD:9068941
G DNAH1 dynein axonemal heavy chain 1 JBrowse link 13 34,455,154 34,544,147 RGD:14298760
G DNAH17 dynein axonemal heavy chain 17 JBrowse link 12 3,485,166 3,590,325 RGD:14298760
G DNAH2 dynein axonemal heavy chain 2 JBrowse link 12 52,982,217 53,086,744 RGD:9068941
G DNAH8 dynein axonemal heavy chain 8 JBrowse link 7 34,197,185 34,479,640 RGD:9068941
G DNAI2 dynein axonemal intermediate chain 2 JBrowse link 12 6,808,966 6,832,767 RGD:14298760
G DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 JBrowse link 9 8,342,207 8,358,617 RGD:9068941
G DNALI1 dynein axonemal light intermediate chain 1 JBrowse link 6 93,612,263 93,621,486 RGD:9068941
G DRD2 dopamine receptor D2 JBrowse link 9 41,068,618 41,135,262 RGD:9068941
G ENKUR enkurin, TRPC channel interacting protein JBrowse link 10 50,310,497 50,364,311 RGD:9068941
G FLACC1 flagellum associated containing coiled-coil domains 1 JBrowse link 15 104,950,504 104,986,350 RGD:9068941
G GAS8 growth arrest specific 8 JBrowse link 6 86,817 105,987 RGD:9068941
G HSP90AA1 heat shock protein 90 alpha family class A member 1 RGD:9068941
G IFT27 intraflagellar transport 27 JBrowse link 5 10,994,182 11,015,476 RGD:9068941
G IFT88 intraflagellar transport 88 JBrowse link 11 943,444 1,025,617 RGD:9068941
G IQCG IQ motif containing G JBrowse link 13 134,540,048 134,588,122 RGD:14298760
G LOC110259951 tektin-4 JBrowse link 3 40,738,065 40,744,248 RGD:14298760
G LYZL4 lysozyme like 4 JBrowse link 13 25,987,662 25,992,607 RGD:14298760
G MET MET proto-oncogene, receptor tyrosine kinase JBrowse link 18 29,426,044 29,541,526 RGD:9068941
G MNS1 meiosis specific nuclear structural 1 JBrowse link 1 115,471,904 115,526,344 RGD:9068941
G MROH2B maestro heat like repeat family member 2B JBrowse link 16 25,920,647 25,985,074 RGD:9068941
G NME5 NME/NM23 family member 5 JBrowse link 2 140,132,871 140,168,655 RGD:14298760
G OAZ3 ornithine decarboxylase antizyme 3 JBrowse link 4 97,439,993 97,448,493 RGD:9068941
G ODF2 outer dense fiber of sperm tails 2 JBrowse link 1 268,856,755 268,893,390 RGD:14298760
G PRKACA protein kinase cAMP-activated catalytic subunit alpha JBrowse link 2 65,074,876 65,095,564 RGD:14298760
G QRICH2 glutamine rich 2 JBrowse link 12 5,174,531 5,203,797 RGD:14298760
G RAN RAN, member RAS oncogene family JBrowse link 14 24,312,810 24,318,024 RGD:9068941
G RNF38 ring finger protein 38 JBrowse link 1 237,111,002 237,240,311 RGD:9068941
G RPGR retinitis pigmentosa GTPase regulator JBrowse link X 34,238,961 34,522,814 RGD:9068941
G RSPH1 radial spoke head component 1 JBrowse link 13 205,808,923 205,827,098 RGD:9068941
G RSPH6A radial spoke head 6 homolog A JBrowse link 6 52,118,695 52,139,183 RGD:14298760
G SAXO1 stabilizer of axonemal microtubules 1 JBrowse link 1 203,788,322 203,923,889 RGD:14298760
G SAXO2 stabilizer of axonemal microtubules 2 JBrowse link 7 50,977,040 50,999,026 RGD:14298760
G SEPTIN3 septin 3 JBrowse link 5 6,631,750 6,657,837 RGD:14298760
G SEPTIN4 septin 4 JBrowse link 12 34,772,776 34,785,176 RGD:9068941
G SLIRP SRA stem-loop interacting RNA binding protein JBrowse link 7 100,710,472 100,718,290 RGD:9068941
G SPACA9 sperm acrosome associated 9 JBrowse link 1 272,625,701 272,635,406 RGD:14298760
G SPAG16 sperm associated antigen 16 JBrowse link 15 115,809,152 116,760,976 RGD:14298760
G SPATA18 spermatogenesis associated 18 JBrowse link 8 39,163,001 39,206,217 RGD:9068941
G SPEF2 sperm flagellar 2 JBrowse link 16 21,088,463 21,264,591 RGD:14298760
G TACR1 tachykinin receptor 1 JBrowse link 3 67,839,367 68,021,733 RGD:9068941
G TACR2 tachykinin receptor 2 JBrowse link 14 72,463,405 72,476,034 RGD:9068941
G TCP11 t-complex 11 JBrowse link 7 31,007,460 31,161,082 RGD:14298760
G TCTE1 t-complex-associated-testis-expressed 1 JBrowse link 7 39,275,595 39,288,326 RGD:14298760
G TCTE3 t-complex-associated-testis-expressed 3 JBrowse link 1 541,010 552,018 RGD:9068941
G TCTEX1D4 Tctex1 domain containing 4 JBrowse link 6 166,527,350 166,528,855 RGD:14298760
G TEKT3 tektin 3 JBrowse link 12 58,734,289 58,773,400 RGD:14298760
G TEKT5 tektin 5 JBrowse link 3 32,350,906 32,393,123 RGD:14298760
G TPPP2 tubulin polymerization promoting protein family member 2 JBrowse link 7 78,106,126 78,108,570 RGD:14298760
G TSSK4 testis specific serine kinase 4 JBrowse link 7 75,094,921 75,104,189 RGD:14298760
G TTC29 tetratricopeptide repeat domain 29 JBrowse link 8 81,746,479 81,981,617 RGD:9068941
G TXNDC2 thioredoxin domain containing 2 JBrowse link 6 98,271,124 98,276,039 RGD:9068941
G TXNDC8 thioredoxin domain containing 8 (spermatozoa) JBrowse link 1 251,312,120 251,340,761 RGD:9068941
outer dense fiber term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AK1 adenylate kinase 1 JBrowse link 1 268,355,032 268,365,659 RGD:14298760
G CTSH cathepsin H JBrowse link 7 48,084,882 48,106,072 RGD:9068941
G DDX6 DEAD-box helicase 6 JBrowse link 9 46,025,616 46,063,836 RGD:9068941
G FLACC1 flagellum associated containing coiled-coil domains 1 JBrowse link 15 104,950,504 104,986,350 RGD:9068941
G MARCKS myristoylated alanine rich protein kinase C substrate JBrowse link 1 79,789,796 79,795,895 RGD:9068941
G ODF1 outer dense fiber of sperm tails 1 JBrowse link 4 34,511,077 34,520,601 RGD:14298760
G ODF2 outer dense fiber of sperm tails 2 JBrowse link 1 268,856,755 268,893,390 RGD:9068941
G ODF3 outer dense fiber of sperm tails 3 JBrowse link 2 20,869 25,845 RGD:14298760
G ODF4 outer dense fiber of sperm tails 4 JBrowse link 12 53,517,175 53,525,458 RGD:9068941
G RSPH1 radial spoke head component 1 JBrowse link 13 205,808,923 205,827,098 RGD:9068941
G TXNDC2 thioredoxin domain containing 2 JBrowse link 6 98,271,124 98,276,039 RGD:9068941
sperm annulus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DDX6 DEAD-box helicase 6 JBrowse link 9 46,025,616 46,063,836 RGD:9068941
G SEPT12 septin 12 JBrowse link 3 37,604,669 37,617,336 RGD:14298760
G SEPTIN2 septin 2 JBrowse link 15 140,023,836 140,058,291 RGD:14298760
G SEPTIN4 septin 4 JBrowse link 12 34,772,776 34,785,176 RGD:14298760
G SEPTIN6 septin 6 JBrowse link X 98,033,212 98,106,082 RGD:9068941
G SEPTIN7 septin 7 JBrowse link 18 38,082,626 38,183,354 RGD:9068941
sperm connecting piece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP4 A-kinase anchoring protein 4 JBrowse link X 43,885,584 43,895,142 RGD:14298760
G CAPZB capping actin protein of muscle Z-line subunit beta JBrowse link 6 77,780,682 77,912,653 RGD:9068941
G DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 JBrowse link 9 8,342,207 8,358,617 RGD:14298760
G FSIP2 fibrous sheath interacting protein 2 JBrowse link 15 90,902,067 91,000,873 RGD:9068941
G GLIPR1L1 GLIPR1 like 1 JBrowse link 5 38,629,501 38,652,269 RGD:9068941
G PMFBP1 polyamine modulated factor 1 binding protein 1 JBrowse link 6 15,014,742 15,130,971 RGD:9068941
G PRKAR1A protein kinase cAMP-dependent type I regulatory subunit alpha JBrowse link 12 11,662,344 11,681,490 RGD:14298760
G SPATA6 spermatogenesis associated 6 JBrowse link 6 163,278,954 163,410,174 RGD:14298760
G SPATA6L spermatogenesis associated 6 like JBrowse link 1 217,287,961 217,353,093 RGD:14298760
G SPATC1L spermatogenesis and centriole associated 1 like RGD:14298760
G SUN5 Sad1 and UNC84 domain containing 5 JBrowse link 17 36,508,569 36,528,052 RGD:14298760
sperm end piece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP4 A-kinase anchoring protein 4 JBrowse link X 43,885,584 43,895,142 RGD:14298760
G CABYR calcium binding tyrosine phosphorylation regulated JBrowse link 6 108,971,340 108,997,295 RGD:9068941
G FSIP2 fibrous sheath interacting protein 2 JBrowse link 15 90,902,067 91,000,873 RGD:9068941
sperm fibrous sheath term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP14 A-kinase anchoring protein 14 JBrowse link X 98,234,469 98,255,396 RGD:9068941
G AKAP3 A-kinase anchoring protein 3 JBrowse link 5 65,788,744 65,816,031 RGD:14298760
G AKAP4 A-kinase anchoring protein 4 JBrowse link X 43,885,584 43,895,142 RGD:14298760
G CABYR calcium binding tyrosine phosphorylation regulated JBrowse link 6 108,971,340 108,997,295 RGD:14298760
G FLACC1 flagellum associated containing coiled-coil domains 1 JBrowse link 15 104,950,504 104,986,350 RGD:9068941
G FSCB fibrous sheath CABYR binding protein JBrowse link 1 174,732,612 174,734,834 RGD:9068941
G GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic JBrowse link 6 44,968,965 44,978,992 RGD:9068941
G GSTM3 glutathione S-transferase mu 3 JBrowse link 4 110,330,027 110,332,957 RGD:14298760
G LDHA lactate dehydrogenase A JBrowse link 2 40,814,163 40,827,284 RGD:9068941
G NME8 NME/NM23 family member 8 JBrowse link 9 108,358,289 108,393,755 RGD:9068941
G PGK2 phosphoglycerate kinase 2 JBrowse link 7 43,839,239 43,840,892 RGD:14298760
G SPA17 sperm autoantigenic protein 17 JBrowse link 9 51,918,916 51,931,459 RGD:14298760
G TSGA10 testis specific 10 JBrowse link 3 55,197,709 55,319,628 RGD:14298760
sperm midpiece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACE angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 JBrowse link 12 15,394,487 15,414,609 RGD:9068941
G AKAP3 A-kinase anchoring protein 3 JBrowse link 5 65,788,744 65,816,031 RGD:14298760
G AKAP4 A-kinase anchoring protein 4 JBrowse link X 43,885,584 43,895,142 RGD:14298760
G ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 JBrowse link 4 90,341,316 90,371,040 RGD:14298760
G CCDC172 coiled-coil domain containing 172 JBrowse link 14 126,549,112 126,637,606 RGD:9068941
G CCR6 C-C motif chemokine receptor 6 JBrowse link 1 2,016,600 2,034,172 RGD:14298760
G CD52 CD52 molecule JBrowse link 6 83,723,762 83,725,619 RGD:9068941
G CD55 CD55 molecule (Cromer blood group) JBrowse link 9 67,933,069 67,960,380 RGD:14298760
G CFAP65 cilia and flagella associated protein 65 JBrowse link 15 121,026,365 121,067,224 RGD:14298760
G CFAP69 cilia and flagella associated protein 69 JBrowse link 9 70,373,422 70,430,383 RGD:14298760
G DEFB1 defensin beta 1 RGD:14298760
G DEFB1 defensin, beta 1 JBrowse link 15 38,076,057 38,077,899 RGD:14298760
G FSIP2 fibrous sheath interacting protein 2 JBrowse link 15 90,902,067 91,000,873 RGD:9068941
G GABARAP GABA type A receptor-associated protein JBrowse link 12 52,596,130 52,598,166 RGD:9068941
G GRK3 G protein-coupled receptor kinase 3 JBrowse link 14 43,305,255 43,445,626 RGD:9068941
G HYAL3 hyaluronidase 3 JBrowse link 13 32,790,843 32,796,995 RGD:14298760
G IFT172 intraflagellar transport 172 JBrowse link 3 111,683,674 111,718,504 RGD:14298760
G IFT27 intraflagellar transport 27 JBrowse link 5 10,994,182 11,015,476 RGD:14298760
G IFT81 intraflagellar transport 81 JBrowse link 14 31,425,548 31,615,003 RGD:9068941
G LOC110255686 patched domain-containing protein 3-like JBrowse link 10 42,987,147 43,003,096 RGD:9068941
G LOC110259951 tektin-4 JBrowse link 3 40,738,065 40,744,248 RGD:14298760
G LOC110260809 rab-like protein 2A JBrowse link 5 104,510,606 104,525,994 RGD:9068941
G LYZL6 lysozyme like 6 JBrowse link 12 17,842,766 17,847,017 RGD:14298760
G MROH2B maestro heat like repeat family member 2B JBrowse link 16 25,920,647 25,985,074 RGD:14298760
G PACRG parkin coregulated JBrowse link 1 4,964,686 5,465,258 RGD:14298760
G PRKACA protein kinase cAMP-activated catalytic subunit alpha JBrowse link 2 65,074,876 65,095,564 RGD:9068941
G RABL2B RAB, member of RAS oncogene family like 2B JBrowse link 5 10,346 20,499 RGD:14298760
G SLC26A3 solute carrier family 26 member 3 JBrowse link 9 107,480,629 107,518,771 RGD:14298760
G SLC26A6 solute carrier family 26 member 6 JBrowse link 13 31,319,287 31,330,649 RGD:9068941
G SLC9A3R1 SLC9A3 regulator 1 JBrowse link 12 6,466,138 6,483,539 RGD:14298760
G SPEF2 sperm flagellar 2 JBrowse link 16 21,088,463 21,264,591 RGD:14298760
G SQSTM1 sequestosome 1 JBrowse link 2 78,752,768 78,763,998 RGD:14298760
G TACR1 tachykinin receptor 1 JBrowse link 3 67,839,367 68,021,733 RGD:14298760
G TACR2 tachykinin receptor 2 JBrowse link 14 72,463,405 72,476,034 RGD:14298760
G TACR3 tachykinin receptor 3 JBrowse link 8 117,662,122 117,718,317 RGD:14298760
G TCP11 t-complex 11 JBrowse link 7 31,007,460 31,161,082 RGD:9068941
G VPS13A vacuolar protein sorting 13 homolog A JBrowse link 1 230,069,339 230,331,343 RGD:9068941
sperm mitochondrial sheath term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AK2 adenylate kinase 2 JBrowse link 6 89,295,164 89,318,169 RGD:9068941
G HSP90AA1 heat shock protein 90 alpha family class A member 1 RGD:9068941
sperm principal piece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP3 A-kinase anchoring protein 3 JBrowse link 5 65,788,744 65,816,031 RGD:14298760
G AKAP4 A-kinase anchoring protein 4 JBrowse link X 43,885,584 43,895,142 RGD:14298760
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 JBrowse link 9 64,336,354 64,445,669 RGD:9068941
G CABYR calcium binding tyrosine phosphorylation regulated JBrowse link 6 108,971,340 108,997,295 RGD:9068941
G CATSPER4 cation channel sperm associated 4 JBrowse link 6 83,607,607 83,627,860 RGD:14298760
G CATSPERD cation channel sperm associated auxiliary subunit delta JBrowse link 2 73,207,458 73,266,158 RGD:9068941
G CATSPERE catsper channel auxiliary subunit epsilon JBrowse link 10 17,268,401 17,355,145 RGD:9068941
G CATSPERG cation channel sperm associated auxiliary subunit gamma JBrowse link 6 47,252,307 47,282,833 RGD:14298760
G CATSPERZ catsper channel auxiliary subunit zeta JBrowse link 2 7,813,296 7,817,327 RGD:14298760
G CCR6 C-C motif chemokine receptor 6 JBrowse link 1 2,016,600 2,034,172 RGD:14298760
G DNAH8 dynein axonemal heavy chain 8 JBrowse link 7 34,197,185 34,479,640 RGD:9068941
G EFCAB2 EF-hand calcium binding domain 2 JBrowse link 10 17,558,224 17,655,269 RGD:9068941
G EFCAB9 EF-hand calcium binding domain 9 JBrowse link 16 51,987,090 51,996,019 RGD:9068941
G ENKUR enkurin, TRPC channel interacting protein JBrowse link 10 50,310,497 50,364,311 RGD:14298760
G ENO4 enolase 4 JBrowse link 14 127,032,217 127,063,660 RGD:9068941
G FSCB fibrous sheath CABYR binding protein JBrowse link 1 174,732,612 174,734,834 RGD:9068941
G FSIP2 fibrous sheath interacting protein 2 JBrowse link 15 90,902,067 91,000,873 RGD:9068941
G GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic JBrowse link 6 44,968,965 44,978,992 RGD:9068941
G HK1 hexokinase 1 JBrowse link 14 72,383,328 72,460,927 RGD:9068941
G IFT172 intraflagellar transport 172 JBrowse link 3 111,683,674 111,718,504 RGD:14298760
G IFT27 intraflagellar transport 27 JBrowse link 5 10,994,182 11,015,476 RGD:14298760
G IFT81 intraflagellar transport 81 JBrowse link 14 31,425,548 31,615,003 RGD:9068941
G KIF2A kinesin family member 2A JBrowse link 16 41,016,680 41,101,122 RGD:14298760
G LOC110259951 tektin-4 JBrowse link 3 40,738,065 40,744,248 RGD:14298760
G NME8 NME/NM23 family member 8 JBrowse link 9 108,358,289 108,393,755 RGD:14298760
G PFKM phosphofructokinase, muscle JBrowse link 5 78,475,473 78,525,052 RGD:14298760
G ROPN1 rhophilin associated tail protein 1 JBrowse link 13 136,395,628 136,428,170 RGD:14298760
G SCNN1A sodium channel epithelial 1 subunit alpha JBrowse link 5 64,287,529 64,312,917 RGD:9068941
G SLC9B1 solute carrier family 9 member B1 JBrowse link 8 118,052,091 118,134,685 RGD:9068941
G SLC9B2 solute carrier family 9 member B2 JBrowse link 8 117,996,777 118,049,430 RGD:14298760
G SPA17 sperm autoantigenic protein 17 JBrowse link 9 51,918,916 51,931,459 RGD:14298760
G SPAG6 sperm associated antigen 6 JBrowse link 10 52,496,457 52,571,977 RGD:14298760
G TSGA10 testis specific 10 JBrowse link 3 55,197,709 55,319,628 RGD:14298760

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 16659
    cellular anatomical entity 16497
      organelle 11170
        cilium 632
          motile cilium 213
            9+2 motile cilium 152
              sperm flagellum 141
                outer dense fiber 11
                sperm annulus 6
                sperm connecting piece 11
                sperm end piece 3
                sperm fibrous sheath 13
                sperm midpiece 37
                sperm mitochondrial sheath 2
                sperm principal piece 33
Path 2
Term Annotations click to browse term
  cellular_component 16659
    cellular anatomical entity 16497
      cell projection 2296
        plasma membrane bounded cell projection 2256
          cilium 632
            motile cilium 213
              9+2 motile cilium 152
                sperm flagellum 141
                  outer dense fiber 11
                  sperm annulus 6
                  sperm connecting piece 11
                  sperm end piece 3
                  sperm fibrous sheath 13
                  sperm midpiece 37
                  sperm mitochondrial sheath 2
                  sperm principal piece 33
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.