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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to decreased oxygen levels
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Accession:GO:0036294 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting a decline in the level of oxygen.
Comment:This term should be used when a decrease in oxygen levels is not considered a stress response. For a hypoxic stress response, consider instead 'cellular response to hypoxia ; GO:0071456'.
Synonyms:exact_synonym: cellular response to lowered oxygen levels


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cellular response to decreased oxygen levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193
JBrowse link
G CPEB4 cytoplasmic polyadenylation element binding protein 4 ISO PMID:20937770 UniProt PMID:20937770 RGD:8553637 NCBI chr 4:38,604,065...38,665,200
Ensembl chr 4:38,607,948...38,664,821
JBrowse link
G MIR142 microRNA mir-142 ISO (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr 9:32,977,393...32,977,455
Ensembl chr 9:32,977,382...32,977,468
JBrowse link
G MIR150 microRNA mir-150 ISO (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr 1:106,998,756...106,998,812
Ensembl chr 1:106,998,756...106,998,812
JBrowse link
G MIR15B microRNA mir-15b ISO (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr34:26,460,663...26,460,722
Ensembl chr34:26,460,645...26,460,741
JBrowse link
G MIR17 microRNA mir-17 ISO (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr22:42,478,013...42,478,071
Ensembl chr22:42,478,000...42,478,083
JBrowse link
G MIR199-1 microRNA mir-199-1 ISO (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr20:50,410,924...50,410,984
Ensembl chr20:50,410,913...50,410,994
JBrowse link
G MIR199-2 microRNA mir-199-2 ISO (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr 7:26,812,766...26,812,824
Ensembl chr 7:26,812,735...26,812,838
JBrowse link
G MIR199-3 microRNA mir-199-3 ISO (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr 9:55,262,354...55,262,412
Ensembl chr 9:55,262,328...55,262,437
JBrowse link
G MIR204 microRNA mir-204 ISO (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr 1:86,818,494...86,818,553
Ensembl chr 1:86,818,489...86,818,556
JBrowse link
G MIR20B microRNA mir-20b ISO (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr  X:104,896,091...104,896,158
Ensembl chr  X:104,896,091...104,896,158
JBrowse link
G MIR21 microRNA mir-21 ISO (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr 9:34,340,550...34,340,609
Ensembl chr 9:34,340,533...34,340,624
JBrowse link
G MIR221 microRNA mir-221 ISO (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr  X:39,523,890...39,523,951
Ensembl chr  X:39,523,885...39,523,954
JBrowse link
G MIR222 microRNA mir-222 ISO (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr  X:39,524,519...39,524,608
Ensembl chr  X:39,524,519...39,524,608
JBrowse link
G MIR223 microRNA mir-223 ISO (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr  X:50,838,131...50,838,233
Ensembl chr  X:50,838,131...50,838,233
JBrowse link
G MIR31 microRNA mir-31 ISO (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr11:40,904,438...40,904,496
Ensembl chr11:40,904,437...40,904,503
JBrowse link
G MIR491 microRNA mir-491 ISO (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr11:40,300,967...40,301,020
Ensembl chr11:40,300,951...40,301,034
JBrowse link
G PICK1 protein interacting with PRKCA 1 ISO PMID:23843614 UniProt PMID:23843614 RGD:8553949 NCBI chr10:26,595,301...26,614,170
Ensembl chr10:26,595,768...26,613,756
JBrowse link
G PTEN phosphatase and tensin homolog ISO (MGI:MGI:5584033|PMID:24875179) MGI PMID:24875179 MGI:MGI:5584033 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176
JBrowse link
cellular response to anoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFTR CF transmembrane conductance regulator ISO RGD PMID:14975182 RGD:1599599 NCBI chr14:56,290,417...56,452,919
Ensembl chr14:56,290,275...56,453,977
JBrowse link
G DAXX death domain associated protein ISO RGD PMID:17289031 RGD:9587773 NCBI chr12:2,755,960...2,760,687
Ensembl chr12:2,755,960...2,761,340
JBrowse link
G EEF2K eukaryotic elongation factor 2 kinase ISO RGD PMID:12194824 RGD:8553742 NCBI chr 6:23,368,296...23,433,853
Ensembl chr 6:23,371,546...23,433,929
JBrowse link
cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAA2 acetyl-CoA acyltransferase 2 ISO (PMID:18371312) BHF-UCL PMID:18371312 NCBI chr 7:79,028,636...79,057,720 JBrowse link
G ADAM8 ADAM metallopeptidase domain 8 ISO (PMID:18566576) BHF-UCL PMID:18566576 NCBI chr28:40,853,665...40,865,604
Ensembl chr28:40,855,509...40,863,747
JBrowse link
G ADRB2 adrenoceptor beta 2 ISO RGD PMID:19098126 RGD:8548506 NCBI chr 4:60,048,502...60,050,447
Ensembl chr 4:59,941,517...60,050,298
JBrowse link
G AK4 adenylate kinase 4 IEA Ensembl GO_REF:0000107 NCBI chr 5:45,055,294...45,119,595
Ensembl chr 5:44,884,283...45,120,203
JBrowse link
G AKT1 AKT serine/threonine kinase 1 ISO RGD PMID:20515660 RGD:5509097 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193
JBrowse link
G ANGPT4 angiopoietin 4 IEA Ensembl GO_REF:0000107 NCBI chr24:20,021,625...20,068,805
Ensembl chr24:20,022,322...20,064,023
JBrowse link
G ANKRD1 ankyrin repeat domain 1 ISO RGD PMID:19299913 RGD:5133278 NCBI chr28:5,569,120...5,578,393
Ensembl chr28:5,569,501...5,601,956
JBrowse link
G AQP1 aquaporin 1 (Colton blood group) ISS UniProtKB GO_REF:0000024 NCBI chr14:43,592,266...43,603,903
Ensembl chr14:43,578,721...43,605,720
JBrowse link
G AQP3 aquaporin 3 ISO (PMID:24462679) MGI PMID:24462679 NCBI chr11:50,517,509...50,524,565 JBrowse link
G ASL argininosuccinate lyase ISO RGD PMID:11097477 RGD:1599264 NCBI chr 6:768,522...779,144
Ensembl chr 6:730,358...779,424
JBrowse link
G ATP7A ATPase copper transporting alpha ISO RGD PMID:21346155 RGD:11341705 NCBI chr  X:60,203,336...60,356,525
Ensembl chr  X:60,203,270...60,352,869
JBrowse link
G B3GAT1 beta-1,3-glucuronyltransferase 1 ISO RGD PMID:21400481 RGD:14390075 NCBI chr 5:741,231...747,641
Ensembl chr 5:745,747...748,899
JBrowse link
G BAD BCL2 associated agonist of cell death IEA Ensembl GO_REF:0000107 NCBI chr18:52,781,335...52,791,789
Ensembl chr18:52,781,921...52,791,405
JBrowse link
G BBC3 BCL2 binding component 3 ISO (PMID:20810912) UniProtKB PMID:20810912 NCBI chr 1:108,742,793...108,750,832 JBrowse link
G BCL2 BCL2 apoptosis regulator IEA Ensembl GO_REF:0000107 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658
JBrowse link
G BCL2L1 BCL2 like 1 ISO with serum deprivation RGD PMID:20669351 RGD:11353793 NCBI chr24:21,145,214...21,209,425
Ensembl chr24:21,145,215...21,196,355
JBrowse link
G BDKRB2 bradykinin receptor B2 ISO RGD PMID:19565561 RGD:4891057 NCBI chr 8:64,974,588...65,005,682
Ensembl chr 8:64,974,997...65,003,407
JBrowse link
G BNIP3 BCL2 interacting protein 3 ISO (PMID:19273585)
(PMID:20436456)
RGD
MGI
BHF-UCL
PMID:17379825, PMID:19273585, PMID:20436456 RGD:9685412 NCBI chr28:40,037,681...40,050,499
Ensembl chr28:40,038,643...40,049,797
JBrowse link
G BNIP3L BCL2 interacting protein 3 like ISO (PMID:19273585) MGI PMID:19273585 NCBI chr25:31,133,512...31,149,750 JBrowse link
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 ISO RGD PMID:12511571 RGD:11251702 NCBI chr 9:34,804,285...34,984,640
Ensembl chr 9:34,806,535...34,983,788
JBrowse link
G CASR calcium sensing receptor ISO RGD PMID:21073657 RGD:7206834 NCBI chr33:25,340,822...25,432,814
Ensembl chr33:25,405,846...25,432,559
JBrowse link
G CBS cystathionine beta-synthase ISO PMID:20149843 UniProt PMID:20149843 RGD:8554341 NCBI chr31:37,230,900...37,247,170 JBrowse link
G CCNA2 cyclin A2 ISO RGD PMID:25289051 RGD:10054493 NCBI chr19:18,317,866...18,324,592
Ensembl chr19:18,318,004...18,323,691
JBrowse link
G CCNB1 cyclin B1 ISO RGD PMID:12374461 RGD:2316579 NCBI chr 2:54,256,957...54,264,749 JBrowse link
G CFLAR CASP8 and FADD like apoptosis regulator ISO RGD PMID:12031707 RGD:8663470 NCBI chr37:10,268,407...10,307,803
Ensembl chr37:10,268,582...10,345,095
JBrowse link
G CLCA1 chloride channel accessory 1 ISO RGD PMID:18616988 RGD:4188872 NCBI chr 6:61,620,755...61,650,111
Ensembl chr 6:61,620,995...61,650,083
JBrowse link
G COX4I2 cytochrome c oxidase subunit 4I2 ISO RGD PMID:23303788 RGD:11344908 NCBI chr24:21,122,033...21,128,368
Ensembl chr24:21,120,213...21,128,320
JBrowse link
G CPEB1 cytoplasmic polyadenylation element binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:54,405,140...54,499,614
Ensembl chr 3:54,405,717...54,500,221
JBrowse link
G CPEB2 cytoplasmic polyadenylation element binding protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:65,200,175...65,277,353
Ensembl chr 3:65,203,759...65,267,967
JBrowse link
G CYBB cytochrome b-245 beta chain ISO RGD PMID:21302291 RGD:11040609 NCBI chr  X:32,533,365...32,568,149
Ensembl chr  X:32,533,320...32,568,217
JBrowse link
G DNMT3A DNA methyltransferase 3 alpha ISO RGD PMID:24282625 RGD:9589039 NCBI chr17:19,489,524...19,563,074
Ensembl chr17:19,492,193...19,563,902
JBrowse link
G DRD1 dopamine receptor D1 ISO RGD PMID:20969567 RGD:7248614 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287
JBrowse link
G E2F1 E2F transcription factor 1 ISO RGD PMID:19088195 RGD:2316261 NCBI chr24:22,895,149...22,904,689
Ensembl chr24:22,878,402...22,904,656
JBrowse link
G EDN1 endothelin 1 ISO RGD PMID:9551744 RGD:8662285 NCBI chr35:11,808,892...11,815,383
Ensembl chr35:11,808,892...11,815,383
JBrowse link
G EGLN1 egl-9 family hypoxia inducible factor 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:8,053,486...8,110,791
Ensembl chr 4:8,053,837...8,109,325
JBrowse link
G EGLN2 egl-9 family hypoxia inducible factor 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:112,992,779...113,001,836
Ensembl chr 1:112,992,780...113,000,677
JBrowse link
G EGLN3 egl-9 family hypoxia inducible factor 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:12,873,755...12,901,728
Ensembl chr 8:12,875,387...12,901,709
JBrowse link
G EGR1 early growth response 1 ISO RGD PMID:21220915 RGD:5131857 NCBI chr11:26,046,195...26,049,806
Ensembl chr11:26,046,228...26,048,575
JBrowse link
G EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 ISO RGD PMID:10100614 RGD:10401146 NCBI chr16:27,389,850...27,410,154
Ensembl chr16:27,390,181...27,410,110
JBrowse link
G ELN elastin ISO RGD PMID:16055482 RGD:9585727 NCBI chr 6:6,299,524...6,331,425
Ensembl chr 6:6,300,727...6,331,325
JBrowse link
G ENDOG endonuclease G ISO RGD PMID:17379825 RGD:9685412 NCBI chr 9:54,809,470...54,812,795
Ensembl chr 9:54,809,530...54,813,042
JBrowse link
G ENO1 enolase 1 ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chr 5:62,300,805...62,314,508
Ensembl chr 5:62,300,808...62,304,093
JBrowse link
G EPAS1 endothelial PAS domain protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:48,550,836...48,636,776
Ensembl chr10:48,551,410...48,634,844
JBrowse link
G ERO1A endoplasmic reticulum oxidoreductase 1 alpha ISO RGD PMID:12752442 RGD:10401130 NCBI chr 8:28,864,642...28,913,864
Ensembl chr 8:28,864,925...28,914,368
JBrowse link
G FABP1 fatty acid binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr17:38,242,119...38,247,969
Ensembl chr17:38,242,119...38,247,962
JBrowse link
G FAM162A family with sequence similarity 162 member A IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr33:25,525,408...25,552,272
Ensembl chr33:25,525,411...25,552,256
JBrowse link
G FAS Fas cell surface death receptor ISO RGD PMID:12031707 RGD:8663470 NCBI chr26:38,738,811...38,763,298
Ensembl chr26:38,737,611...38,763,321
JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 ISO RGD PMID:11981751 RGD:634296 NCBI chr25:11,231,958...11,410,379
Ensembl chr25:11,231,737...11,407,621
JBrowse link
G FMN2 formin 2 ISO (PMID:23375502) UniProtKB PMID:23375502 NCBI chr 7:31,657,371...32,024,777
Ensembl chr 7:31,697,245...32,023,472
JBrowse link
G FNDC1 fibronectin type III domain containing 1 ISO PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chr 1:48,501,657...48,602,962
Ensembl chr 1:48,501,355...48,602,336
JBrowse link
G FOXO3 forkhead box O3 ISO RGD PMID:24278276 RGD:10402204 NCBI chr12:65,552,455...65,673,467
Ensembl chr12:65,552,310...65,670,198
JBrowse link
G GATA6 GATA binding protein 6 ISO (PMID:21127043) UniProtKB PMID:21127043 NCBI chr 7:65,932,114...65,962,574 JBrowse link
G GNB1 G protein subunit beta 1 ISO PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chr 5:56,777,854...56,879,619
Ensembl chr 5:56,779,354...56,817,295
JBrowse link
G GNGT1 G protein subunit gamma transducin 1 ISO PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chr14:19,081,676...19,420,261
Ensembl chr14:19,415,510...19,420,255
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692
JBrowse link
G HIF3A hypoxia inducible factor 3 subunit alpha NOT ISO (PMID:11573933) UniProtKB PMID:11573933 NCBI chr 1:109,479,456...109,504,271
Ensembl chr 1:109,479,128...109,504,274
JBrowse link
G HIGD1A HIG1 hypoxia inducible domain family member 1A ISO (MGI:MGI:3654896|PMID:16815968), (MGI:MGI:5306879|PMID:21856340)
(MGI:MGI:5643884|PMID:25683712)
MGI PMID:16815968, PMID:21856340, PMID:25683712 MGI:MGI:3654896, MGI:MGI:5306879, MGI:MGI:5643884 NCBI chr23:11,893,117...11,903,934 JBrowse link
G HILPDA hypoxia inducible lipid droplet associated ISO (PMID:10690527) UniProtKB PMID:10690527 NCBI chr14:7,957,811...7,959,878 JBrowse link
G HMOX1 heme oxygenase 1 IEA Ensembl GO_REF:0000107 NCBI chr10:28,744,404...28,751,544
Ensembl chr10:28,743,795...28,751,773
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha ISO RGD PMID:24177414 RGD:10445837 NCBI chr24:31,847,864...31,908,337
Ensembl chr24:31,847,961...31,905,916
JBrowse link
G HP1BP3 heterochromatin protein 1 binding protein 3 ISO (PMID:25100860) UniProtKB PMID:25100860 NCBI chr 2:78,164,239...78,203,032
Ensembl chr 2:78,164,173...78,201,555
JBrowse link
G HYOU1 hypoxia up-regulated 1 NAS
IEA
IBA
(PMID:10837345)
(PMID:21873635)
ParkinsonsUK-UCL
Ensembl
GO_Central
PMID:10837345, PMID:21873635 GO_REF:0000107 NCBI chr 5:14,795,750...14,808,203
Ensembl chr 5:14,795,750...14,807,262
JBrowse link
G ICAM1 intercellular adhesion molecule 1 ISO RGD PMID:20631551 RGD:8662392 NCBI chr20:50,818,715...50,827,914
Ensembl chr20:50,818,715...50,827,914
JBrowse link
G IL7 interleukin 7 ISO RGD PMID:19055876 RGD:10402937 NCBI chr29:26,384,493...26,422,586
Ensembl chr29:26,384,493...26,422,737
JBrowse link
G IRAK1 interleukin 1 receptor associated kinase 1 ISO RGD PMID:15793310 RGD:1579809 NCBI chr  X:121,853,340...121,862,582
Ensembl chr  X:121,819,432...121,862,576
JBrowse link
G IREB2 iron responsive element binding protein 2 ISO RGD PMID:22159112 RGD:6893269 NCBI chr13:38,398,445...38,441,128
Ensembl chr13:38,400,591...38,441,015
JBrowse link
G ITPR1 inositol 1,4,5-trisphosphate receptor type 1 ISO RGD PMID:17285299 RGD:6482794 NCBI chr20:12,746,171...13,065,256
Ensembl chr20:12,747,315...13,064,198
JBrowse link
G ITPR2 inositol 1,4,5-trisphosphate receptor type 2 ISO RGD PMID:17285299 RGD:6482794 NCBI chr27:20,806,670...21,278,638
Ensembl chr27:20,805,842...21,350,083
JBrowse link
G KCNK2 potassium two pore domain channel subfamily K member 2 ISO RGD PMID:24705172 RGD:9831164 NCBI chr 7:12,893,654...13,092,319
Ensembl chr 7:12,894,149...13,090,110
JBrowse link
G KCNK3 potassium two pore domain channel subfamily K member 3 ISO RGD PMID:12215606 RGD:2316539 NCBI chr17:20,732,779...20,771,104
Ensembl chr17:20,732,819...20,768,730
JBrowse link
G KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 ISO RGD PMID:19461047 RGD:10412041 NCBI chr 4:41,536,841...41,545,523
Ensembl chr 4:41,537,225...41,545,344
JBrowse link
G LMNA lamin A/C IEA Ensembl GO_REF:0000107 NCBI chr 7:41,702,491...41,719,870
Ensembl chr 7:41,508,450...41,746,931
JBrowse link
G LOC479901 ATP synthase F(0) complex subunit B1, mitochondrial ISO RGD PMID:29300489 RGD:13792656 NCBI chr 6:40,613,504...40,626,068
Ensembl chr 6:40,613,415...40,625,979
JBrowse link
G LOC607881 potassium voltage-gated channel subfamily D member 2-like ISO PMID:25352783 UniProt PMID:25352783 RGD:10047379
G MDM2 MDM2 proto-oncogene IEA Ensembl GO_REF:0000107 NCBI chr10:10,936,288...10,963,118
Ensembl chr10:10,893,719...10,962,596
JBrowse link
G MDM4 MDM4 regulator of p53 IEA Ensembl GO_REF:0000107 NCBI chr38:1,055,978...1,122,348
Ensembl chr38:1,056,109...1,107,166
JBrowse link
G MFN1 mitofusin 1 ISO RGD PMID:27833818 RGD:12910766 NCBI chr34:12,785,799...12,816,881
Ensembl chr34:12,785,856...12,815,994
JBrowse link
G MFN2 mitofusin 2 ISO RGD PMID:28478070 RGD:12910733 NCBI chr 2:84,284,719...84,310,715
Ensembl chr 2:84,284,719...84,308,225
JBrowse link
G MGARP mitochondria localized glutamic acid rich protein ISO (MGI:MGI:3850758|PMID:19528298) UniProtKB PMID:19528298 MGI:MGI:3850758 NCBI chr19:3,411,718...3,423,589
Ensembl chr19:3,411,778...3,423,330
JBrowse link
G MIEF1 mitochondrial elongation factor 1 ISO RGD PMID:25911325 RGD:12880381 NCBI chr10:25,534,231...25,548,565
Ensembl chr10:25,536,288...25,546,369
JBrowse link
G MIR199-2 microRNA mir-199-2 ISO (MGI:MGI:5528778|PMID:24011070) MGI PMID:24011070 MGI:MGI:5528778 NCBI chr 7:26,812,766...26,812,824
Ensembl chr 7:26,812,735...26,812,838
JBrowse link
G MIR214 microRNA mir-214 ISO (MGI:MGI:5528778|PMID:24011070) MGI PMID:24011070 MGI:MGI:5528778 NCBI chr 7:26,818,559...26,818,668
Ensembl chr 7:26,818,559...26,818,670
JBrowse link
G MIR223 microRNA mir-223 ISO RGD PMID:29608885 RGD:21408565 NCBI chr  X:50,838,131...50,838,233
Ensembl chr  X:50,838,131...50,838,233
JBrowse link
G MPL MPL proto-oncogene, thrombopoietin receptor ISO RGD PMID:15642952 RGD:10449018 NCBI chr15:16,815,102...16,825,321
Ensembl chr15:16,815,294...16,825,350
JBrowse link
G MST1 macrophage stimulating 1 ISO RGD PMID:23647599 RGD:10448278 NCBI chr20:39,582,237...39,586,958
Ensembl chr20:39,582,282...39,586,908
JBrowse link
G MT3 metallothionein 3 IEA Ensembl GO_REF:0000107 Ensembl chr 2:59,624,849...59,626,424 JBrowse link
G MTOR mechanistic target of rapamycin kinase IEA Ensembl GO_REF:0000107 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO (PMID:15459207) CAFA PMID:15459207 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309
JBrowse link
G MYOCD myocardin ISO RGD PMID:20621093 RGD:5132874 NCBI chr 5:36,674,476...36,774,435
Ensembl chr 5:36,674,300...36,769,327
JBrowse link
G NDNF neuron derived neurotrophic factor IEA Ensembl GO_REF:0000107 NCBI chr19:19,009,966...19,053,047
Ensembl chr19:19,036,372...19,049,937
JBrowse link
G NDRG1 N-myc downstream regulated 1 IEA Ensembl GO_REF:0000107 NCBI chr13:29,689,294...29,745,964
Ensembl chr13:29,650,444...29,746,382
JBrowse link
G NFE2L2 nuclear factor, erythroid 2 like 2 ISO RGD PMID:23904790 RGD:10412703 NCBI chr36:20,989,205...21,087,044
Ensembl chr36:20,989,360...21,012,524
JBrowse link
G NKX3-1 NK3 homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr25:33,815,343...33,817,465
Ensembl chr25:33,815,095...33,817,474
JBrowse link
G NOG noggin ISO RGD PMID:25740156 RGD:12801489 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NOP53 NOP53 ribosome biogenesis factor IEA Ensembl GO_REF:0000107 NCBI chr 1:108,307,039...108,315,732
Ensembl chr 1:108,307,042...108,316,495
JBrowse link
G NPEPPS aminopeptidase puromycin sensitive IEA Ensembl GO_REF:0000107 NCBI chr 9:23,866,977...23,971,930
Ensembl chr 9:23,866,990...23,972,231
JBrowse link
G NPM1 nucleophosmin 1 ISO RGD PMID:21444791 RGD:11535018 NCBI chr 4:40,756,464...40,770,174
Ensembl chr 4:40,756,465...40,770,175
JBrowse link
G OPA1 OPA1 mitochondrial dynamin like GTPase ISO RGD PMID:27833818 RGD:12910766 NCBI chr23:52,068,123...52,154,410
Ensembl chr23:52,068,118...52,151,593
JBrowse link
G OPRD1 opioid receptor delta 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:71,685,129...71,721,692
Ensembl chr 2:71,689,084...71,721,875
JBrowse link
G P4HB prolyl 4-hydroxylase subunit beta IEA Ensembl GO_REF:0000107 NCBI chr 9:427,827...436,880
Ensembl chr 9:427,830...436,064
JBrowse link
G PALLD palladin, cytoskeletal associated protein ISO RGD PMID:16481593 RGD:2325785 NCBI chr25:19,147,310...19,568,712
Ensembl chr25:19,146,898...19,553,679
JBrowse link
G PCK1 phosphoenolpyruvate carboxykinase 1 ISO RGD PMID:24177414 RGD:10445837 NCBI chr24:42,538,858...42,544,200
Ensembl chr24:42,538,882...42,544,198
JBrowse link
G PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase ISO RGD PMID:23647599 RGD:10448278 NCBI chr 1:40,494,441...40,539,453
Ensembl chr 1:40,494,461...40,538,937
JBrowse link
G PGK1 phosphoglycerate kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr  X:60,374,743...60,396,244
Ensembl chr  X:60,374,754...60,423,947
JBrowse link
G PHB2 prohibitin 2 ISO RGD PMID:25031298 RGD:12903263 NCBI chr27:38,075,769...38,080,440
Ensembl chr27:38,075,652...38,080,109
JBrowse link
G PINK1 PTEN induced kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:78,276,091...78,293,761
Ensembl chr 2:78,277,077...78,294,123
JBrowse link
G PLAU plasminogen activator, urokinase ISO RGD PMID:19490965 RGD:7241802 NCBI chr 4:24,329,139...24,333,893
Ensembl chr 4:24,328,925...24,334,851
JBrowse link
G PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:16,469,793...16,472,910
Ensembl chr 1:16,469,793...16,472,910
JBrowse link
G PPARD peroxisome proliferator activated receptor delta IEA Ensembl GO_REF:0000107 NCBI chr12:4,492,867...4,579,340
Ensembl chr12:4,492,672...4,579,340
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:22527940 RGD:7242177 NCBI chr 3:85,645,942...86,284,570
Ensembl chr 3:86,016,140...86,281,269
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 ISO RGD PMID:17720864 RGD:2316813 NCBI chr 4:68,579,061...68,614,548
Ensembl chr 4:68,579,037...68,611,841
JBrowse link
G PRKCE protein kinase C epsilon IEA Ensembl GO_REF:0000107 NCBI chr10:47,976,929...48,464,614
Ensembl chr10:47,976,768...48,535,296
JBrowse link
G PTEN phosphatase and tensin homolog IEA Ensembl GO_REF:0000107 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176
JBrowse link
G PTGIS prostaglandin I2 synthase ISS UniProt GO_REF:0000024 NCBI chr24:36,129,091...36,162,525
Ensembl chr24:36,132,173...36,162,509
JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 IEA Ensembl GO_REF:0000107 NCBI chr 7:19,668,079...19,674,903
Ensembl chr 7:19,668,082...19,674,903
JBrowse link
G PTN pleiotrophin ISO RGD PMID:16226713, PMID:17925408 RGD:10044023, RGD:9834996 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814
JBrowse link
G RGCC regulator of cell cycle ISO (PMID:19652095) BHF-UCL PMID:19652095 NCBI chr22:9,199,204...9,209,297 JBrowse link
G RNF146 ring finger protein 146 ISO RGD PMID:26218637 RGD:13524866 NCBI chr 1:65,988,600...66,010,873
Ensembl chr 1:65,988,656...66,010,881
JBrowse link
G RORA RAR related orphan receptor A IEA Ensembl GO_REF:0000107 NCBI chr30:25,315,974...26,026,708
Ensembl chr30:25,325,275...26,026,623
JBrowse link
G RTN4 reticulon 4 ISO (MGI:MGI:6274961|PMID:27763637) UniProt PMID:27763637 MGI:MGI:6274961 NCBI chr10:55,884,452...55,954,476
Ensembl chr10:55,885,125...55,936,574
JBrowse link
G S100B S100 calcium binding protein B ISO RGD PMID:19910580 RGD:2325647 NCBI chr31:39,783,990...39,788,289
Ensembl chr31:39,784,506...39,788,183
JBrowse link
G SCN2A sodium voltage-gated channel alpha subunit 2 ISO PMID:28029095 UniProt PMID:28029095 RGD:14390052 NCBI chr36:10,472,496...10,605,055
Ensembl chr36:10,472,361...10,602,685
JBrowse link
G SDHD succinate dehydrogenase complex subunit D IEA Ensembl GO_REF:0000107 NCBI chr 5:21,030,295...21,041,125 JBrowse link
G SERPINE1 serpin family E member 1 ISO RGD PMID:10590062 RGD:8547811 NCBI chr 6:8,719,547...8,727,160
Ensembl chr 6:8,720,825...8,726,301
JBrowse link
G SFRP1 secreted frizzled related protein 1 ISO (PMID:11932307) UniProtKB PMID:11932307 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964
JBrowse link
G SIRT1 sirtuin 1 ISO (PMID:20620956) UniProtKB PMID:20620956 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279
JBrowse link
G SIRT2 sirtuin 2 ISO (PMID:24681946) UniProtKB PMID:24681946 NCBI chr 1:114,224,922...114,235,041
Ensembl chr 1:114,224,900...114,234,583
JBrowse link
G SIRT4 sirtuin 4 ISO RGD PMID:24029877 RGD:9586053 NCBI chr26:16,228,831...16,244,104
Ensembl chr26:16,234,710...16,240,012
JBrowse link
G SLC11A2 solute carrier family 11 member 2 ISO RGD PMID:21325818 RGD:5688411 NCBI chr27:3,788,785...3,823,852
Ensembl chr27:3,787,855...3,822,672
JBrowse link
G SLC29A1 solute carrier family 29 member 1 (Augustine blood group) ISO RGD PMID:10646513 RGD:1598899 NCBI chr12:12,632,233...12,644,669
Ensembl chr12:12,634,194...12,644,667
JBrowse link
G SLC2A4 solute carrier family 2 member 4 ISO RGD PMID:20868366 RGD:7349316 NCBI chr 5:32,238,095...32,244,022
Ensembl chr 5:32,238,095...32,244,021
JBrowse link
G SLC8A1 solute carrier family 8 member A1 ISO RGD PMID:17394575 RGD:1642726 NCBI chr17:32,004,207...32,381,399
Ensembl chr17:32,005,245...32,307,700
JBrowse link
G SLC8A3 solute carrier family 8 member A3 IEA Ensembl GO_REF:0000107 NCBI chr 8:43,780,363...43,926,142
Ensembl chr 8:43,781,120...43,926,343
JBrowse link
G SLC9A1 solute carrier family 9 member A1 ISO RGD PMID:20868366 RGD:7349316 NCBI chr 2:73,054,742...73,103,364
Ensembl chr 2:73,054,742...73,103,364
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:20380727 RGD:2324980 NCBI chr24:25,982,499...26,019,748
Ensembl chr24:25,999,048...26,018,077
JBrowse link
G STC1 stanniocalcin 1 ISO RGD PMID:15485913 RGD:2324700 NCBI chr25:33,615,436...33,628,138
Ensembl chr25:33,615,451...33,625,218
JBrowse link
G STC2 stanniocalcin 2 ISO RGD PMID:15485913 RGD:2324700 NCBI chr 4:39,151,951...39,165,514
Ensembl chr 4:39,152,503...39,162,343
JBrowse link
G STUB1 STIP1 homology and U-box containing protein 1 ISO PMID:19953350 ARUK-UCL PMID:19953350 RGD:13507303 NCBI chr 6:39,893,492...39,895,385
Ensembl chr 6:39,893,670...39,897,573
JBrowse link
G SUV39H1 suppressor of variegation 3-9 homolog 1 IEA Ensembl GO_REF:0000107 NCBI chr  X:41,894,623...41,907,854
Ensembl chr  X:41,893,045...41,906,403
JBrowse link
G SUV39H2 suppressor of variegation 3-9 homolog 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:21,715,677...21,749,732
Ensembl chr 2:21,728,964...21,749,597
JBrowse link
G TBL2 transducin beta like 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:6,656,158...6,664,900
Ensembl chr 6:6,656,035...6,660,963
JBrowse link
G TERT telomerase reverse transcriptase IEA Ensembl GO_REF:0000107 NCBI chr34:11,288,622...11,307,790
Ensembl chr34:11,288,622...11,307,951
JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase IEA Ensembl GO_REF:0000107 NCBI chr27:40,521,751...40,549,304
Ensembl chr27:40,523,314...40,549,332
JBrowse link
G TP53 tumor protein p53 ISO (PMID:20810912) UniProtKB PMID:20810912 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109
JBrowse link
G TRPC1 transient receptor potential cation channel subfamily C member 1 ISO RGD PMID:19889962 RGD:7247600 NCBI chr23:38,350,066...38,416,086
Ensembl chr23:38,350,278...38,414,464
JBrowse link
G TRPC6 transient receptor potential cation channel subfamily C member 6 ISO RGD PMID:19889962 RGD:7247600 NCBI chr 5:29,897,378...30,007,885
Ensembl chr 5:29,897,210...30,007,723
JBrowse link
G UBQLN1 ubiquilin 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:75,767,345...75,812,278
Ensembl chr 1:75,767,188...75,838,051
JBrowse link
G UCN2 urocortin 2 ISO RGD PMID:14519439 RGD:2306174 NCBI chr20:40,551,060...40,552,920 JBrowse link
G UCN3 urocortin 3 ISO RGD PMID:14519439 RGD:2306174 NCBI chr 2:30,541,316...30,547,839
Ensembl chr 2:30,541,779...30,542,282
JBrowse link
G VASN vasorin IEA Ensembl GO_REF:0000107 NCBI chr 6:37,014,704...37,025,734
Ensembl chr 6:37,015,333...37,017,351
JBrowse link
G VEGFA vascular endothelial growth factor A ISS UniProtKB GO_REF:0000024 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965
JBrowse link
G VLDLR very low density lipoprotein receptor ISO RGD PMID:19233325 RGD:2324641 NCBI chr 1:91,242,010...91,277,030
Ensembl chr 1:91,241,509...91,272,495
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:42,663,287...42,668,665
Ensembl chr 8:42,664,223...42,668,514
JBrowse link
cellular response to oxygen-glucose deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIFM1 apoptosis inducing factor mitochondria associated 1 ISO RGD PMID:14526224 RGD:10047409 NCBI chr  X:101,275,027...101,307,551
Ensembl chr  X:101,275,017...101,307,367
JBrowse link
G AQP3 aquaporin 3 ISO (MGI:MGI:5551666|PMID:24462679) MGI PMID:24462679 MGI:MGI:5551666 NCBI chr11:50,517,509...50,524,565 JBrowse link
G ATF4 activating transcription factor 4 ISO RGD PMID:20444431 RGD:13464322 NCBI chr10:25,528,880...25,531,018
Ensembl chr10:25,528,874...25,530,993
JBrowse link
G CACNB3 calcium voltage-gated channel auxiliary subunit beta 3 ISO RGD PMID:23421680 RGD:13514095 NCBI chr27:5,705,587...5,714,620
Ensembl chr27:5,706,064...5,717,647
JBrowse link
G CBL Cbl proto-oncogene ISO RGD PMID:24229686 RGD:11038824 NCBI chr 5:14,600,409...14,676,974
Ensembl chr 5:14,607,013...14,676,956
JBrowse link
G DNM1L dynamin 1 like ISO RGD PMID:23658809 RGD:12738215 NCBI chr27:16,161,855...16,211,983
Ensembl chr27:16,163,357...16,211,957
JBrowse link
G IREB2 iron responsive element binding protein 2 ISO RGD PMID:16135072 RGD:12904046 NCBI chr13:38,398,445...38,441,128
Ensembl chr13:38,400,591...38,441,015
JBrowse link
G MFN1 mitofusin 1 ISO RGD PMID:23658809 RGD:12738215 NCBI chr34:12,785,799...12,816,881
Ensembl chr34:12,785,856...12,815,994
JBrowse link
G MFN2 mitofusin 2 ISO RGD PMID:23658809 RGD:12738215 NCBI chr 2:84,284,719...84,310,715
Ensembl chr 2:84,284,719...84,308,225
JBrowse link
G MIR874 microRNA mir-874 ISO (MGI:MGI:5551666|PMID:24462679) MGI PMID:24462679 MGI:MGI:5551666 NCBI chr11:25,355,355...25,355,432
Ensembl chr11:25,355,354...25,355,437
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase ISO RGD PMID:28528966 RGD:13781879 NCBI chr18:14,110,045...14,211,268
Ensembl chr18:13,993,022...14,208,657
JBrowse link
G PPP1R15A protein phosphatase 1 regulatory subunit 15A ISO RGD PMID:21525936 RGD:10054236 NCBI chr 1:107,486,399...107,490,151
Ensembl chr 1:107,486,438...107,489,222
JBrowse link
G TSC1 TSC complex subunit 1 ISO PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chr 9:51,409,307...51,459,546
Ensembl chr 9:51,425,937...51,454,677
JBrowse link
hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYBB cytochrome b-245 beta chain ISO RGD PMID:21302291 RGD:11040609 NCBI chr  X:32,533,365...32,568,149
Ensembl chr  X:32,533,320...32,568,217
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha IEA Ensembl GO_REF:0000107 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692
JBrowse link
G PDK1 pyruvate dehydrogenase kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr36:16,918,329...16,944,532
Ensembl chr36:16,918,058...16,944,620
JBrowse link
G PDK3 pyruvate dehydrogenase kinase 3 IEA Ensembl GO_REF:0000107 NCBI chr  X:19,994,383...20,058,979
Ensembl chr  X:19,994,393...20,058,485
JBrowse link
intrinsic apoptotic signaling pathway in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BNIP3 BCL2 interacting protein 3 IEA Ensembl GO_REF:0000107 NCBI chr28:40,037,681...40,050,499
Ensembl chr28:40,038,643...40,049,797
JBrowse link
G TP53 tumor protein p53 IEA Ensembl GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109
JBrowse link
negative regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD34 CD34 molecule ISS
IEA
UniProtKB
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 7:6,734,363...6,747,991
Ensembl chr 7:6,734,363...6,748,581
JBrowse link
G DDAH1 dimethylarginine dimethylaminohydrolase 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:62,548,852...62,683,687
Ensembl chr 6:62,549,152...62,683,729
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:18539296 RGD:9590185 NCBI chr  X:55,821,227...55,857,597
Ensembl chr  X:55,821,234...55,855,502
JBrowse link
negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENO1 enolase 1 ISO (PMID:15459207) CAFA PMID:15459207 NCBI chr 5:62,300,805...62,314,508
Ensembl chr 5:62,300,808...62,304,093
JBrowse link
G HYOU1 hypoxia up-regulated 1 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 5:14,795,750...14,808,203
Ensembl chr 5:14,795,750...14,807,262
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chr30:30,683,192...30,760,479
Ensembl chr30:30,683,107...30,760,479
JBrowse link
G PINK1 PTEN induced kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:78,276,091...78,293,761
Ensembl chr 2:78,277,077...78,294,123
JBrowse link
G TMBIM6 transmembrane BAX inhibitor motif containing 6 IEA Ensembl GO_REF:0000107 NCBI chr27:4,921,606...4,944,830
Ensembl chr27:4,921,606...4,944,783
JBrowse link
negative regulation of hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMMD1 copper metabolism domain containing 1 ISO (MGI:MGI:3713589|PMID:17371845) MGI PMID:17371845 MGI:MGI:3713589 NCBI chr10:61,886,281...62,059,610
Ensembl chr10:61,886,281...62,059,591
JBrowse link
G VHL von Hippel-Lindau tumor suppressor ISO (MGI:MGI:5618205|PMID:25186293) MGI PMID:25186293 MGI:MGI:5618205 NCBI chr20:8,206,616...8,211,347
Ensembl chr20:8,206,616...8,211,323
JBrowse link
negative regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 ISO (PMID:22735262) BHF-UCL PMID:22735262 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995
JBrowse link
G HIF1AN hypoxia inducible factor 1 subunit alpha inhibitor IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr28:13,253,646...13,277,997
Ensembl chr28:13,258,765...13,267,608
JBrowse link
G SIRT2 sirtuin 2 IEA Ensembl GO_REF:0000107 NCBI chr 1:114,224,922...114,235,041
Ensembl chr 1:114,224,900...114,234,583
JBrowse link
G VHL von Hippel-Lindau tumor suppressor ISO (PMID:11641274) UniProtKB PMID:11641274 NCBI chr20:8,206,616...8,211,347
Ensembl chr20:8,206,616...8,211,323
JBrowse link
positive regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KCNK2 potassium two pore domain channel subfamily K member 2 ISO RGD PMID:24705172 RGD:9831164 NCBI chr 7:12,893,654...13,092,319
Ensembl chr 7:12,894,149...13,090,110
JBrowse link
positive regulation of hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RWDD3 RWD domain containing 3 IEA InterPro
Ensembl
GO_REF:0000002, GO_REF:0000107 NCBI chr 6:54,082,061...54,094,218
Ensembl chr 6:54,079,751...54,086,489
JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLK3 polo like kinase 3 IEA Ensembl GO_REF:0000107 NCBI chr15:15,519,042...15,523,960
Ensembl chr15:15,519,026...15,524,230
JBrowse link
G SIRT2 sirtuin 2 IEA Ensembl GO_REF:0000107 NCBI chr 1:114,224,922...114,235,041
Ensembl chr 1:114,224,900...114,234,583
JBrowse link
positive regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HIF1A hypoxia inducible factor 1 subunit alpha IEA Ensembl GO_REF:0000107 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692
JBrowse link
G NFE2L2 nuclear factor, erythroid 2 like 2 IEA Ensembl GO_REF:0000107 NCBI chr36:20,989,205...21,087,044
Ensembl chr36:20,989,360...21,012,524
JBrowse link
G NOTCH1 notch receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277
JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region IEA Ensembl GO_REF:0000107 NCBI chr 3:84,060,417...84,286,008
Ensembl chr 3:84,064,440...84,286,360
JBrowse link
G TP53 tumor protein p53 IEA Ensembl GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109
JBrowse link
G VEGFA vascular endothelial growth factor A ISO (PMID:19652095) BHF-UCL PMID:19652095 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965
JBrowse link
regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AJUBA ajuba LIM protein ISO (PMID:22286099) UniProtKB PMID:22286099 NCBI chr 8:3,272,408...3,302,179
Ensembl chr 8:3,272,405...3,301,708
JBrowse link
G CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:581,276...585,367
Ensembl chr 6:581,280...585,301
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO RGD PMID:18054269 RGD:9068899 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 ISO (MGI:MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:MGI:6271078 NCBI chr17:7,931,786...8,012,484
Ensembl chr17:7,934,739...8,178,707
JBrowse link
G USP19 ubiquitin specific peptidase 19 IEA Ensembl GO_REF:0000107 NCBI chr20:40,062,802...40,074,221
Ensembl chr20:40,064,599...40,074,082
JBrowse link
regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BACH1 BTB domain and CNC homolog 1 IEA Ensembl GO_REF:0000107 NCBI chr31:24,269,310...24,310,369
Ensembl chr31:24,269,280...24,381,454
JBrowse link
G EGR1 early growth response 1 IEA Ensembl GO_REF:0000107 NCBI chr11:26,046,195...26,049,806
Ensembl chr11:26,046,228...26,048,575
JBrowse link
G STOX1 storkhead box 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:20,013,893...20,065,480
Ensembl chr 4:20,014,007...20,060,394
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16162
    response to stimulus 8537
      response to abiotic stimulus 1472
        response to oxygen levels 518
          response to decreased oxygen levels 451
            cellular response to decreased oxygen levels 201
              cellular response to anoxia 3
              cellular response to hypoxia + 174
              cellular response to oxygen-glucose deprivation 13
              positive regulation of SREBP signaling pathway in response to decreased oxygen levels 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.