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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to decreased oxygen levels
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Accession:GO:0036294 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting a decline in the level of oxygen.
Comment:This term should be used when a decrease in oxygen levels is not considered a stress response. For a hypoxic stress response, consider instead 'cellular response to hypoxia ; GO:0071456'.
Synonyms:exact_synonym: cellular response to lowered oxygen levels


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cellular response to decreased oxygen levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 thymoma viral proto-oncogene 1 IDA (MGI:MGI:5584033|PMID:24875179) MGI PMID:24875179 MGI:MGI:5584033 NCBI chr12:112,653,821...112,674,884
Ensembl chr12:112,653,821...112,674,884
JBrowse link
G Cpeb4 cytoplasmic polyadenylation element binding protein 4 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr11:31,870,104...31,935,635
Ensembl chr11:31,872,211...31,935,634
JBrowse link
G Mir106a microRNA 106a IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr  X:52,742,503...52,742,567
Ensembl chr  X:52,742,503...52,742,567
JBrowse link
G Mir142 microRNA 142 IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr11:87,756,864...87,756,927
Ensembl chr11:87,756,864...87,756,927
JBrowse link
G Mir146 microRNA 146 IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr11:43,374,397...43,374,461
Ensembl chr11:43,374,397...43,374,461
JBrowse link
G Mir150 microRNA 150 IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr 7:45,121,757...45,121,821
Ensembl chr 7:45,121,757...45,121,821
JBrowse link
G Mir15b microRNA 15b IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr 3:69,009,772...69,009,835
Ensembl chr 3:69,009,772...69,009,835
JBrowse link
G Mir17 microRNA 17 IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr14:115,043,671...115,043,754
Ensembl chr14:115,043,671...115,043,754
JBrowse link
G Mir199a-1 microRNA 199a-1 IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr 9:21,496,495...21,496,564
Ensembl chr 9:21,496,495...21,496,564
JBrowse link
G Mir199a-2 microRNA 199a-2 IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr 1:162,217,814...162,217,923
Ensembl chr 1:162,217,814...162,217,923
JBrowse link
G Mir199b microRNA 199b IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr 2:32,318,460...32,318,569
Ensembl chr 2:32,318,460...32,318,569
JBrowse link
G Mir204 microRNA 204 IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr19:22,750,605...22,750,672
Ensembl chr19:22,750,605...22,750,672
JBrowse link
G Mir207 microRNA 207 IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr 4:40,722,917...40,722,995
Ensembl chr 4:40,722,917...40,722,995
JBrowse link
G Mir20b microRNA 20b IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr  X:52,742,113...52,742,192
Ensembl chr  X:52,742,113...52,742,192
JBrowse link
G Mir21a microRNA 21a IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr11:86,584,067...86,584,158
Ensembl chr11:86,584,067...86,584,158
JBrowse link
G Mir221 microRNA 221 IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr  X:19,146,294...19,146,388
Ensembl chr  X:19,146,294...19,146,388
JBrowse link
G Mir222 microRNA 222 IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr  X:19,146,893...19,146,971
Ensembl chr  X:19,146,893...19,146,971
JBrowse link
G Mir223 microRNA 223 IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr  X:96,242,817...96,242,926
Ensembl chr  X:96,242,817...96,242,926
JBrowse link
G Mir31 microRNA 31 IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr 4:88,910,557...88,910,662
Ensembl chr 4:88,910,557...88,910,662
JBrowse link
G Mir327 microRNA 327 IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr14:44,947,443...44,947,511
Ensembl chr14:44,947,443...44,947,511
JBrowse link
G Mir379 microRNA 379 IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr12:109,709,060...109,709,125
Ensembl chr12:109,709,060...109,709,125
JBrowse link
G Mir491 microRNA 491 IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr 4:88,122,040...88,122,125
Ensembl chr 4:88,122,040...88,122,125
JBrowse link
G Mir499 microRNA 499 IEP (MGI:MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:MGI:5693365 NCBI chr 2:155,622,880...155,622,958
Ensembl chr 2:155,622,880...155,622,958
JBrowse link
G Pick1 protein interacting with C kinase 1 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr15:79,229,140...79,249,466
Ensembl chr15:79,229,173...79,249,484
JBrowse link
G Pten phosphatase and tensin homolog IDA (MGI:MGI:5584033|PMID:24875179) MGI PMID:24875179 MGI:MGI:5584033 NCBI chr19:32,757,577...32,826,160
Ensembl chr19:32,757,497...32,826,160
JBrowse link
cellular response to anoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carlr cardiac and apoptosis-related long non-coding RNA IMP (MGI:MGI:5559032|PMID:24710105) MGI PMID:24710105 MGI:MGI:5559032 NCBI chr 2:18,799,245...18,801,818
Ensembl chr 2:18,799,245...18,801,818
JBrowse link
G Cftr cystic fibrosis transmembrane conductance regulator ISO RGD PMID:14975182 RGD:1599599 NCBI chr 6:18,170,687...18,322,770
Ensembl chr 6:18,170,687...18,322,768
JBrowse link
G Daxx Fas death domain-associated protein ISO RGD PMID:17289031 RGD:9587773 NCBI chr17:33,909,404...33,915,590
Ensembl chr17:33,909,414...33,915,590
JBrowse link
G Eef2k eukaryotic elongation factor-2 kinase ISO RGD PMID:12194824 RGD:8553742 NCBI chr 7:120,842,642...120,907,219
Ensembl chr 7:120,842,831...120,907,450
JBrowse link
cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaa2 acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase) ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr18:74,779,212...74,806,207
Ensembl chr18:74,779,197...74,806,208
JBrowse link
G Adam8 a disintegrin and metallopeptidase domain 8 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:139,978,932...139,995,207
Ensembl chr 7:139,978,932...139,992,562
JBrowse link
G Adrb2 adrenergic receptor, beta 2 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr18:62,177,713...62,179,981
Ensembl chr18:62,177,816...62,179,959
JBrowse link
G Ak4 adenylate kinase 4 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:101,416,478...101,467,771
Ensembl chr 4:101,419,277...101,466,995
JBrowse link
G Akt1 thymoma viral proto-oncogene 1 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr12:112,653,821...112,674,884
Ensembl chr12:112,653,821...112,674,884
JBrowse link
G Angpt4 angiopoietin 4 ISO (PMID:12958144) UniProtKB PMID:12958144 NCBI chr 2:151,911,207...151,945,337
Ensembl chr 2:151,911,210...151,945,337
JBrowse link
G Ankrd1 ankyrin repeat domain 1 (cardiac muscle) ISO RGD PMID:19299913 RGD:5133278 NCBI chr19:36,111,965...36,119,844
Ensembl chr19:36,111,961...36,120,099
JBrowse link
G Aqp1 aquaporin 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 6:55,336,299...55,348,555
Ensembl chr 6:55,336,432...55,348,555
JBrowse link
G Aqp3 aquaporin 3 ISO (MGI:MGI:5551666|PMID:24462679) MGI PMID:24462679 MGI:MGI:5551666 NCBI chr 4:41,092,724...41,098,183
Ensembl chr 4:41,092,722...41,098,183
JBrowse link
G Asl argininosuccinate lyase ISO RGD PMID:11097477 RGD:1599264 NCBI chr 5:130,011,258...130,024,381
Ensembl chr 5:130,011,258...130,029,247
JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b ISO RGD PMID:29300489 RGD:13792656 NCBI chr 3:105,942,698...105,959,263
Ensembl chr 3:105,942,698...105,960,099
JBrowse link
G Atp7a ATPase, Cu++ transporting, alpha polypeptide ISO RGD PMID:21346155 RGD:11341705 NCBI chr  X:106,027,224...106,128,161
Ensembl chr  X:106,027,276...106,124,926
JBrowse link
G B3gat1 beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) ISO RGD PMID:21400481 RGD:14390075 NCBI chr 9:26,733,723...26,761,350
Ensembl chr 9:26,733,728...26,763,101
JBrowse link
G Bad BCL2-associated agonist of cell death IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr19:6,941,861...6,951,905
Ensembl chr19:6,941,861...6,951,899
JBrowse link
G Bbc3 BCL2 binding component 3 ISO (PMID:20810912) UniProtKB PMID:20810912 NCBI chr 7:16,308,398...16,318,334
Ensembl chr 7:16,308,393...16,318,205
JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 IDA (MGI:MGI:77298|PMID:7595537) MGI PMID:7595537 MGI:MGI:77298 NCBI chr 1:106,538,176...106,714,290
Ensembl chr 1:106,538,178...106,714,274
JBrowse link
G Bcl2l1 BCL2-like 1 ISO with serum deprivation RGD PMID:20669351 RGD:11353793 NCBI chr 2:152,758,732...152,833,803
Ensembl chr 2:152,780,668...152,831,728
JBrowse link
G Bdkrb2 bradykinin receptor, beta 2 ISO RGD PMID:19565561 RGD:4891057 NCBI chr12:105,563,172...105,595,244
Ensembl chr12:105,563,226...105,595,237
JBrowse link
G Bnip3 BCL2/adenovirus E1B interacting protein 3 ISO MGI GO_REF:0000008, MGI:MGI:2154458 NCBI chr 7:138,890,836...138,909,506
Ensembl chr 7:138,890,836...138,909,519
JBrowse link
G Bnip3l BCL2/adenovirus E1B interacting protein 3-like ISO MGI GO_REF:0000008, MGI:MGI:2154458 NCBI chr14:66,985,238...67,008,877
Ensembl chr14:66,985,239...67,008,877
JBrowse link
G Brip1 BRCA1 interacting protein C-terminal helicase 1 ISO RGD PMID:12511571 RGD:11251702 NCBI chr11:86,058,136...86,201,215
Ensembl chr11:86,058,138...86,201,193
JBrowse link
G Casr calcium-sensing receptor ISO RGD PMID:21073657 RGD:7206834 NCBI chr16:36,490,585...36,562,141
Ensembl chr16:36,493,696...36,562,141
JBrowse link
G Cbs cystathionine beta-synthase ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr17:31,612,623...31,637,233
Ensembl chr17:31,608,894...31,637,238
JBrowse link
G Ccna2 cyclin A2 ISO RGD PMID:25289051 RGD:10054493 NCBI chr 3:36,564,865...36,573,038
Ensembl chr 3:36,564,865...36,572,150
JBrowse link
G Ccnb1 cyclin B1 ISO RGD PMID:12374461 RGD:2316579 NCBI chr13:100,778,739...100,786,486
Ensembl chr13:100,778,650...100,786,570
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator ISO RGD PMID:12031707 RGD:8663470 NCBI chr 1:58,711,311...58,758,884
Ensembl chr 1:58,711,508...58,758,884
JBrowse link
G Clca1 chloride channel accessory 1 ISO RGD PMID:18616988 RGD:4188872 NCBI chr 3:145,004,537...145,032,776
Ensembl chr 3:145,003,817...145,032,776
JBrowse link
G Cox4i2 cytochrome c oxidase subunit 4I2 ISO RGD PMID:23303788 RGD:11344908 NCBI chr 2:152,753,916...152,765,039
Ensembl chr 2:152,754,173...152,765,037
JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 IDA
ISO
(MGI:MGI:5543770|PMID:18752464) UniProtKB
MGI
PMID:18752464 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5543770 NCBI chr 7:81,347,026...81,458,001
Ensembl chr 7:81,347,026...81,455,465
JBrowse link
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 IDA
ISO
(MGI:MGI:5543770|PMID:18752464) UniProtKB
MGI
PMID:18752464 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5543770 NCBI chr 5:43,225,349...43,289,724
Ensembl chr 5:43,233,170...43,289,724
JBrowse link
G Cr1l complement component (3b/4b) receptor 1-like IDA (MGI:MGI:4821502|PMID:20675597) MGI PMID:20675597 MGI:MGI:4821502 NCBI chr 1:195,098,711...195,131,570
Ensembl chr 1:195,097,382...195,131,586
JBrowse link
G Cybb cytochrome b-245, beta polypeptide ISO RGD PMID:21302291 RGD:11040609 NCBI chr  X:9,435,252...9,487,766
Ensembl chr  X:9,435,252...9,487,771
JBrowse link
G Dnmt3a DNA methyltransferase 3A ISO RGD PMID:24282625 RGD:9589039 NCBI chr12:3,801,559...3,914,443
Ensembl chr12:3,806,007...3,914,443
JBrowse link
G Drd1 dopamine receptor D1 ISO RGD PMID:20969567 RGD:7248614 NCBI chr13:54,051,183...54,055,658
Ensembl chr13:54,051,183...54,055,705
JBrowse link
G E2f1 E2F transcription factor 1 ISO RGD PMID:19088195 RGD:2316261 NCBI chr 2:154,559,400...154,569,892
Ensembl chr 2:154,559,407...154,569,892
JBrowse link
G Edn1 endothelin 1 ISO RGD PMID:9551744 RGD:8662285 NCBI chr13:42,301,476...42,307,990
Ensembl chr13:42,301,476...42,307,990
JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 8:124,908,587...124,949,254
Ensembl chr 8:124,908,587...124,949,324
JBrowse link
G Egln2 egl-9 family hypoxia-inducible factor 2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 7:27,158,658...27,166,802
Ensembl chr 7:27,158,658...27,166,802
JBrowse link
G Egln3 egl-9 family hypoxia-inducible factor 3 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr12:54,178,981...54,203,874
Ensembl chr12:54,178,981...54,203,860
JBrowse link
G Egr1 early growth response 1 ISO RGD PMID:21220915 RGD:5131857 NCBI chr18:34,861,207...34,864,956
Ensembl chr18:34,859,823...34,864,984
JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 8:27,260,327...27,275,656
Ensembl chr 8:27,260,329...27,276,674
JBrowse link
G Eln elastin ISO RGD PMID:16055482 RGD:9585727 NCBI chr 5:134,702,595...134,747,368
Ensembl chr 5:134,702,593...134,747,323
JBrowse link
G Endog endonuclease G ISO RGD PMID:17379825 RGD:9685412 NCBI chr 2:30,171,408...30,174,069
Ensembl chr 2:30,171,493...30,174,069
JBrowse link
G Eno1 enolase 1, alpha non-neuron ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chr 4:150,236,708...150,248,879
Ensembl chr 4:150,236,721...150,248,879
JBrowse link
G Epas1 endothelial PAS domain protein 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr17:86,753,864...86,833,410
Ensembl chr17:86,753,700...86,833,410
JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha ISO RGD PMID:12752442 RGD:10401130 NCBI chr14:45,283,087...45,318,572
Ensembl chr14:45,283,087...45,318,771
JBrowse link
G Fabp1 fatty acid binding protein 1, liver ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 6:71,199,879...71,205,034
Ensembl chr 6:71,199,827...71,205,023
JBrowse link
G Fam162a family with sequence similarity 162, member A IDA
IBA
ISO
(MGI:MGI:5319611|PMID:17316997)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
GO_Central
MGI
RGD
PMID:17316997, PMID:21873635 GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:4834177, MGI:MGI:5319611, MGI:MGI:6201960 NCBI chr16:36,043,844...36,071,561
Ensembl chr16:36,043,761...36,071,594
JBrowse link
G Fas Fas (TNF receptor superfamily member 6) ISO RGD PMID:12031707 RGD:8663470 NCBI chr19:34,290,647...34,327,775
Ensembl chr19:34,290,666...34,327,772
JBrowse link
G Flt1 FMS-like tyrosine kinase 1 ISO RGD PMID:11981751 RGD:634296 NCBI chr 5:147,561,604...147,726,438
Ensembl chr 5:147,561,604...147,726,011
JBrowse link
G Fmn2 formin 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 1:174,501,752...174,822,729
Ensembl chr 1:174,501,825...174,822,729
JBrowse link
G Fndc1 fibronectin type III domain containing 1 ISO (MGI:MGI:4420359|PMID:19723622) MGI PMID:19723622 MGI:MGI:4420359 NCBI chr17:7,738,569...7,827,340
Ensembl chr17:7,738,569...7,827,302
JBrowse link
G Foxo3 forkhead box O3 ISO RGD PMID:24278276 RGD:10402204 NCBI chr10:42,181,845...42,276,695
Ensembl chr10:42,181,841...42,276,755
JBrowse link
G Gata6 GATA binding protein 6 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr18:11,052,510...11,085,636
Ensembl chr18:11,052,064...11,085,635
JBrowse link
G Gnb1 guanine nucleotide binding protein (G protein), beta 1 ISO (MGI:MGI:4420359|PMID:19723622) MGI PMID:19723622 MGI:MGI:4420359 NCBI chr 4:155,491,300...155,559,269
Ensembl chr 4:155,491,361...155,559,269
JBrowse link
G Gngt1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 ISO (MGI:MGI:4420359|PMID:19723622) MGI PMID:19723622 MGI:MGI:4420359 NCBI chr 6:3,989,082...3,997,436
Ensembl chr 6:3,993,792...3,997,436
JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit ISO
IBA
IGI
(MGI:MGI:6201960|PMID:21873635)
(MGI:MGI:5528778|PMID:24011070)
RGD
GO_Central
MGI
PMID:21873635, PMID:24011070 GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:4834177, MGI:MGI:5528778, MGI:MGI:6201960 NCBI chr12:73,901,324...73,947,554
Ensembl chr12:73,901,375...73,947,530
JBrowse link
G Hif3a hypoxia inducible factor 3, alpha subunit NOT ISO
IBA
(PMID:11573933)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
GO_Central
PMID:11573933, PMID:21873635 MGI:MGI:6201960 NCBI chr 7:17,030,993...17,062,427
Ensembl chr 7:17,031,507...17,062,427
JBrowse link
G Higd1a HIG1 domain family, member 1A IMP
IDA
(MGI:MGI:5643884|PMID:25683712)
(MGI:MGI:3654896|PMID:16815968), (MGI:MGI:5306879|PMID:21856340)
MGI PMID:16815968, PMID:21856340, PMID:25683712 MGI:MGI:3654896, MGI:MGI:5306879, MGI:MGI:5643884 NCBI chr 9:121,848,557...121,857,796
Ensembl chr 9:121,848,563...121,858,362
JBrowse link
G Hilpda hypoxia inducible lipid droplet associated ISO (PMID:10690527) UniProtKB PMID:10690527 NCBI chr 6:29,272,488...29,275,449
Ensembl chr 6:29,272,488...29,275,446
JBrowse link
G Hmox1 heme oxygenase 1 ISO (PMID:12511571) UniProtKB PMID:12511571 NCBI chr 8:75,093,618...75,100,593
Ensembl chr 8:75,093,621...75,100,589
JBrowse link
G Hnf4a hepatic nuclear factor 4, alpha ISO RGD PMID:24177414 RGD:10445837 NCBI chr 2:163,506,811...163,572,907
Ensembl chr 2:163,506,808...163,572,910
JBrowse link
G Hp1bp3 heterochromatin protein 1, binding protein 3 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:138,216,470...138,244,683
Ensembl chr 4:138,216,296...138,244,683
JBrowse link
G Hyou1 hypoxia up-regulated 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 9:44,379,490...44,392,369
Ensembl chr 9:44,379,490...44,392,369
JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:20631551 RGD:8662392 NCBI chr 9:21,015,940...21,028,814
Ensembl chr 9:21,015,985...21,028,817
JBrowse link
G Il7 interleukin 7 ISO RGD PMID:19055876 RGD:10402937 NCBI chr 3:7,572,028...7,613,760
Ensembl chr 3:7,569,994...7,613,760
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 ISO RGD PMID:15793310 RGD:1579809 NCBI chr  X:74,013,914...74,023,921
Ensembl chr  X:74,013,914...74,023,918
JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO RGD PMID:22159112 RGD:6893269 NCBI chr 9:54,862,658...54,912,534
Ensembl chr 9:54,863,789...54,912,530
JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor 1 ISO RGD PMID:17285299 RGD:6482794 NCBI chr 6:108,213,083...108,551,116
Ensembl chr 6:108,213,096...108,551,109
JBrowse link
G Itpr2 inositol 1,4,5-triphosphate receptor 2 ISO RGD PMID:17285299 RGD:6482794 NCBI chr 6:146,108,299...146,502,258
Ensembl chr 6:146,108,299...146,502,223
JBrowse link
G Kcnd2 potassium voltage-gated channel, Shal-related family, member 2 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 6:21,215,346...21,729,805
Ensembl chr 6:21,215,503...21,729,805
JBrowse link
G Kcnk2 potassium channel, subfamily K, member 2 ISO RGD PMID:24705172 RGD:9831164 NCBI chr 1:189,207,930...189,402,782
Ensembl chr 1:189,207,930...189,402,273
JBrowse link
G Kcnk3 potassium channel, subfamily K, member 3 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 5:30,588,170...30,625,270
Ensembl chr 5:30,588,170...30,625,271
JBrowse link
G Kcnmb1 potassium large conductance calcium-activated channel, subfamily M, beta member 1 ISO RGD PMID:19461047 RGD:10412041 NCBI chr11:33,962,955...33,973,641
Ensembl chr11:33,963,013...33,973,641
JBrowse link
G Lmna lamin A ISO (PMID:20810912) UniProtKB PMID:20810912 NCBI chr 3:88,481,148...88,509,932
Ensembl chr 3:88,480,147...88,509,956
JBrowse link
G Mdm2 transformed mouse 3T3 cell double minute 2 ISO (PMID:20810912) UniProtKB PMID:20810912 NCBI chr10:117,688,875...117,710,758
Ensembl chr10:117,688,875...117,710,758
JBrowse link
G Mdm4 transformed mouse 3T3 cell double minute 4 ISO (PMID:20810912) UniProtKB PMID:20810912 NCBI chr 1:132,986,105...133,030,587
Ensembl chr 1:132,959,484...133,030,561
JBrowse link
G Mfn1 mitofusin 1 ISO RGD PMID:27833818 RGD:12910766 NCBI chr 3:32,529,443...32,579,225
Ensembl chr 3:32,529,465...32,579,239
JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:28478070 RGD:12910733 NCBI chr 4:147,873,586...147,904,909
Ensembl chr 4:147,873,599...147,904,704
JBrowse link
G Mgarp mitochondria localized glutamic acid rich protein IDA (MGI:MGI:3850758|PMID:19528298) UniProtKB PMID:19528298 MGI:MGI:3850758 NCBI chr 3:51,388,412...51,396,547
Ensembl chr 3:51,388,412...51,396,738
JBrowse link
G Mief1 mitochondrial elongation factor 1 ISO RGD PMID:25911325 RGD:12880381 NCBI chr15:80,233,964...80,253,372
Ensembl chr15:80,234,018...80,253,371
JBrowse link
G Mif macrophage migration inhibitory factor (glycosylation-inhibiting factor) ISO RGD PMID:19462902 RGD:4890975 NCBI chr10:75,859,353...75,860,277
Ensembl chr10:75,859,353...75,860,240
JBrowse link
G Mir199a-2 microRNA 199a-2 IGI (MGI:MGI:5528778|PMID:24011070) MGI PMID:24011070 MGI:MGI:5528778 NCBI chr 1:162,217,814...162,217,923
Ensembl chr 1:162,217,814...162,217,923
JBrowse link
G Mir214 microRNA 214 IGI (MGI:MGI:5528778|PMID:24011070) MGI PMID:24011070 MGI:MGI:5528778 NCBI chr 1:162,223,368...162,223,477
Ensembl chr 1:162,223,368...162,223,477
JBrowse link
G Mir223 microRNA 223 ISO RGD PMID:29608885 RGD:21408565 NCBI chr  X:96,242,817...96,242,926
Ensembl chr  X:96,242,817...96,242,926
JBrowse link
G Mir668 microRNA 668 IDA (MGI:MGI:6276530|PMID:30325740) MGI PMID:30325740 MGI:MGI:6276530 NCBI chr12:109,734,732...109,734,797
Ensembl chr12:109,734,732...109,734,797
JBrowse link
G Mir874 microRNA 874 ISO (MGI:MGI:5551666|PMID:24462679) MGI PMID:24462679 MGI:MGI:5551666 NCBI chr13:58,023,125...58,023,200
Ensembl chr13:58,023,125...58,023,200
JBrowse link
G Mpl myeloproliferative leukemia virus oncogene ISO RGD PMID:15642952 RGD:10449018 NCBI chr 4:118,442,412...118,457,688
Ensembl chr 4:118,442,415...118,457,513
JBrowse link
G Mst1 macrophage stimulating 1 (hepatocyte growth factor-like) ISO RGD PMID:23647599 RGD:10448278 NCBI chr 9:108,080,409...108,085,027
Ensembl chr 9:108,080,436...108,085,003
JBrowse link
G Mt3 metallothionein 3 ISO (PMID:18206644) UniProtKB PMID:18206644 NCBI chr 8:94,152,607...94,154,148
Ensembl chr 8:94,152,607...94,154,146
JBrowse link
G Mtor mechanistic target of rapamycin kinase IDA (MGI:MGI:3654795|PMID:16915281) UniProtKB PMID:16915281 MGI:MGI:3654795 NCBI chr 4:148,448,582...148,557,685
Ensembl chr 4:148,448,611...148,557,683
JBrowse link
G Myc myelocytomatosis oncogene ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr15:61,985,341...61,990,361
Ensembl chr15:61,985,391...61,990,374
JBrowse link
G Myocd myocardin ISO RGD PMID:20621093 RGD:5132874 NCBI chr11:65,173,608...65,269,989
Ensembl chr11:65,176,561...65,269,989
JBrowse link
G Ndnf neuron-derived neurotrophic factor ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 6:65,671,611...65,712,323
Ensembl chr 6:65,671,590...65,712,326
JBrowse link
G Ndrg1 N-myc downstream regulated gene 1 ISO (PMID:20810912) UniProtKB PMID:20810912 NCBI chr15:66,929,318...66,969,641
Ensembl chr15:66,929,318...66,969,640
JBrowse link
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 ISO RGD PMID:23904790 RGD:10412703 NCBI chr 2:75,675,513...75,704,663
Ensembl chr 2:75,675,513...75,704,641
JBrowse link
G Nkx3-1 NK3 homeobox 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:69,190,692...69,194,658
Ensembl chr14:69,190,638...69,194,662
JBrowse link
G Nog noggin ISO RGD PMID:25740156 RGD:12801489 NCBI chr11:89,300,638...89,302,559
Ensembl chr11:89,300,638...89,302,332
JBrowse link
G Nol3 nucleolar protein 3 (apoptosis repressor with CARD domain) ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 8:105,276,145...105,281,939
Ensembl chr 8:105,276,140...105,281,939
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:15,937,835...15,946,108
Ensembl chr 7:15,936,183...15,946,074
JBrowse link
G Npepps aminopeptidase puromycin sensitive ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:97,205,842...97,280,660
Ensembl chr11:97,205,842...97,280,638
JBrowse link
G Npm1 nucleophosmin 1 ISO RGD PMID:21444791 RGD:11535018 NCBI chr11:33,152,498...33,164,142
Ensembl chr11:33,152,287...33,163,206
JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase ISO RGD PMID:27833818 RGD:12910766 NCBI chr16:29,579,281...29,663,127
Ensembl chr16:29,579,334...29,654,884
JBrowse link
G Oprd1 opioid receptor, delta 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:132,110,188...132,144,486
Ensembl chr 4:132,110,726...132,144,486
JBrowse link
G P4hb prolyl 4-hydroxylase, beta polypeptide ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:120,560,298...120,573,253
Ensembl chr11:120,560,298...120,573,253
JBrowse link
G Palld palladin, cytoskeletal associated protein ISO RGD PMID:16481593 RGD:2325785 NCBI chr 8:61,511,431...61,902,707
Ensembl chr 8:61,511,433...61,902,690
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1, cytosolic ISO RGD PMID:24177414 RGD:10445837 NCBI chr 2:173,153,073...173,159,274
Ensembl chr 2:173,153,048...173,159,273
JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 ISO RGD PMID:23647599 RGD:10448278 NCBI chr10:7,627,845...7,681,337
Ensembl chr10:7,629,373...7,681,136
JBrowse link
G Pgk1 phosphoglycerate kinase 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:106,187,100...106,203,699
Ensembl chr  X:106,187,100...106,203,699
JBrowse link
G Phb2 prohibitin 2 ISO RGD PMID:25031298 RGD:12903263 NCBI chr 6:124,712,289...124,716,945
Ensembl chr 6:124,712,336...124,716,950
JBrowse link
G Pink1 PTEN induced putative kinase 1 IMP
ISO
(MGI:MGI:5558956|PMID:24553947) ParkinsonsUK-UCL
MGI
PMID:24553947 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5558956 NCBI chr 4:138,313,409...138,326,296
Ensembl chr 4:138,313,409...138,326,307
JBrowse link
G Plau plasminogen activator, urokinase ISO RGD PMID:19490965 RGD:7241802 NCBI chr14:20,836,662...20,843,388
Ensembl chr14:20,836,660...20,843,385
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 ISO (PMID:14699081), (PMID:20810912) UniProtKB PMID:14699081, PMID:20810912 NCBI chr18:66,458,604...66,465,558
Ensembl chr18:66,458,533...66,465,565
JBrowse link
G Ppard peroxisome proliferator activator receptor delta IGI (MGI:MGI:5528778|PMID:24011070) MGI PMID:24011070 MGI:MGI:5528778 NCBI chr17:28,232,754...28,301,469
Ensembl chr17:28,232,700...28,301,474
JBrowse link
G Ppargc1a peroxisome proliferative activated receptor, gamma, coactivator 1 alpha ISO RGD PMID:22527940 RGD:7242177 NCBI chr 5:51,454,249...52,115,853
Ensembl chr 5:51,454,250...51,567,726
JBrowse link
G Prkaa1 protein kinase, AMP-activated, alpha 1 catalytic subunit ISO RGD PMID:17720864 RGD:2316813 NCBI chr15:5,143,861...5,181,899
Ensembl chr15:5,143,861...5,181,899
JBrowse link
G Prkce protein kinase C, epsilon IDA (MGI:MGI:3776183|PMID:18070622) MGI PMID:18070622 MGI:MGI:3776183 NCBI chr17:86,167,785...86,657,919
Ensembl chr17:86,167,785...86,657,919
JBrowse link
G Pten phosphatase and tensin homolog IDA (MGI:MGI:5584033|PMID:24875179) MGI PMID:24875179 MGI:MGI:5584033 NCBI chr19:32,757,577...32,826,160
Ensembl chr19:32,757,497...32,826,160
JBrowse link
G Ptgis prostaglandin I2 (prostacyclin) synthase ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:167,203,194...167,252,150
Ensembl chr 2:167,191,805...167,240,604
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO (PMID:21296955) UniProtKB PMID:21296955 NCBI chr 1:150,100,031...150,108,234
Ensembl chr 1:150,100,031...150,108,227
JBrowse link
G Ptn pleiotrophin ISO RGD PMID:16226713, PMID:17925408 RGD:10044023, RGD:9834996 NCBI chr 6:36,714,924...36,810,179
Ensembl chr 6:36,714,929...36,810,220
JBrowse link
G Rgcc regulator of cell cycle ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:79,288,750...79,301,635
Ensembl chr14:79,288,756...79,301,645
JBrowse link
G Rnf146 ring finger protein 146 ISO RGD PMID:26218637 RGD:13524866 NCBI chr10:29,344,176...29,362,442
Ensembl chr10:29,344,176...29,362,442
JBrowse link
G Rora RAR-related orphan receptor alpha ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:68,653,404...69,388,246
Ensembl chr 9:68,653,786...69,388,246
JBrowse link
G Rtn4 reticulon 4 IDA (MGI:MGI:6274961|PMID:27763637) UniProt PMID:27763637 MGI:MGI:6274961 NCBI chr11:29,692,898...29,744,414
Ensembl chr11:29,692,947...29,744,331
JBrowse link
G S100b S100 protein, beta polypeptide, neural ISO RGD PMID:19910580 RGD:2325647 NCBI chr10:76,253,836...76,261,319
Ensembl chr10:76,253,853...76,261,159
JBrowse link
G Scn2a sodium channel, voltage-gated, type II, alpha ISO MGI GO_REF:0000096, MGI:MGI:4417868 NCBI chr 2:65,620,764...65,767,447
Ensembl chr 2:65,620,771...65,767,447
JBrowse link
G Sdhd succinate dehydrogenase complex, subunit D, integral membrane protein IMP (MGI:MGI:3525749|PMID:15572694) MGI PMID:15572694 MGI:MGI:3525749 NCBI chr 9:50,596,340...50,603,849
Ensembl chr 9:50,596,357...50,603,812
JBrowse link
G Serpine1 serine (or cysteine) peptidase inhibitor, clade E, member 1 ISO RGD PMID:10590062 RGD:8547811 NCBI chr 5:137,061,504...137,072,272
Ensembl chr 5:137,061,504...137,072,268
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 ISO (PMID:11932307) UniProtKB PMID:11932307 NCBI chr 8:23,411,383...23,449,632
Ensembl chr 8:23,411,502...23,449,632
JBrowse link
G Sirt1 sirtuin 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr10:63,319,005...63,339,035
Ensembl chr10:63,319,005...63,381,704
JBrowse link
G Sirt2 sirtuin 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:28,766,752...28,788,665
Ensembl chr 7:28,766,735...28,788,661
JBrowse link
G Sirt4 sirtuin 4 ISO RGD PMID:24029877 RGD:9586053 NCBI chr 5:115,478,006...115,490,264
Ensembl chr 5:115,478,010...115,484,725
JBrowse link
G Slc11a2 solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 ISO RGD PMID:21325818 RGD:5688411 NCBI chr15:100,387,898...100,424,209
Ensembl chr15:100,387,898...100,425,072
JBrowse link
G Slc29a1 solute carrier family 29 (nucleoside transporters), member 1 ISO RGD PMID:10646513 RGD:1598899 NCBI chr17:45,585,200...45,599,618
Ensembl chr17:45,585,200...45,599,606
JBrowse link
G Slc2a4 solute carrier family 2 (facilitated glucose transporter), member 4 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr11:69,942,286...69,948,216
Ensembl chr11:69,942,539...69,948,188
JBrowse link
G Slc8a1 solute carrier family 8 (sodium/calcium exchanger), member 1 ISO RGD PMID:17394575 RGD:1642726 NCBI chr17:81,373,105...81,738,387
Ensembl chr17:81,373,105...81,738,377
JBrowse link
G Slc8a3 solute carrier family 8 (sodium/calcium exchanger), member 3 IDA (MGI:MGI:5693358|PMID:24101730) UniProtKB PMID:24101730 MGI:MGI:5693358 NCBI chr12:81,197,915...81,333,732
Ensembl chr12:81,197,915...81,333,180
JBrowse link
G Slc9a1 solute carrier family 9 (sodium/hydrogen exchanger), member 1 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 4:133,369,711...133,423,702
Ensembl chr 4:133,369,706...133,423,702
JBrowse link
G Src Rous sarcoma oncogene ISO RGD PMID:20380727 RGD:2324980 NCBI chr 2:157,423,906...157,471,838
Ensembl chr 2:157,418,444...157,471,862
JBrowse link
G Stc1 stanniocalcin 1 ISO RGD PMID:15485913 RGD:2324700 NCBI chr14:69,029,289...69,041,401
Ensembl chr14:69,029,238...69,041,804
JBrowse link
G Stc2 stanniocalcin 2 ISO RGD PMID:15485913 RGD:2324700 NCBI chr11:31,359,441...31,370,061
Ensembl chr11:31,357,307...31,370,074
JBrowse link
G Stub1 STIP1 homology and U-Box containing protein 1 ISO MGI GO_REF:0000096, MGI:MGI:4417868 NCBI chr17:25,830,634...25,832,919
Ensembl chr17:25,830,505...25,833,404
JBrowse link
G Suv39h1 suppressor of variegation 3-9 1 ISO (MGI:MGI:5050612|PMID:21402781) MGI PMID:21402781 MGI:MGI:5050612 NCBI chr  X:8,061,171...8,074,760
Ensembl chr  X:8,061,171...8,074,760
JBrowse link
G Suv39h2 suppressor of variegation 3-9 2 ISO (MGI:MGI:5050612|PMID:21402781) MGI PMID:21402781 MGI:MGI:5050612 NCBI chr 2:3,455,815...3,474,986
Ensembl chr 2:3,455,815...3,475,031
JBrowse link
G Tbl2 transducin (beta)-like 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 5:135,149,429...135,163,873
Ensembl chr 5:135,149,657...135,165,760
JBrowse link
G Tert telomerase reverse transcriptase ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr13:73,626,911...73,649,843
Ensembl chr13:73,626,911...73,649,843
JBrowse link
G Tigar Trp53 induced glycolysis regulatory phosphatase ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 6:127,085,116...127,109,552
Ensembl chr 6:127,085,116...127,109,557
JBrowse link
G Trp53 transformation related protein 53 ISO (PMID:20810912) UniProtKB PMID:20810912 NCBI chr11:69,580,348...69,591,873
Ensembl chr11:69,580,359...69,591,873
JBrowse link
G Trpc1 transient receptor potential cation channel, subfamily C, member 1 ISO RGD PMID:19889962 RGD:7247600 NCBI chr 9:95,705,072...95,750,386
Ensembl chr 9:95,705,082...95,750,375
JBrowse link
G Trpc6 transient receptor potential cation channel, subfamily C, member 6 ISO RGD PMID:19889962 RGD:7247600 NCBI chr 9:8,543,867...8,680,752
Ensembl chr 9:8,544,142...8,680,741
JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 IMP
ISO
(MGI:MGI:5284765|PMID:18297062) BHF-UCL
MGI
PMID:18297062 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5284765 NCBI chr12:33,957,671...33,959,831
Ensembl chr12:33,957,671...33,959,829
JBrowse link
G Ubqln1 ubiquilin 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr13:58,176,156...58,215,653
Ensembl chr13:58,176,156...58,215,653
JBrowse link
G Ucn2 urocortin 2 ISO RGD PMID:14519439 RGD:2306174 NCBI chr 9:108,986,163...108,987,164
Ensembl chr 9:108,986,010...108,987,164
JBrowse link
G Ucn3 urocortin 3 ISO RGD PMID:14519439 RGD:2306174 NCBI chr13:3,940,688...3,945,349
Ensembl chr13:3,940,688...3,945,349
JBrowse link
G Vasn vasorin IMP (MGI:MGI:5014460|PMID:21658601) MGI PMID:21658601 MGI:MGI:5014460 NCBI chr16:4,639,945...4,651,166
Ensembl chr16:4,639,941...4,650,802
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (MGI:MGI:1349503|PMID:10575000) MGI PMID:10575000 MGI:MGI:1349503 NCBI chr17:46,016,993...46,032,377
Ensembl chr17:46,016,993...46,032,369
JBrowse link
G Vldlr very low density lipoprotein receptor ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr19:27,216,480...27,254,231
Ensembl chr19:27,216,484...27,254,231
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr12:80,107,760...80,113,013
Ensembl chr12:80,107,754...80,113,013
JBrowse link
cellular response to oxygen-glucose deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm1 apoptosis-inducing factor, mitochondrion-associated 1 ISO RGD PMID:14526224 RGD:10047409 NCBI chr  X:48,474,944...48,513,563
Ensembl chr  X:48,474,944...48,513,563
JBrowse link
G Aqp3 aquaporin 3 IDA (MGI:MGI:5551666|PMID:24462679) MGI PMID:24462679 MGI:MGI:5551666 NCBI chr 4:41,092,724...41,098,183
Ensembl chr 4:41,092,722...41,098,183
JBrowse link
G Atf4 activating transcription factor 4 ISO RGD PMID:20444431 RGD:13464322 NCBI chr15:80,255,184...80,257,545
Ensembl chr15:80,255,184...80,257,541
JBrowse link
G Cacnb3 calcium channel, voltage-dependent, beta 3 subunit ISO RGD PMID:23421680 RGD:13514095 NCBI chr15:98,628,436...98,644,536
Ensembl chr15:98,630,840...98,644,529
JBrowse link
G Cbl Casitas B-lineage lymphoma ISO RGD PMID:24229686 RGD:11038824 NCBI chr 9:44,142,976...44,234,259
Ensembl chr 9:44,142,976...44,234,049
JBrowse link
G Dnm1l dynamin 1-like ISO RGD PMID:23658809 RGD:12738215 NCBI chr16:16,312,228...16,359,038
Ensembl chr16:16,312,230...16,358,959
JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 9:54,862,658...54,912,534
Ensembl chr 9:54,863,789...54,912,530
JBrowse link
G Mfn1 mitofusin 1 ISO RGD PMID:23658809 RGD:12738215 NCBI chr 3:32,529,443...32,579,225
Ensembl chr 3:32,529,465...32,579,239
JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:23658809 RGD:12738215 NCBI chr 4:147,873,586...147,904,909
Ensembl chr 4:147,873,599...147,904,704
JBrowse link
G Mir874 microRNA 874 IDA (MGI:MGI:5551666|PMID:24462679) MGI PMID:24462679 MGI:MGI:5551666 NCBI chr13:58,023,125...58,023,200
Ensembl chr13:58,023,125...58,023,200
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase ISO RGD PMID:28528966 RGD:13781879 NCBI chr12:32,820,335...32,853,369
Ensembl chr12:32,819,545...32,853,349
JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A ISO RGD PMID:21525936 RGD:10054236 NCBI chr 7:45,522,917...45,526,268
Ensembl chr 7:45,522,916...45,526,268
JBrowse link
G Tsc1 TSC complex subunit 1 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 2:28,640,993...28,691,172
Ensembl chr 2:28,641,228...28,691,167
JBrowse link
hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cybb cytochrome b-245, beta polypeptide ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr  X:9,435,252...9,487,766
Ensembl chr  X:9,435,252...9,487,771
JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit IDA (MGI:MGI:60478|PMID:8470821) MGI PMID:8470821 MGI:MGI:60478 NCBI chr12:73,901,324...73,947,554
Ensembl chr12:73,901,375...73,947,530
JBrowse link
G Pdk1 pyruvate dehydrogenase kinase, isoenzyme 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:71,873,215...71,903,858
Ensembl chr 2:71,873,224...71,903,858
JBrowse link
G Pdk3 pyruvate dehydrogenase kinase, isoenzyme 3 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:93,764,616...93,832,150
Ensembl chr  X:93,764,607...93,832,201
JBrowse link
intrinsic apoptotic signaling pathway in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip3 BCL2/adenovirus E1B interacting protein 3 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:138,890,836...138,909,506
Ensembl chr 7:138,890,836...138,909,519
JBrowse link
G Trp53 transformation related protein 53 IMP (MGI:MGI:4867601|PMID:20935145) MGI PMID:20935145 MGI:MGI:4867601 NCBI chr11:69,580,348...69,591,873
Ensembl chr11:69,580,359...69,591,873
JBrowse link
negative regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd34 CD34 antigen ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 1:194,938,821...194,961,292
Ensembl chr 1:194,938,819...194,961,279
JBrowse link
G Ddah1 dimethylarginine dimethylaminohydrolase 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 3:145,758,692...145,894,277
Ensembl chr 3:145,758,675...145,894,277
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr  X:101,640,011...101,684,351
Ensembl chr  X:101,640,060...101,684,351
JBrowse link
negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eno1 enolase 1, alpha non-neuron ISO (PMID:15459207) CAFA PMID:15459207 NCBI chr 4:150,236,708...150,248,879
Ensembl chr 4:150,236,721...150,248,879
JBrowse link
G Hyou1 hypoxia up-regulated 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
RGD
PMID:21873635 GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 9:44,379,490...44,392,369
Ensembl chr 9:44,379,490...44,392,369
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 9:64,185,769...64,253,605
Ensembl chr 9:64,185,770...64,253,631
JBrowse link
G Nol3 nucleolar protein 3 (apoptosis repressor with CARD domain) ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 8:105,276,145...105,281,939
Ensembl chr 8:105,276,140...105,281,939
JBrowse link
G Pink1 PTEN induced putative kinase 1 IMP (MGI:MGI:5558956|PMID:24553947) ParkinsonsUK-UCL PMID:24553947 MGI:MGI:5558956 NCBI chr 4:138,313,409...138,326,296
Ensembl chr 4:138,313,409...138,326,307
JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr15:99,392,947...99,410,049
Ensembl chr15:99,392,882...99,410,049
JBrowse link
negative regulation of hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Commd1 COMM domain containing 1 IMP (MGI:MGI:3713589|PMID:17371845) MGI PMID:17371845 MGI:MGI:3713589 NCBI chr11:22,899,728...22,984,539
Ensembl chr11:22,896,136...22,982,382
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor IMP (MGI:MGI:5618205|PMID:25186293) MGI PMID:25186293 MGI:MGI:5618205 NCBI chr 6:113,623,994...113,631,634
Ensembl chr 6:113,623,959...113,631,633
JBrowse link
negative regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr10:17,723,228...17,725,674
Ensembl chr10:17,723,218...17,725,674
JBrowse link
G Hif1an hypoxia-inducible factor 1, alpha subunit inhibitor ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr19:44,562,854...44,576,274
Ensembl chr19:44,562,850...44,576,274
JBrowse link
G Sirt2 sirtuin 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:28,766,752...28,788,665
Ensembl chr 7:28,766,735...28,788,661
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 6:113,623,994...113,631,634
Ensembl chr 6:113,623,959...113,631,633
JBrowse link
positive regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnk2 potassium channel, subfamily K, member 2 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 1:189,207,930...189,402,782
Ensembl chr 1:189,207,930...189,402,273
JBrowse link
positive regulation of hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rwdd3 RWD domain containing 3 IMP
ISO
(MGI:MGI:5569907|PMID:22009797) MGI PMID:22009797 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5569907 NCBI chr 3:121,155,397...121,171,781
Ensembl chr 3:121,155,398...121,171,695
JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo like kinase 3 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:117,128,655...117,133,963
Ensembl chr 4:117,128,655...117,133,963
JBrowse link
G Sirt2 sirtuin 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:28,766,752...28,788,665
Ensembl chr 7:28,766,735...28,788,661
JBrowse link
positive regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hif1a hypoxia inducible factor 1, alpha subunit ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr12:73,901,324...73,947,554
Ensembl chr12:73,901,375...73,947,530
JBrowse link
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:75,675,513...75,704,663
Ensembl chr 2:75,675,513...75,704,641
JBrowse link
G Notch1 notch 1 IDA (MGI:MGI:5319604|PMID:18299578) UniProtKB PMID:18299578 MGI:MGI:5319604 NCBI chr 2:26,457,902...26,503,822
Ensembl chr 2:26,457,903...26,516,663
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 5:53,555,779...53,657,445
Ensembl chr 5:53,466,152...53,657,362
JBrowse link
G Trp53 transformation related protein 53 IMP (MGI:MGI:4867601|PMID:20935145) MGI PMID:20935145 MGI:MGI:4867601 NCBI chr11:69,580,348...69,591,873
Ensembl chr11:69,580,359...69,591,873
JBrowse link
G Vegfa vascular endothelial growth factor A ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:46,016,993...46,032,377
Ensembl chr17:46,016,993...46,032,369
JBrowse link
regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajuba ajuba LIM protein ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:54,567,469...54,577,661
Ensembl chr14:54,567,472...54,577,558
JBrowse link
G Chchd2 coiled-coil-helix-coiled-coil-helix domain containing 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 5:129,881,161...129,887,470
Ensembl chr 5:129,881,156...129,887,470
JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit ISO RGD PMID:18054269 RGD:9068899 NCBI chr12:73,901,324...73,947,554
Ensembl chr12:73,901,375...73,947,530
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 IMP (MGI:MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:MGI:6271078 NCBI chr12:16,894,978...16,988,274
Ensembl chr12:16,894,895...16,987,823
JBrowse link
G Usp19 ubiquitin specific peptidase 19 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:108,490,607...108,502,337
Ensembl chr 9:108,490,602...108,502,337
JBrowse link
regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bach1 BTB and CNC homology 1, basic leucine zipper transcription factor 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr16:87,698,954...87,733,346
Ensembl chr16:87,698,945...87,733,346
JBrowse link
G Egr1 early growth response 1 IDA (MGI:MGI:3847400|PMID:18323529) MGI PMID:18323529 MGI:MGI:3847400 NCBI chr18:34,861,207...34,864,956
Ensembl chr18:34,859,823...34,864,984
JBrowse link
G Stox1 storkhead box 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr10:62,659,043...62,726,094
Ensembl chr10:62,659,043...62,726,128
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23369
    response to stimulus 10280
      response to abiotic stimulus 1537
        response to oxygen levels 548
          response to decreased oxygen levels 470
            cellular response to decreased oxygen levels 213
              cellular response to anoxia 4
              cellular response to hypoxia + 180
              cellular response to oxygen-glucose deprivation 13
              positive regulation of SREBP signaling pathway in response to decreased oxygen levels 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.