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ONTOLOGY REPORT - ANNOTATIONS


Term:sperm flagellum
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Accession:GO:0036126 term browser browse the term
Definition:A microtubule-based flagellum (or cilium) that is part of a sperm, a mature male germ cell that develops from a spermatid.
Comment:Note that cilia and eukaryotic flagella are deemed to be equivalent. In this case community usage is always 'flagellum', hence the primary term name, but the cilium parentage is deliberate.
Synonyms:exact_synonym: sperm cilium;   sperm tail


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sperm flagellum term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abhd2 abhydrolase domain containing 2, acylglycerol lipase JBrowse link NW_004936483 14,974,053 15,079,824 RGD:9068941
G Ak1 adenylate kinase 1 JBrowse link NW_004936487 15,507,663 15,517,401 RGD:9068941
G Ak2 adenylate kinase 2 JBrowse link NW_004936474 15,887,014 15,908,522 RGD:9068941
G Ak8 adenylate kinase 8 JBrowse link NW_004936487 19,212,155 19,321,601 RGD:9068941
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 JBrowse link NW_004936627 1,555,151 1,584,370 RGD:9068941
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 JBrowse link NW_004936481 17,438,146 17,460,329 RGD:9068941
G Atp1b3 ATPase Na+/K+ transporting subunit beta 3 JBrowse link NW_004936540 3,621,656 3,640,885 RGD:9068941
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 JBrowse link NW_004936567 944,825 1,039,920 RGD:9068941
G Cabcoco1 ciliary associated calcium binding coiled-coil 1 JBrowse link NW_004936614 1,373,873 1,476,470 RGD:9068941
G Catsper2 cation channel sperm associated 2 JBrowse link NW_004936471 6,791,490 6,809,048 RGD:9068941
G Ccdc181 coiled-coil domain containing 181 JBrowse link NW_004936481 17,235,194 17,250,718 RGD:9068941
G Ccr6 C-C motif chemokine receptor 6 JBrowse link NW_004936489 16,669,297 16,689,451 RGD:9068941
G Cfap251 cilia and flagella associated protein 251 JBrowse link NW_004936558 2,425,768 2,493,311 RGD:9068941
G Cfap70 cilia and flagella associated protein 70 JBrowse link NW_004936521 5,680,846 5,785,818 RGD:9068941
G Cst11 cystatin 11 JBrowse link NW_004936620 2,115,927 2,119,683 RGD:9068941
G Cul3 cullin 3 JBrowse link NW_004936569 6,067,230 6,131,467 RGD:9068941
G Dcdc2c doublecortin domain containing 2C JBrowse link NW_004936532 1,816,573 1,866,029 RGD:9068941
G Dnah1 dynein axonemal heavy chain 1 JBrowse link NW_004936473 3,170,060 3,238,608 RGD:9068941
G Dnah17 dynein axonemal heavy chain 17 JBrowse link NW_004936594 2,987,744 3,079,553 RGD:9068941
G Dnah2 dynein axonemal heavy chain 2 JBrowse link NW_004936595 970,004 1,076,582 RGD:9068941
G Dnah8 dynein axonemal heavy chain 8 JBrowse link NW_004936476 20,592,440 20,888,692 RGD:9068941
G Dnai2 dynein axonemal intermediate chain 2 JBrowse link NW_004936655 163,565 188,431 RGD:9068941
G Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 JBrowse link NW_004936498 3,042,151 3,055,966 RGD:9068941
G Dnali1 dynein axonemal light intermediate chain 1 JBrowse link NW_004936474 19,779,731 19,787,860 RGD:9068941
G Drd2 dopamine receptor D2 JBrowse link NW_004936612 1,094,686 1,154,149 RGD:9068941
G Enkur enkurin, TRPC channel interacting protein JBrowse link NW_004936484 679,541 700,898 RGD:9068941
G Flacc1 flagellum associated containing coiled-coil domains 1 JBrowse link NW_004936726 600,213 631,513 RGD:9068941
G Gas8 growth arrest specific 8 JBrowse link NW_004936641 92,893 109,006 RGD:9068941
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 JBrowse link NW_004936835 316,767 321,999 RGD:9068941
G Ift27 intraflagellar transport 27 JBrowse link NW_004936492 4,077,957 4,089,898 RGD:9068941
G Ift88 intraflagellar transport 88 JBrowse link NW_004936720 1,041,216 1,168,725 RGD:9068941
G Iqcg IQ motif containing G JBrowse link NW_004936784 172,190 217,234 RGD:9068941
G LOC101959351 cilia- and flagella-associated protein 65 JBrowse link NW_004936569 1,449,654 1,462,582 RGD:9068941
G LOC101966632 sperm-associated antigen 16 protein JBrowse link NW_004936586 3,264,953 3,407,823 RGD:9068941
G Lyzl4 lysozyme like 4 JBrowse link NW_004936695 2,668,444 2,674,605 RGD:9068941
G Met MET proto-oncogene, receptor tyrosine kinase JBrowse link NW_004936589 2,280,803 2,390,179 RGD:9068941
G Mns1 meiosis specific nuclear structural 1 JBrowse link NW_004936471 17,767,063 17,798,507 RGD:9068941
G Mroh2b maestro heat like repeat family member 2B JBrowse link NW_004936518 1,593,156 1,665,577 RGD:9068941
G Nme5 NME/NM23 family member 5 JBrowse link NW_004936531 7,296,565 7,318,628 RGD:9068941
G Oaz3 ornithine decarboxylase antizyme 3 JBrowse link NW_004936580 1,963,372 1,966,086 RGD:9068941
G Odf2 outer dense fiber of sperm tails 2 JBrowse link NW_004936487 15,987,893 16,029,539 RGD:9068941
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link NW_004936659 2,750,015 2,765,914 RGD:9068941
G Qrich2 glutamine rich 2 JBrowse link NW_004936594 1,383,332 1,423,961 RGD:9068941
G Ran RAN, member RAS oncogene family JBrowse link NW_004936660 1,669,352 1,673,972 RGD:9068941
G Rnf38 ring finger protein 38 JBrowse link NW_004936524 4,281,124 4,359,378 RGD:9068941
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link NW_004936502 5,163,164 5,212,940 RGD:9068941
G Rsph1 radial spoke head component 1 JBrowse link NW_004936500 1,402,289 1,423,398 RGD:9068941
G Rsph6a radial spoke head 6 homolog A JBrowse link NW_004936706 2,144,528 2,161,767 RGD:9068941
G Saxo1 stabilizer of axonemal microtubules 1 JBrowse link NW_004936652 885,616 915,113 RGD:9068941
G Septin4 septin 4 JBrowse link NW_004936490 4,597,888 4,609,905 RGD:9068941
G Slirp SRA stem-loop interacting RNA binding protein JBrowse link NW_004936488 6,486,807 6,494,555 RGD:9068941
G Spaca9 sperm acrosome associated 9 JBrowse link NW_004936487 19,322,207 19,331,434 RGD:9068941
G Spata18 spermatogenesis associated 18 JBrowse link NW_004936482 15,178,667 15,262,897 RGD:9068941
G Spef2 sperm flagellar 2 JBrowse link NW_004936518 5,901,076 6,072,012 RGD:9068941
G Tacr1 tachykinin receptor 1 JBrowse link NW_004936556 1,266,621 1,421,271 RGD:9068941
G Tacr2 tachykinin receptor 2 JBrowse link NW_004936521 9,053,179 9,065,790 RGD:9068941
G Tcp11 t-complex 11 JBrowse link NW_004936476 24,063,854 24,080,677 RGD:9068941
G Tcte1 t-complex-associated-testis-expressed 1 JBrowse link NW_004936476 15,795,358 15,807,563 RGD:9068941
G Tcte3 t-complex-associated-testis-expressed 3 JBrowse link NW_004936489 18,180,621 18,201,739 RGD:9068941
G Tctex1d4 Tctex1 domain containing 4 JBrowse link NW_004936474 26,032,109 26,032,777 RGD:9068941
G Tekt3 tektin 3 JBrowse link NW_004936724 1,815,562 1,843,643 RGD:9068941
G Tekt5 tektin 5 JBrowse link NW_004936530 8,925,593 8,959,849 RGD:9068941
G Tppp2 tubulin polymerization promoting protein family member 2 JBrowse link NW_004936880 230,626 232,540 RGD:9068941
G Tssk4 testis specific serine kinase 4 JBrowse link NW_004936722 345,698 348,531 RGD:9068941
G Ttc29 tetratricopeptide repeat domain 29 JBrowse link NW_004936535 2,468,640 2,658,628 RGD:9068941
G Txndc2 thioredoxin domain containing 2 JBrowse link NW_004936626 1,608,877 1,610,472 RGD:9068941
G Txndc8 thioredoxin domain containing 8 JBrowse link NW_004936559 2,753,167 2,765,110 RGD:9068941
G Wbp2nl WBP2 N-terminal like JBrowse link NW_004936492 10,208 13,477 RGD:9068941
outer dense fiber term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak1 adenylate kinase 1 JBrowse link NW_004936487 15,507,663 15,517,401 RGD:9068941
G Ctsh cathepsin H JBrowse link NW_004936471 37,135,200 37,156,081 RGD:9068941
G Ddx6 DEAD-box helicase 6 JBrowse link NW_004936542 3,748,599 3,781,405 RGD:9068941
G Flacc1 flagellum associated containing coiled-coil domains 1 JBrowse link NW_004936726 600,213 631,513 RGD:9068941
G Marcks myristoylated alanine rich protein kinase C substrate JBrowse link NW_004936679 2,373,104 2,379,230 RGD:9068941
G Odf1 outer dense fiber of sperm tails 1 JBrowse link NW_004936470 41,069,033 41,078,020 RGD:9068941
G Odf2 outer dense fiber of sperm tails 2 JBrowse link NW_004936487 15,987,893 16,029,539 RGD:9068941
G Odf3 outer dense fiber of sperm tails 3 JBrowse link NW_004936888 48,217 50,747 RGD:9068941
G Odf4 outer dense fiber of sperm tails 4 JBrowse link NW_004936595 1,560,859 1,568,037 RGD:9068941
G Rsph1 radial spoke head component 1 JBrowse link NW_004936500 1,402,289 1,423,398 RGD:9068941
G Txndc2 thioredoxin domain containing 2 JBrowse link NW_004936626 1,608,877 1,610,472 RGD:9068941
sperm annulus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddx6 DEAD-box helicase 6 JBrowse link NW_004936542 3,748,599 3,781,405 RGD:9068941
G Septin12 septin 12 JBrowse link NW_004936530 4,744,772 4,750,495 RGD:9068941
G Septin2 septin 2 JBrowse link NW_004936745 518,650 555,187 RGD:9068941
G Septin4 septin 4 JBrowse link NW_004936490 4,597,888 4,609,905 RGD:9068941
G Septin6 septin 6 JBrowse link NW_004936479 10,233,035 10,305,327 RGD:9068941
G Septin7 septin 7 JBrowse link NW_004936478 11,419,334 11,528,954 RGD:9068941
sperm connecting piece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap4 A-kinase anchoring protein 4 JBrowse link NW_004936721 1,692,623 1,700,256 RGD:9068941
G Capzb capping actin protein of muscle Z-line subunit beta JBrowse link NW_004936474 5,594,193 5,656,665 RGD:9068941
G Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 JBrowse link NW_004936498 3,042,151 3,055,966 RGD:9068941
G Fsip2 fibrous sheath interacting protein 2 JBrowse link NW_004936506 11,439,867 11,521,025 RGD:9068941
G Glipr1l1 GLIPR1 like 1 JBrowse link NW_004936568 3,797,783 3,824,947 RGD:9068941
G Pmfbp1 polyamine modulated factor 1 binding protein 1 JBrowse link NW_004936475 21,747,877 21,805,928 RGD:9068941
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha JBrowse link NW_004936541 7,845,876 7,863,677 RGD:9068941
G Spata6 spermatogenesis associated 6 JBrowse link NW_004936474 29,250,835 29,369,319 RGD:9068941
G Spatc1l spermatogenesis and centriole associated 1 like JBrowse link NW_004936778 354,424 369,473 RGD:9068941
G Sun5 Sad1 and UNC84 domain containing 5 JBrowse link NW_004936485 19,686,894 19,701,946 RGD:9068941
sperm end piece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap4 A-kinase anchoring protein 4 JBrowse link NW_004936721 1,692,623 1,700,256 RGD:9068941
G Cabyr calcium binding tyrosine phosphorylation regulated JBrowse link NW_004936550 3,519,470 3,545,938 RGD:9068941
G Fsip2 fibrous sheath interacting protein 2 JBrowse link NW_004936506 11,439,867 11,521,025 RGD:9068941
sperm fibrous sheath term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap14 A-kinase anchoring protein 14 JBrowse link NW_004936479 10,051,669 10,055,518 RGD:9068941
G Akap3 A-kinase anchoring protein 3 JBrowse link NW_004936606 4,771,158 4,794,666 RGD:9068941
G Akap4 A-kinase anchoring protein 4 JBrowse link NW_004936721 1,692,623 1,700,256 RGD:9068941
G Aldoa aldolase, fructose-bisphosphate A JBrowse link NW_004936501 12,418,090 12,423,959 RGD:9068941
G Cabyr calcium binding tyrosine phosphorylation regulated JBrowse link NW_004936550 3,519,470 3,545,938 RGD:9068941
G Flacc1 flagellum associated containing coiled-coil domains 1 JBrowse link NW_004936726 600,213 631,513 RGD:9068941
G Fscb fibrous sheath CABYR binding protein JBrowse link NW_004936583 4,707,636 4,710,286 RGD:9068941
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic JBrowse link NW_004936570 819,562 830,072 RGD:9068941
G Gstm3 glutathione S-transferase mu 3 JBrowse link NW_004936704 1,233,909 1,236,864 RGD:9068941
G Ldha lactate dehydrogenase A JBrowse link NW_004936528 866,607 879,977 RGD:9068941
G Nme8 NME/NM23 family member 8 JBrowse link NW_004936478 13,176,388 13,243,043 RGD:9068941
sperm midpiece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap3 A-kinase anchoring protein 3 JBrowse link NW_004936606 4,771,158 4,794,666 RGD:9068941
G Akap4 A-kinase anchoring protein 4 JBrowse link NW_004936721 1,692,623 1,700,256 RGD:9068941
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 JBrowse link NW_004936740 445,952 478,580 RGD:9068941
G Ccdc172 coiled-coil domain containing 172 JBrowse link NW_004936486 6,305,419 6,376,514 RGD:9068941
G Ccr6 C-C motif chemokine receptor 6 JBrowse link NW_004936489 16,669,297 16,689,451 RGD:9068941
G Cd55 CD55 molecule (Cromer blood group) JBrowse link NW_004936557 5,344,373 5,364,234 RGD:9068941
G Cfap69 cilia and flagella associated protein 69 JBrowse link NW_004936621 3,704,718 3,772,298 RGD:9068941
G Defb1 defensin beta 1 JBrowse link NW_004936615 4,780,229 4,790,516 RGD:9068941
G Fsip2 fibrous sheath interacting protein 2 JBrowse link NW_004936506 11,439,867 11,521,025 RGD:9068941
G Gabarap GABA type A receptor-associated protein JBrowse link NW_004936595 534,042 536,289 RGD:9068941
G Grk3 G protein-coupled receptor kinase 3 JBrowse link NW_004936657 425,902 522,331 RGD:9068941
G Hyal3 hyaluronidase 3 JBrowse link NW_004936529 1,831,639 1,837,314 RGD:9068941
G Ift172 intraflagellar transport 172 JBrowse link NW_004936493 5,108,437 5,145,160 RGD:9068941
G Ift27 intraflagellar transport 27 JBrowse link NW_004936492 4,077,957 4,089,898 RGD:9068941
G Ift81 intraflagellar transport 81 JBrowse link NW_004936558 3,177,418 3,251,439 RGD:9068941
G LOC101959351 cilia- and flagella-associated protein 65 JBrowse link NW_004936569 1,449,654 1,462,582 RGD:9068941
G LOC101968921 angiotensin-converting enzyme JBrowse link NW_004936541 4,157,847 4,178,156 RGD:9068941
G Lyzl6 lysozyme like 6 JBrowse link NW_004936541 1,801,350 1,804,767 RGD:9068941
G Mroh2b maestro heat like repeat family member 2B JBrowse link NW_004936518 1,593,156 1,665,577 RGD:9068941
G Pacrg parkin coregulated JBrowse link NW_004936489 13,328,143 13,787,329 RGD:9068941
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link NW_004936659 2,750,015 2,765,914 RGD:9068941
G Ptchd3 patched domain containing 3 JBrowse link NW_004936613 1,814,805 1,851,094 RGD:9068941
G Rabl2b RAB, member of RAS oncogene family like 2B JBrowse link NW_004936629 60,924 75,273 RGD:9068941
G Slc26a3 solute carrier family 26 member 3 JBrowse link NW_004936479 16,350,746 16,374,911 RGD:9068941
G Slc26a6 solute carrier family 26 member 6 JBrowse link NW_004936529 425,839 435,590 RGD:9068941
G Slc9a3r1 SLC9A3 regulator 1 JBrowse link NW_004936594 119,808 136,620 RGD:9068941
G Spef2 sperm flagellar 2 JBrowse link NW_004936518 5,901,076 6,072,012 RGD:9068941
G Sqstm1 sequestosome 1 JBrowse link NW_004936739 943,080 955,296 RGD:9068941
G Tacr1 tachykinin receptor 1 JBrowse link NW_004936556 1,266,621 1,421,271 RGD:9068941
G Tacr2 tachykinin receptor 2 JBrowse link NW_004936521 9,053,179 9,065,790 RGD:9068941
G Tcp11 t-complex 11 JBrowse link NW_004936476 24,063,854 24,080,677 RGD:9068941
G Vps13a vacuolar protein sorting 13 homolog A JBrowse link NW_004936503 12,606,019 12,857,807 RGD:9068941
sperm mitochondrial sheath term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ak2 adenylate kinase 2 JBrowse link NW_004936474 15,887,014 15,908,522 RGD:9068941
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 JBrowse link NW_004936835 316,767 321,999 RGD:9068941
sperm principal piece term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap3 A-kinase anchoring protein 3 JBrowse link NW_004936606 4,771,158 4,794,666 RGD:9068941
G Akap4 A-kinase anchoring protein 4 JBrowse link NW_004936721 1,692,623 1,700,256 RGD:9068941
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 JBrowse link NW_004936567 944,825 1,039,920 RGD:9068941
G Cabyr calcium binding tyrosine phosphorylation regulated JBrowse link NW_004936550 3,519,470 3,545,938 RGD:9068941
G Catsper4 cation channel sperm associated 4 JBrowse link NW_004936474 10,707,630 10,719,367 RGD:9068941
G Catsperd cation channel sperm associated auxiliary subunit delta JBrowse link NW_004936588 3,287,334 3,327,748 RGD:9068941
G Catspere catsper channel auxiliary subunit epsilon JBrowse link NW_004936526 6,188,189 6,340,523 RGD:9068941
G Catsperz catsper channel auxiliary subunit zeta JBrowse link NW_004936599 4,907,039 4,910,396 RGD:9068941
G Ccr6 C-C motif chemokine receptor 6 JBrowse link NW_004936489 16,669,297 16,689,451 RGD:9068941
G Dnah8 dynein axonemal heavy chain 8 JBrowse link NW_004936476 20,592,440 20,888,692 RGD:9068941
G Efcab2 EF-hand calcium binding domain 2 JBrowse link NW_004936526 5,799,212 5,877,183 RGD:9068941
G Efcab9 EF-hand calcium binding domain 9 JBrowse link NW_004936609 3,082,136 3,086,721 RGD:9068941
G Enkur enkurin, TRPC channel interacting protein JBrowse link NW_004936484 679,541 700,898 RGD:9068941
G Eno4 enolase 4 JBrowse link NW_004936486 6,760,400 6,785,098 RGD:9068941
G Fscb fibrous sheath CABYR binding protein JBrowse link NW_004936583 4,707,636 4,710,286 RGD:9068941
G Fsip2 fibrous sheath interacting protein 2 JBrowse link NW_004936506 11,439,867 11,521,025 RGD:9068941
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic JBrowse link NW_004936570 819,562 830,072 RGD:9068941
G Hk1 hexokinase 1 JBrowse link NW_004936521 9,067,062 9,139,112 RGD:9068941
G Ift172 intraflagellar transport 172 JBrowse link NW_004936493 5,108,437 5,145,160 RGD:9068941
G Ift27 intraflagellar transport 27 JBrowse link NW_004936492 4,077,957 4,089,898 RGD:9068941
G Ift81 intraflagellar transport 81 JBrowse link NW_004936558 3,177,418 3,251,439 RGD:9068941
G Kif2a kinesin family member 2A JBrowse link NW_004936480 6,324,214 6,357,696 RGD:9068941
G Nme8 NME/NM23 family member 8 JBrowse link NW_004936478 13,176,388 13,243,043 RGD:9068941
G Pfkm phosphofructokinase, muscle JBrowse link NW_004936512 6,006,247 6,031,939 RGD:9068941
G Ropn1 rhophilin associated tail protein 1 JBrowse link NW_004936725 1,254,973 1,267,143 RGD:9068941
G Scnn1a sodium channel epithelial 1 alpha subunit JBrowse link NW_004936709 1,377,852 1,403,398 RGD:9068941
G Slc9b1 solute carrier family 9 member B1 JBrowse link NW_004936520 405,239 466,280 RGD:9068941
G Slc9b2 solute carrier family 9 member B2 JBrowse link NW_004936520 316,070 371,590 RGD:9068941
G Spag6 sperm associated antigen 6 JBrowse link NW_004936520 5,628,576 5,693,590 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12051
    cellular anatomical entity 11882
      organelle 9316
        cilium 564
          motile cilium 182
            9+2 motile cilium 142
              sperm flagellum 131
                outer dense fiber 11
                sperm annulus 6
                sperm connecting piece 10
                sperm end piece 3
                sperm fibrous sheath 11
                sperm midpiece 32
                sperm mitochondrial sheath 2
                sperm principal piece 29
Path 2
Term Annotations click to browse term
  cellular_component 12051
    cellular anatomical entity 11882
      cell projection 2030
        plasma membrane bounded cell projection 2003
          cilium 564
            motile cilium 182
              9+2 motile cilium 142
                sperm flagellum 131
                  outer dense fiber 11
                  sperm annulus 6
                  sperm connecting piece 10
                  sperm end piece 3
                  sperm fibrous sheath 11
                  sperm midpiece 32
                  sperm mitochondrial sheath 2
                  sperm principal piece 29
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.