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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to decreased oxygen levels
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Accession:GO:0036294 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting a decline in the level of oxygen.
Comment:This term should be used when a decrease in oxygen levels is not considered a stress response. For a hypoxic stress response, consider instead 'cellular response to hypoxia ; GO:0071456'.
Synonyms:exact_synonym: cellular response to lowered oxygen levels


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cellular response to decreased oxygen levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO (MGI:MGI:5584033|PMID:24875179) RGD PMID:24875179 MGI:MGI:5584033 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Cpeb4 cytoplasmic polyadenylation element binding protein 4 IDA PMID:20937770 UniProt PMID:20937770 RGD:8553637 NCBI chr10:15,984,520...16,047,209
Ensembl chr10:15,987,921...16,046,033
JBrowse link
G Mir106a microRNA 106a ISO (MGI:MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:MGI:5693365 NCBI chr  X:140,117,891...140,117,968
Ensembl chr  X:140,117,891...140,117,968
JBrowse link
G Mir142 microRNA 142 ISO (MGI:MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:MGI:5693365 NCBI chr10:75,050,839...75,050,925
Ensembl chr10:75,050,832...75,050,942
JBrowse link
G Mir146a microRNA 146a ISO (MGI:MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:MGI:5693365 NCBI chr10:28,962,476...28,962,570
Ensembl chr10:28,962,476...28,962,570
JBrowse link
G Mir150 microRNA 150 ISO (MGI:MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:MGI:5693365 NCBI chr 1:101,115,974...101,116,058
Ensembl chr 1:101,115,974...101,116,058
JBrowse link
G Mir15b microRNA 15b ISO (MGI:MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:MGI:5693365 NCBI chr 2:165,605,923...165,606,020
Ensembl chr 2:165,605,923...165,606,020
JBrowse link
G Mir17 microRNA 17 ISO (MGI:MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:MGI:5693365 NCBI chr15:100,179,879...100,179,962
Ensembl chr15:100,179,879...100,179,962
JBrowse link
G Mir199a2 microRNA 199a-2 ISO (MGI:MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:MGI:5693365 NCBI chr13:80,125,487...80,125,596
Ensembl chr13:80,125,487...80,125,596
JBrowse link
G Mir204 microRNA 204 ISO (MGI:MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:MGI:5693365 NCBI chr 1:240,403,000...240,403,109
Ensembl chr 1:240,403,000...240,403,109
JBrowse link
G Mir20b microRNA 20b ISO (MGI:MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:MGI:5693365 NCBI chr  X:140,117,518...140,117,589
Ensembl chr  X:140,117,518...140,117,589
JBrowse link
G Mir21 microRNA 21 ISO (MGI:MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:MGI:5693365 NCBI chr10:73,902,210...73,902,301
Ensembl chr10:73,902,210...73,902,301
JBrowse link
G Mir221 microRNA 221 ISO (MGI:MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:MGI:5693365 NCBI chr  X:3,684,480...3,684,588
Ensembl chr  X:3,684,480...3,684,588
JBrowse link
G Mir222 microRNA 222 ISO (MGI:MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:MGI:5693365 NCBI chr  X:3,683,919...3,684,021
Ensembl chr  X:3,683,919...3,684,021
JBrowse link
G Mir223 microRNA 223 ISO (MGI:MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:MGI:5693365 NCBI chr  X:65,367,812...65,367,921
Ensembl chr  X:65,367,812...65,367,921
JBrowse link
G Mir31 microRNA 31 ISO (MGI:MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:MGI:5693365 NCBI chr 5:107,206,515...107,206,620 JBrowse link
G Mir499a microRNA 499a ISO (MGI:MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:MGI:5693365 NCBI chr 3:151,138,862...151,138,926
Ensembl chr 3:151,138,862...151,138,926
JBrowse link
G Pick1 protein interacting with PRKCA 1 IMP PMID:23843614 UniProt PMID:23843614 RGD:8553949 NCBI chr 7:120,465,472...120,484,824
Ensembl chr 7:120,465,130...120,484,840
JBrowse link
G Pten phosphatase and tensin homolog ISO (MGI:MGI:5584033|PMID:24875179) RGD PMID:24875179 MGI:MGI:5584033 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
cellular response to anoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator IEP RGD PMID:14975182 RGD:1599599 NCBI chr 4:42,693,263...42,860,679
Ensembl chr 4:42,692,836...42,860,676
JBrowse link
G Daxx death-domain associated protein IEP RGD PMID:17289031 RGD:9587773 NCBI chr20:5,480,103...5,485,962
Ensembl chr20:5,480,103...5,485,926
JBrowse link
G Eef2k eukaryotic elongation factor-2 kinase IEP RGD PMID:12194824 RGD:8553742 NCBI chr 1:190,780,211...190,839,926
Ensembl chr 1:190,780,236...190,842,324
JBrowse link
cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07004992.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:173,275,336...173,284,941 JBrowse link
G AABR07060833.1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 4:96,562,725...96,564,611 JBrowse link
G AC130253.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:37,582,706...37,583,167 JBrowse link
G Acaa2 acetyl-CoA acyltransferase 2 ISO
IEA
(PMID:18371312)
GO_REF:0000107
RGD
Ensembl
PMID:18371312 GO_REF:0000107 NCBI chr18:70,733,872...70,762,395
Ensembl chr18:70,733,872...70,762,395
JBrowse link
G Adam8 ADAM metallopeptidase domain 8 ISO (PMID:18566576) RGD PMID:18566576 NCBI chr 1:212,317,510...212,332,895
Ensembl chr 1:212,317,848...212,330,349
JBrowse link
G Adrb2 adrenoceptor beta 2 IDA RGD PMID:19098126 RGD:8548506 NCBI chr18:57,513,792...57,515,834
Ensembl chr18:57,513,793...57,515,834
JBrowse link
G Ak4 adenylate kinase 4 ISO
ISS
(PMID:19130895), (PMID:23474458), (PMID:26980435), (PMID:30696468)
GO_REF:0000024
RGD
UniProt
PMID:19130895, PMID:23474458, PMID:26980435, PMID:30696468 GO_REF:0000024 NCBI chr 5:120,250,318...120,309,153
Ensembl chr 5:120,250,616...120,305,897
JBrowse link
G Akt1 AKT serine/threonine kinase 1 IDA RGD PMID:20515660 RGD:5509097 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Angpt4 angiopoietin 4 ISO (PMID:12958144) RGD PMID:12958144 NCBI chr 3:147,421,724...147,455,670
Ensembl chr 3:147,422,095...147,455,670
JBrowse link
G Ankrd1 ankyrin repeat domain 1 IEP RGD PMID:19299913 RGD:5133278 NCBI chr 1:254,726,985...254,745,673
Ensembl chr 1:254,726,969...254,735,548
JBrowse link
G Aqp1 aquaporin 1 ISO
ISS
(PMID:18275976)
GO_REF:0000024
RGD
UniProt
PMID:18275976 GO_REF:0000024 NCBI chr 4:85,551,503...85,563,683
Ensembl chr 4:85,551,502...85,569,360
JBrowse link
G Aqp3 aquaporin 3 (Gill blood group) IEA
ISO
GO_REF:0000107
(PMID:24462679)
Ensembl
RGD
PMID:24462679 GO_REF:0000107 NCBI chr 5:57,423,735...57,429,252
Ensembl chr 5:57,423,734...57,429,245
JBrowse link
G Asl argininosuccinate lyase IEP RGD PMID:11097477 RGD:1599264 NCBI chr12:30,160,922...30,178,348
Ensembl chr12:30,165,694...30,178,341
JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b IEP RGD PMID:29300489 RGD:13792656 NCBI chr 2:208,566,385...208,577,147
Ensembl chr 2:208,566,385...208,577,146
JBrowse link
G Atp7a ATPase copper transporting alpha IEP RGD PMID:21346155 RGD:11341705 NCBI chr  X:77,076,085...77,193,644
Ensembl chr  X:77,076,106...77,193,644
JBrowse link
G B3gat1 beta-1,3-glucuronyltransferase 1 IEP RGD PMID:21400481 RGD:14390075 NCBI chr 8:27,777,024...27,804,368
Ensembl chr 8:27,777,179...27,804,515
JBrowse link
G Bad BCL2-associated agonist of cell death ISO
IBA
(PMID:20810912)
PMID:21873635
RGD PMID:20810912, PMID:21873635 RGD:13792537 NCBI chr 1:222,198,516...222,207,459
Ensembl chr 1:222,198,534...222,207,453
JBrowse link
G Bbc3 Bcl-2 binding component 3 ISO (PMID:20810912) RGD PMID:20810912 NCBI chr 1:78,261,491...78,267,802 JBrowse link
G Bcl2 BCL2, apoptosis regulator ISO
IEA
IEP
(MGI:MGI:77298|PMID:7595537)
GO_REF:0000107
with serum deprivation
RGD
Ensembl
PMID:7595537, PMID:20669351 GO_REF:0000107, MGI:MGI:77298, RGD:11353793 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Bcl2l1 Bcl2-like 1 IEP with serum deprivation RGD PMID:20669351 RGD:11353793 NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810
JBrowse link
G Bdkrb2 bradykinin receptor B2 IEP RGD PMID:19565561 RGD:4891057 NCBI chr 6:129,399,468...129,429,676
Ensembl chr 6:129,399,468...129,429,676
JBrowse link
G Bnip3 BCL2 interacting protein 3 IEP
ISO
UniProtKB:O60238 (PMID:19273585), (PMID:20436456) RGD PMID:19273585, PMID:20436456, PMID:17379825 RGD:9685412 NCBI chr 1:211,248,098...211,265,282
Ensembl chr 1:211,248,098...211,265,282
JBrowse link
G Bnip3l BCL2 interacting protein 3 like ISO UniProtKB:Q12983 (PMID:19273585) RGD PMID:19273585 NCBI chr15:43,643,897...43,667,123
Ensembl chr15:43,643,897...43,667,029
JBrowse link
G Brip1 BRCA1 interacting protein C-terminal helicase 1 IEP RGD PMID:12511571 RGD:11251702 NCBI chr10:73,507,009...73,632,742
Ensembl chr10:73,507,100...73,629,581
JBrowse link
G Casr calcium-sensing receptor IEP RGD PMID:21073657 RGD:7206834 NCBI chr11:67,188,204...67,262,261
Ensembl chr11:67,188,630...67,258,771
JBrowse link
G Cbs cystathionine beta synthase IDA PMID:20149843 UniProt PMID:20149843 RGD:8554341 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
G Ccna2 cyclin A2 IEP RGD PMID:25289051 RGD:10054493 NCBI chr 2:123,274,727...123,282,266
Ensembl chr 2:123,275,881...123,282,214
JBrowse link
G Ccnb1 cyclin B1 IEP RGD PMID:12374461 RGD:2316579 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator IEP RGD PMID:12031707 RGD:8663470 NCBI chr 9:65,534,608...65,586,395
Ensembl chr 9:65,534,704...65,587,251
JBrowse link
G Clca1 chloride channel accessory 1 IEP RGD PMID:18616988 RGD:4188872 NCBI chr 2:250,897,980...250,923,711
Ensembl chr 2:250,897,969...250,923,744
JBrowse link
G Cox4i2 cytochrome c oxidase subunit 4i2 IEP RGD PMID:23303788 RGD:11344908 NCBI chr 3:148,234,546...148,245,424
Ensembl chr 3:148,234,193...148,245,416
JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 ISO
ISS
(PMID:18752464)
GO_REF:0000024
(MGI:MGI:5543770|PMID:18752464)
RGD
UniProt
PMID:18752464 GO_REF:0000024, MGI:MGI:5543770 NCBI chr 1:143,171,457...143,278,485
Ensembl chr 1:143,171,264...143,278,485
JBrowse link
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 ISO
ISS
(PMID:18752464)
GO_REF:0000024
(MGI:MGI:5543770|PMID:18752464)
RGD
UniProt
PMID:18752464 GO_REF:0000024, MGI:MGI:5543770 NCBI chr14:72,327,929...72,382,519
Ensembl chr14:72,331,705...72,380,330
JBrowse link
G Cr1l complement C3b/C4b receptor 1 like ISO (MGI:MGI:4821502|PMID:20675597) RGD PMID:20675597 MGI:MGI:4821502 NCBI chr13:113,824,886...113,872,097
Ensembl chr13:113,824,892...113,872,097
JBrowse link
G Cybb cytochrome b-245 beta chain IEP RGD PMID:21302291 RGD:11040609 NCBI chr  X:14,578,330...14,610,049
Ensembl chr  X:14,578,264...14,612,547
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha IEP RGD PMID:24282625 RGD:9589039 NCBI chr 6:28,205,375...28,346,052
Ensembl chr 6:28,235,695...28,340,577
JBrowse link
G Drd1 dopamine receptor D1 IEP RGD PMID:20969567 RGD:7248614 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G E2f1 E2F transcription factor 1 IEP RGD PMID:19088195 RGD:2316261 NCBI chr 3:150,062,895...150,073,721
Ensembl chr 3:150,047,826...150,073,721
JBrowse link
G Edn1 endothelin 1 IEP RGD PMID:9551744 RGD:8662285 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:57,660,194...57,701,158
Ensembl chr19:57,662,278...57,699,113
JBrowse link
G Egln2 egl-9 family hypoxia-inducible factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:83,969,456...83,977,665
Ensembl chr 1:83,969,457...83,977,236
JBrowse link
G Egln3 egl-9 family hypoxia-inducible factor 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:75,050,329...75,075,795
Ensembl chr 6:75,050,329...75,075,795
JBrowse link
G Egr1 early growth response 1 IEP RGD PMID:21220915 RGD:5131857 NCBI chr18:27,657,903...27,660,101
Ensembl chr18:27,657,628...27,661,429
JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 IDA RGD PMID:10100614 RGD:10401146 NCBI chr16:68,954,860...68,968,248
Ensembl chr16:68,954,875...68,968,248
JBrowse link
G Eln elastin IEP RGD PMID:16055482 RGD:9585727 NCBI chr12:24,978,478...25,021,864
Ensembl chr12:24,978,483...25,021,863
JBrowse link
G Endog endonuclease G IEP RGD PMID:17379825 RGD:9685412 NCBI chr 3:8,741,833...8,744,414
Ensembl chr 3:8,741,766...8,744,592
JBrowse link
G Eno1 enolase 1 IDA PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chr 5:167,288,223...167,299,610
Ensembl chr 5:167,288,223...167,299,609
JBrowse link
G Epas1 endothelial PAS domain protein 1 IEP
IBA
ISS
ISO
IEA
PMID:21873635
GO_REF:0000024
(PMID:11573933)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:11573933, PMID:12099714, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:11041576, RGD:13792537 NCBI chr 6:10,306,508...10,385,239
Ensembl chr 6:10,306,405...10,387,265
JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha IEP RGD PMID:12752442 RGD:10401130 NCBI chr15:19,619,947...19,655,381
Ensembl chr15:19,619,973...19,655,381
JBrowse link
G Fabp1 fatty acid binding protein 1 ISO (PMID:16175609) RGD PMID:16175609 NCBI chr 4:99,063,181...99,066,957
Ensembl chr 4:99,063,181...99,066,954
JBrowse link
G Fam162a family with sequence similarity 162, member A ISO
IBA
(PMID:15082785)
PMID:21873635
(MGI:MGI:5319611|PMID:17316997)
RGD PMID:15082785, PMID:17316997, PMID:21873635 MGI:MGI:5319611, RGD:13792537 NCBI chr11:67,618,683...67,646,253
Ensembl chr11:67,618,625...67,646,253
JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:12031707 RGD:8663470 NCBI chr 1:252,589,785...252,624,790
Ensembl chr 1:252,589,785...252,624,790
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 IEP RGD PMID:11981751 RGD:634296 NCBI chr12:9,033,993...9,205,886
Ensembl chr12:9,034,308...9,205,905
JBrowse link
G Fmn2 formin 2 ISO (PMID:23375502) RGD PMID:23375502 NCBI chr13:92,569,256...92,887,302 JBrowse link
G Fndc1 fibronectin type III domain containing 1 IMP PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chr 1:47,605,211...47,687,499
Ensembl chr 1:47,605,262...47,687,504
JBrowse link
G Foxo3 forkhead box O3 IEP RGD PMID:24278276 RGD:10402204 NCBI chr20:46,428,078...46,519,156
Ensembl chr20:46,428,124...46,519,144
JBrowse link
G Gata6 GATA binding protein 6 IEA
ISO
GO_REF:0000107
(PMID:21127043)
Ensembl
RGD
PMID:21127043 GO_REF:0000107 NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338
JBrowse link
G Gnb1 G protein subunit beta 1 IDA PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chr 5:172,914,025...172,981,403
Ensembl chr 5:172,934,990...172,979,986
JBrowse link
G Gngt1 G protein subunit gamma transducin 1 IDA PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chr 4:28,972,339...28,975,419
Ensembl chr 4:28,972,434...28,975,419
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP
IBA
ISO
ISS
IMP
PMID:21873635
(PMID:11573933), (PMID:19528298), (PMID:19782034), (PMID:20810912), (PMID:20889502)
GO_REF:0000024
MGI:MGI:101884|MGI:MGI:2676890|MGI:MGI:3618742 (MGI:MGI:5528778|PMID:24011070)
RGD
UniProt
PMID:11573933, PMID:19528298, PMID:19782034, PMID:20810912, PMID:20889502, PMID:24011070, PMID:19220706, PMID:21873635, PMID:18248612 GO_REF:0000024, MGI:MGI:5528778, RGD:9068456, RGD:13792537, RGD:9068884 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Hif3a hypoxia inducible factor 3 subunit alpha NOT ISO
IBA
(PMID:11573933)
PMID:21873635
RGD PMID:11573933, PMID:21873635 RGD:13792537 NCBI chr 1:78,976,318...78,997,869
Ensembl chr 1:78,976,318...78,997,869
JBrowse link
G Higd1a HIG1 hypoxia inducible domain family, member 1A ISO (MGI:MGI:3654896|PMID:16815968), (MGI:MGI:5306879|PMID:21856340), (MGI:MGI:5643884|PMID:25683712) RGD PMID:16815968, PMID:21856340, PMID:25683712 MGI:MGI:3654896, MGI:MGI:5306879, MGI:MGI:5643884 NCBI chr 8:130,482,492...130,491,888
Ensembl chr 8:130,482,493...130,491,998
JBrowse link
G Hilpda hypoxia inducible lipid droplet-associated ISO (PMID:10690527) RGD PMID:10690527 NCBI chr 4:56,547,600...56,550,584
Ensembl chr 4:56,549,739...56,549,993
JBrowse link
G Hmox1 heme oxygenase 1 ISO (PMID:12511571) RGD PMID:12511571 NCBI chr19:14,508,634...14,515,455
Ensembl chr19:14,508,616...14,515,456
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IEP RGD PMID:24177414 RGD:10445837 NCBI chr 3:159,902,441...159,965,003
Ensembl chr 3:159,902,441...159,965,003
JBrowse link
G Hp1bp3 heterochromatin protein 1, binding protein 3 ISO
ISS
(PMID:25100860)
GO_REF:0000024
RGD
UniProt
PMID:25100860 GO_REF:0000024 NCBI chr 5:156,581,732...156,609,059
Ensembl chr 5:156,581,732...156,609,059
JBrowse link
G Hyou1 hypoxia up-regulated 1 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:10837345), (PMID:9020069)
Ensembl
RGD
PMID:9020069, PMID:10837345, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:48,699,796...48,711,912
Ensembl chr 8:48,699,769...48,711,910
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:20631551 RGD:8662392 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059
JBrowse link
G Il7 interleukin 7 IEP RGD PMID:19055876 RGD:10402937 NCBI chr 2:96,427,884...96,474,979
Ensembl chr 2:96,439,286...96,474,977
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 IEP RGD PMID:15793310 RGD:1579809 NCBI chr  X:156,716,469...156,726,367
Ensembl chr  X:156,716,604...156,725,977
JBrowse link
G Ireb2 iron responsive element binding protein 2 IEP RGD PMID:22159112 RGD:6893269 NCBI chr 8:59,450,974...59,503,634
Ensembl chr 8:59,420,123...59,501,118
JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 IEP RGD PMID:17285299 RGD:6482794 NCBI chr 4:140,247,297...140,580,749
Ensembl chr 4:140,247,313...140,580,748
JBrowse link
G Itpr2 inositol 1,4,5-trisphosphate receptor, type 2 IEP RGD PMID:17285299 RGD:6482794 NCBI chr 4:180,423,452...180,800,088
Ensembl chr 4:180,538,389...180,722,358
JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 IDA PMID:25352783 UniProt PMID:25352783 RGD:10047379 NCBI chr 4:48,309,283...48,816,804 JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 IEP RGD PMID:24705172 RGD:9831164 NCBI chr13:107,690,111...107,886,476
Ensembl chr13:107,690,087...107,886,476
JBrowse link
G Kcnk3 potassium two pore domain channel subfamily K member 3 IMP RGD PMID:12215606 RGD:2316539 NCBI chr 6:27,154,274...27,190,209
Ensembl chr 6:27,151,612...27,190,132
JBrowse link
G Kcnmb1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 IEP RGD PMID:19461047 RGD:10412041 NCBI chr10:18,910,586...18,922,856
Ensembl chr10:18,906,010...18,919,639
JBrowse link
G Lmna lamin A/C IEA
ISO
GO_REF:0000107
(PMID:20810912)
Ensembl
RGD
PMID:20810912 GO_REF:0000107 NCBI chr 2:187,842,884...187,863,552
Ensembl chr 2:187,842,885...187,863,516
JBrowse link
G Mdm2 MDM2 proto-oncogene ISO (PMID:20810912) RGD PMID:20810912 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
G Mdm4 MDM4 regulator of p53 ISO (PMID:20810912) RGD PMID:20810912 NCBI chr13:49,786,776...49,828,780
Ensembl chr13:49,792,794...49,828,720
JBrowse link
G Mfn1 mitofusin 1 IEP RGD PMID:27833818 RGD:12910766 NCBI chr 2:118,929,738...118,971,689
Ensembl chr 2:118,929,738...118,973,698
JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:28478070 RGD:12910733 NCBI chr 5:164,684,244...164,715,414
Ensembl chr 5:164,684,509...164,714,145
JBrowse link
G Mgarp mitochondria-localized glutamic acid-rich protein ISO (MGI:MGI:3850758|PMID:19528298) RGD PMID:19528298 MGI:MGI:3850758 NCBI chr 2:140,444,963...140,453,719
Ensembl chr 2:140,444,965...140,453,107
JBrowse link
G Mief1 mitochondrial elongation factor 1 IEP RGD PMID:25911325 RGD:12880381 NCBI chr 7:121,462,962...121,478,545
Ensembl chr 7:121,462,966...121,478,546
JBrowse link
G Mif macrophage migration inhibitory factor IEP RGD PMID:19462902 RGD:4890975 NCBI chr20:13,715,219...13,732,980
Ensembl chr20:13,732,198...13,732,859
JBrowse link
G Mir199a2 microRNA 199a-2 ISO MGI:MGI:101884|MGI:MGI:106918|MGI:MGI:2676890 (MGI:MGI:5528778|PMID:24011070) RGD PMID:24011070 MGI:MGI:5528778 NCBI chr13:80,125,487...80,125,596
Ensembl chr13:80,125,487...80,125,596
JBrowse link
G Mir223 microRNA 223 IEP RGD PMID:29608885 RGD:21408565 NCBI chr  X:65,367,812...65,367,921
Ensembl chr  X:65,367,812...65,367,921
JBrowse link
G Mpl MPL proto-oncogene, thrombopoietin receptor IEP RGD PMID:15642952 RGD:10449018 NCBI chr 5:137,268,412...137,282,032
Ensembl chr 5:137,269,480...137,281,298
JBrowse link
G Mst1 macrophage stimulating 1 IEP RGD PMID:23647599 RGD:10448278 NCBI chr 8:116,857,716...116,862,286
Ensembl chr 8:116,857,684...116,862,423
JBrowse link
G Mt3 metallothionein 3 ISO (PMID:18206644) RGD PMID:18206644 NCBI chr19:11,324,708...11,326,112
Ensembl chr19:11,324,698...11,326,139
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO
ISS
(MGI:MGI:3654795|PMID:16915281)
GO_REF:0000024
RGD
UniProt
PMID:16915281 GO_REF:0000024, MGI:MGI:3654795 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO (PMID:15459207) RGD PMID:15459207 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Myocd myocardin IEP RGD PMID:20621093 RGD:5132874 NCBI chr10:51,682,053...51,781,458
Ensembl chr10:51,683,540...51,778,986
JBrowse link
G Ndnf neuron-derived neurotrophic factor ISO (PMID:24706764) RGD PMID:24706764 NCBI chr 4:96,528,830...96,565,780 JBrowse link
G Ndrg1 N-myc downstream regulated 1 ISO (PMID:20810912) RGD PMID:20810912 NCBI chr 7:107,734,326...107,775,701
Ensembl chr 7:107,734,323...107,775,714
JBrowse link
G Nfe2l2 nuclear factor, erythroid 2-like 2 IEP RGD PMID:23904790 RGD:10412703 NCBI chr 3:62,497,568...62,525,146
Ensembl chr 3:62,497,571...62,524,996
JBrowse link
G Nkx3-1 NK3 homeobox 1 ISO (PMID:21056661) RGD PMID:21056661 NCBI chr15:51,065,316...51,067,908
Ensembl chr15:51,065,316...51,068,421
JBrowse link
G Nog noggin IEP RGD PMID:25740156 RGD:12801489 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Nol3 nucleolar protein 3 IDA PMID:22082675 UniProt PMID:22082675 RGD:10047303 NCBI chr19:37,232,567...37,236,668
Ensembl chr19:37,235,001...37,236,649
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor ISO (PMID:22522597) RGD PMID:22522597 NCBI chr 1:77,836,522...77,843,991
Ensembl chr 1:77,836,196...77,844,189
JBrowse link
G Npepps aminopeptidase puromycin sensitive ISO (PMID:21056661) RGD PMID:21056661 NCBI chr10:85,140,368...85,222,861
Ensembl chr10:85,140,370...85,222,861
JBrowse link
G Npm1 nucleophosmin 1 IEP RGD PMID:21444791 RGD:11535018 NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950
JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase IEP RGD PMID:27833818 RGD:12910766 NCBI chr11:74,717,600...74,793,902
Ensembl chr11:74,720,254...74,793,803
JBrowse link
G Oprd1 opioid receptor, delta 1 ISO (PMID:24613828) RGD PMID:24613828 NCBI chr 5:150,288,126...150,323,063
Ensembl chr 5:150,288,126...150,323,063
JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta ISO (PMID:12095988) RGD PMID:12095988 NCBI chr10:109,736,459...109,748,070
Ensembl chr10:109,736,458...109,747,987
JBrowse link
G Palld palladin, cytoskeletal associated protein IEP RGD PMID:16481593 RGD:2325785 NCBI chr16:31,865,712...31,948,168 JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 IEP RGD PMID:24177414 RGD:10445837 NCBI chr 3:171,213,936...171,219,885
Ensembl chr 3:171,213,936...171,219,871
JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 IEP RGD PMID:23647599 RGD:10448278 NCBI chr 1:1,734,863...1,767,759
Ensembl chr 1:1,736,276...1,767,618
JBrowse link
G Pgk1 phosphoglycerate kinase 1 ISO (PMID:11130727) RGD PMID:11130727 NCBI chr  X:77,263,399...77,279,373
Ensembl chr  X:77,263,359...77,279,367
JBrowse link
G Phb2 prohibitin 2 IEP RGD PMID:25031298 RGD:12903263 NCBI chr 4:157,230,769...157,235,375
Ensembl chr 4:157,230,769...157,235,367
JBrowse link
G Pink1 PTEN induced kinase 1 ISO (PMID:24553947)
(MGI:MGI:5558956|PMID:24553947)
RGD PMID:24553947 MGI:MGI:5558956 NCBI chr 5:156,677,146...156,689,258
Ensembl chr 5:156,677,146...156,689,415
JBrowse link
G Plau plasminogen activator, urokinase IEP RGD PMID:19490965 RGD:7241802 NCBI chr15:3,644,296...3,650,765
Ensembl chr15:3,644,769...3,650,819
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 ISO (PMID:14699081), (PMID:20810912) RGD PMID:14699081, PMID:20810912 NCBI chr18:62,159,128...62,179,635
Ensembl chr18:62,174,670...62,181,102
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta ISO MGI:MGI:106918|MGI:MGI:2676890|MGI:MGI:3618742 (MGI:MGI:5528778|PMID:24011070) RGD PMID:24011070 MGI:MGI:5528778 NCBI chr20:7,818,289...7,883,482
Ensembl chr20:7,818,289...7,885,333
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:22527940 RGD:7242177 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 IEP RGD PMID:17720864 RGD:2316813 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404
JBrowse link
G Prkce protein kinase C, epsilon ISO (MGI:MGI:3776183|PMID:18070622) RGD PMID:18070622 MGI:MGI:3776183 NCBI chr 6:9,483,400...9,973,396
Ensembl chr 6:9,790,422...9,973,396
JBrowse link
G Pten phosphatase and tensin homolog ISO (MGI:MGI:5584033|PMID:24875179) RGD PMID:24875179 MGI:MGI:5584033 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Ptgis prostaglandin I2 synthase ISO
ISS
(PMID:21296955)
GO_REF:0000024
RGD
UniProt
PMID:21296955 GO_REF:0000024 NCBI chr 3:163,950,746...163,986,129 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO (PMID:21296955) RGD PMID:21296955 NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
JBrowse link
G Ptn pleiotrophin IEP RGD PMID:16226713, PMID:17925408 RGD:9834996, RGD:10044023 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Rgcc regulator of cell cycle ISO (PMID:19652095) RGD PMID:19652095 NCBI chr15:61,551,861...61,564,695
Ensembl chr15:61,551,861...61,564,695
JBrowse link
G RGD1306484 similar to growth and transformation-dependent protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:37,582,678...37,583,232 JBrowse link
G Rnf146 ring finger protein 146 IEP RGD PMID:26218637 RGD:13524866 NCBI chr 1:30,856,923...30,873,814
Ensembl chr 1:30,863,217...30,873,808
JBrowse link
G Rora RAR-related orphan receptor A ISO (PMID:18658046) RGD PMID:18658046 NCBI chr 8:75,515,886...75,616,477
Ensembl chr 8:75,516,904...75,607,212
JBrowse link
G Rtn4 reticulon 4 ISS
ISO
GO_REF:0000024
(MGI:MGI:6274961|PMID:27763637)
UniProt
RGD
PMID:27763637 GO_REF:0000024, MGI:MGI:6274961 NCBI chr14:114,126,931...114,174,459
Ensembl chr14:114,126,943...114,174,458
JBrowse link
G S100b S100 calcium binding protein B IEP RGD PMID:19910580 RGD:2325647 NCBI chr20:13,130,633...13,142,856
Ensembl chr20:13,130,636...13,142,856
JBrowse link
G Scn2a sodium voltage-gated channel alpha subunit 2 IDA PMID:28029095 UniProt PMID:28029095 RGD:14390052 NCBI chr 3:51,687,910...51,822,008
Ensembl chr 3:51,687,809...51,822,250
JBrowse link
G Sdhd succinate dehydrogenase complex subunit D ISO MGI:MGI:3526521 (MGI:MGI:3525749|PMID:15572694) RGD PMID:15572694 MGI:MGI:3525749 NCBI chr 8:55,028,125...55,037,604
Ensembl chr 8:55,028,125...55,037,604
JBrowse link
G Serpine1 serpin family E member 1 IEP RGD PMID:10590062 RGD:8547811 NCBI chr12:22,641,104...22,651,482
Ensembl chr12:22,641,104...22,651,482
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 IEA
ISO
GO_REF:0000107
(PMID:11932307)
Ensembl
RGD
PMID:11932307 GO_REF:0000107 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Sirt1 sirtuin 1 ISO
IEA
(PMID:20620956)
GO_REF:0000107
RGD
Ensembl
PMID:20620956 GO_REF:0000107 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Sirt2 sirtuin 2 ISO
ISS
(PMID:24681946)
GO_REF:0000024
RGD
UniProt
PMID:24681946 GO_REF:0000024 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link
G Sirt4 sirtuin 4 IEP RGD PMID:24029877 RGD:9586053 NCBI chr12:46,862,358...46,876,593
Ensembl chr12:46,868,416...46,876,592
JBrowse link
G Slc11a2 solute carrier family 11 member 2 IEP RGD PMID:21325818 RGD:5688411 NCBI chr 7:142,025,812...142,062,892
Ensembl chr 7:142,025,815...142,063,212
JBrowse link
G Slc29a1 solute carrier family 29 member 1 IEP RGD PMID:10646513 RGD:1598899 NCBI chr 9:17,784,468...17,799,008
Ensembl chr 9:17,784,468...17,799,005
JBrowse link
G Slc2a4 solute carrier family 2 member 4 IDA RGD PMID:20868366 RGD:7349316 NCBI chr10:56,552,921...56,558,562
Ensembl chr10:56,552,983...56,558,487
JBrowse link
G Slc8a1 solute carrier family 8 member A1 IEP RGD PMID:17394575 RGD:1642726 NCBI chr 6:4,244,076...4,564,262
Ensembl chr 6:4,258,991...4,520,604
JBrowse link
G Slc8a3 solute carrier family 8 member A3 ISO
ISS
(MGI:MGI:5693358|PMID:24101730)
GO_REF:0000024
RGD
UniProt
PMID:24101730 GO_REF:0000024, MGI:MGI:5693358 NCBI chr 6:104,889,500...105,099,408
Ensembl chr 6:104,891,376...105,097,054
JBrowse link
G Slc9a1 solute carrier family 9 member A1 IDA RGD PMID:20868366 RGD:7349316 NCBI chr 5:151,573,122...151,626,360
Ensembl chr 5:151,573,092...151,627,316
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IEP RGD PMID:20380727 RGD:2324980 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Stc1 stanniocalcin 1 IEP RGD PMID:15485913 RGD:2324700 NCBI chr15:50,891,137...50,901,791
Ensembl chr15:50,891,127...50,903,162
JBrowse link
G Stc2 stanniocalcin 2 IEP RGD PMID:15485913 RGD:2324700 NCBI chr10:16,542,909...16,552,675
Ensembl chr10:16,542,882...16,553,295
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 IDA PMID:19953350 ARUK-UCL PMID:19953350 RGD:13507303 NCBI chr10:15,197,754...15,200,035
Ensembl chr10:15,197,803...15,200,117
JBrowse link
G Suv39h1 suppressor of variegation 3-9 homolog 1 ISO (PMID:21402781) RGD PMID:21402781 NCBI chr  X:146,532,002...146,533,538 JBrowse link
G Suv39h1l1 suppressor of variegation 3-9 homolog 1 (Drosophila)-like 1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr  X:15,171,280...15,185,191
Ensembl chr  X:15,171,499...15,185,191
JBrowse link
G Suv39h2 suppressor of variegation 3-9 homolog 2 ISO (PMID:21402781) RGD PMID:21402781 NCBI chr17:78,762,897...78,782,016
Ensembl chr17:78,762,991...78,782,016
JBrowse link
G Tbl2 transducin (beta)-like 2 ISO (PMID:25393282) RGD PMID:25393282 NCBI chr12:24,565,843...24,578,855
Ensembl chr12:24,565,849...24,578,786
JBrowse link
G Tert telomerase reverse transcriptase ISO
IEP
(PMID:11313459) RGD PMID:11313459, PMID:24376652 RGD:11038675 NCBI chr 1:32,250,876...32,275,330
Ensembl chr 1:32,251,714...32,272,476
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase ISO (PMID:23185017) RGD PMID:23185017 NCBI chr 4:159,635,145...159,654,108
Ensembl chr 4:159,635,153...159,654,063
JBrowse link
G Tp53 tumor protein p53 ISO (PMID:20810912) RGD PMID:20810912 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Trpc1 transient receptor potential cation channel, subfamily C, member 1 IEP RGD PMID:19889962 RGD:7247600 NCBI chr 8:103,503,982...103,554,905
Ensembl chr 8:103,503,985...103,554,468
JBrowse link
G Trpc6 transient receptor potential cation channel, subfamily C, member 6 IEP RGD PMID:19889962 RGD:7247600 NCBI chr 8:6,811,543...6,917,534
Ensembl chr 8:6,811,543...6,917,535
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (MGI:MGI:5284765|PMID:18297062)
(PMID:18297062)
RGD PMID:18297062 MGI:MGI:5284765 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Ubqln1 ubiquilin 1 ISO
ISS
IEA
(PMID:12095988)
GO_REF:0000024
GO_REF:0000107
RGD
BHF-UCL
Ensembl
PMID:12095988 GO_REF:0000024, GO_REF:0000107 NCBI chr17:6,840,441...6,878,842
Ensembl chr17:6,840,463...6,878,844
JBrowse link
G Ucn2 urocortin 2 IEP RGD PMID:14519439 RGD:2306174 NCBI chr 8:117,727,216...117,728,765
Ensembl chr 8:117,727,877...117,728,764
JBrowse link
G Ucn3 urocortin 3 IEP RGD PMID:14519439 RGD:2306174 NCBI chr17:69,959,879...69,966,532
Ensembl chr17:69,960,160...69,966,099
JBrowse link
G Vasn vasorin ISO MGI:MGI:5140849 (MGI:MGI:5014460|PMID:21658601) RGD PMID:21658601 MGI:MGI:5014460 NCBI chr10:11,121,041...11,131,548
Ensembl chr10:11,121,041...11,131,548
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (PMID:10575000) RGD PMID:10575000 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Vldlr very low density lipoprotein receptor IDA RGD PMID:19233325 RGD:2324641 NCBI chr 1:245,236,819...245,273,688
Ensembl chr 1:245,237,736...245,269,205
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 ISO
ISS
(PMID:21832157)
GO_REF:0000024
RGD
UniProt
PMID:21832157 GO_REF:0000024 NCBI chr 6:103,308,032...103,313,074
Ensembl chr 6:103,308,045...103,313,074
JBrowse link
cellular response to oxygen-glucose deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm1 apoptosis inducing factor, mitochondria associated 1 IEP RGD PMID:14526224 RGD:10047409 NCBI chr  X:135,304,063...135,343,062
Ensembl chr  X:135,304,066...135,343,087
JBrowse link
G Aqp3 aquaporin 3 (Gill blood group) ISO
IEA
(MGI:MGI:5551666|PMID:24462679)
GO_REF:0000107
RGD
Ensembl
PMID:24462679 GO_REF:0000107, MGI:MGI:5551666 NCBI chr 5:57,423,735...57,429,252
Ensembl chr 5:57,423,734...57,429,245
JBrowse link
G Atf4 activating transcription factor 4 IEP RGD PMID:20444431 RGD:13464322 NCBI chr 7:121,480,723...121,482,781
Ensembl chr 7:121,480,723...121,482,772
JBrowse link
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 IEP RGD PMID:23421680 RGD:13514095 NCBI chr 7:140,311,120...140,324,902
Ensembl chr 7:140,315,368...140,324,902
JBrowse link
G Cbl Cbl proto-oncogene IEP RGD PMID:24229686 RGD:11038824 NCBI chr 8:48,481,256...48,564,775
Ensembl chr 8:48,489,036...48,564,722
JBrowse link
G Dnm1l dynamin 1-like IEP RGD PMID:23658809 RGD:12738215 NCBI chr11:88,830,968...88,882,271
Ensembl chr11:88,830,957...88,880,198
JBrowse link
G Ireb2 iron responsive element binding protein 2 IDA RGD PMID:16135072 RGD:12904046 NCBI chr 8:59,450,974...59,503,634
Ensembl chr 8:59,420,123...59,501,118
JBrowse link
G Mfn1 mitofusin 1 IEP RGD PMID:23658809 RGD:12738215 NCBI chr 2:118,929,738...118,971,689
Ensembl chr 2:118,929,738...118,973,698
JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:23658809 RGD:12738215 NCBI chr 5:164,684,244...164,715,414
Ensembl chr 5:164,684,509...164,714,145
JBrowse link
G Mir874 microRNA 874 ISO (MGI:MGI:5551666|PMID:24462679) RGD PMID:24462679 MGI:MGI:5551666 NCBI chr17:7,025,014...7,025,089
Ensembl chr17:7,025,014...7,025,089
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase IEP RGD PMID:28528966 RGD:13781879 NCBI chr 6:52,122,085...52,156,473
Ensembl chr 6:52,122,085...52,156,472
JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A IEP RGD PMID:21525936 RGD:10054236 NCBI chr 1:101,511,899...101,515,043
Ensembl chr 1:101,511,901...101,514,974
JBrowse link
G Tsc1 TSC complex subunit 1 IMP PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chr 3:7,219,955...7,269,063
Ensembl chr 3:7,237,192...7,265,145
JBrowse link
hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cybb cytochrome b-245 beta chain IMP RGD PMID:21302291 RGD:11040609 NCBI chr  X:14,578,330...14,610,049
Ensembl chr  X:14,578,264...14,612,547
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO
IEA
(MGI:MGI:60478|PMID:8470821)
GO_REF:0000107
RGD
Ensembl
PMID:8470821 GO_REF:0000107, MGI:MGI:60478 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Pdk1 pyruvate dehydrogenase kinase 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21763680)
Ensembl
UniProt
RGD
PMID:21763680 GO_REF:0000024, GO_REF:0000107 NCBI chr 3:58,530,870...58,561,494
Ensembl chr 3:58,530,870...58,558,027
JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 ISO (PMID:18718909) RGD PMID:18718909 NCBI chr  X:62,836,131...62,904,114
Ensembl chr  X:62,836,131...62,903,554
JBrowse link
intrinsic apoptotic signaling pathway in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip3 BCL2 interacting protein 3 ISO (PMID:20436456) RGD PMID:20436456 NCBI chr 1:211,248,098...211,265,282
Ensembl chr 1:211,248,098...211,265,282
JBrowse link
G Tp53 tumor protein p53 ISO (MGI:MGI:4867601|PMID:20935145) RGD PMID:20935145 MGI:MGI:4867601 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
negative regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd34 CD34 molecule ISO
ISS
(PMID:17505307)
GO_REF:0000024
RGD
UniProt
PMID:17505307 GO_REF:0000024 NCBI chr13:113,691,842...113,711,259
Ensembl chr13:113,691,932...113,711,647
JBrowse link
G Ddah1 dimethylarginine dimethylaminohydrolase 1 ISO (PMID:24895913) RGD PMID:24895913 NCBI chr 2:251,634,368...251,766,009
Ensembl chr 2:251,634,431...251,766,014
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase IMP RGD PMID:18539296 RGD:9590185 NCBI chr  X:71,540,870...71,585,906
Ensembl chr  X:71,528,988...71,585,908
JBrowse link
negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eno1 enolase 1 ISO UniProtKB:Q01986 (PMID:15459207) RGD PMID:15459207 NCBI chr 5:167,288,223...167,299,610
Ensembl chr 5:167,288,223...167,299,609
JBrowse link
G Hyou1 hypoxia up-regulated 1 ISO
IBA
IEA
IDA
(PMID:10037731)
PMID:21873635
GO_REF:0000107
PMID:11231630
RGD
Ensembl
PMID:10037731, PMID:21873635, PMID:11231630 GO_REF:0000107, RGD:13792537, RGD:10047348 NCBI chr 8:48,699,796...48,711,912
Ensembl chr 8:48,699,769...48,711,910
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IGI
IMP
PMID:15459207 CAFA PMID:15459207, PMID:15459207 RGD:12793039, RGD:12793039 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Nol3 nucleolar protein 3 IDA PMID:10590251 UniProt PMID:10590251 RGD:10047155 NCBI chr19:37,232,567...37,236,668
Ensembl chr19:37,235,001...37,236,649
JBrowse link
G Pink1 PTEN induced kinase 1 ISO (MGI:MGI:5558956|PMID:24553947) RGD PMID:24553947 MGI:MGI:5558956 NCBI chr 5:156,677,146...156,689,258
Ensembl chr 5:156,677,146...156,689,415
JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 ISO
IEA
(PMID:21075086)
GO_REF:0000107
RGD
Ensembl
PMID:21075086 GO_REF:0000107 NCBI chr 7:141,039,433...141,070,269
Ensembl chr 7:141,034,982...141,069,989
JBrowse link
negative regulation of hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Commd1 copper metabolism domain containing 1 ISO MGI:MGI:3714157 (MGI:MGI:3713589|PMID:17371845) RGD PMID:17371845 MGI:MGI:3713589 NCBI chr14:107,664,321...107,759,974
Ensembl chr14:107,664,255...107,760,191
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO MGI:MGI:2136645|MGI:MGI:3608931 (MGI:MGI:5618205|PMID:25186293) RGD PMID:25186293 MGI:MGI:5618205 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845
JBrowse link
negative regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 ISO (PMID:22735262) RGD PMID:22735262 NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786
JBrowse link
G Hif1an hypoxia inducible factor 1 subunit alpha inhibitor ISO
IBA
(PMID:11641274)
PMID:21873635
RGD PMID:11641274, PMID:21873635 RGD:13792537 NCBI chr 1:264,309,214...264,319,269
Ensembl chr 1:264,309,214...264,319,267
JBrowse link
G Sirt2 sirtuin 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:24681946)
Ensembl
UniProt
RGD
PMID:24681946 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO (PMID:11641274) RGD PMID:11641274 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845
JBrowse link
positive regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnk2 potassium two pore domain channel subfamily K member 2 IMP RGD PMID:24705172 RGD:9831164 NCBI chr13:107,690,111...107,886,476
Ensembl chr13:107,690,087...107,886,476
JBrowse link
positive regulation of hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rwdd3 RWD domain containing 3 ISO
ISS
(MGI:MGI:5569907|PMID:22009797)
GO_REF:0000024
(PMID:23469069)
RGD
UniProt
PMID:22009797, PMID:23469069 GO_REF:0000024, MGI:MGI:5569907 NCBI chr 2:224,710,351...224,723,136
Ensembl chr 2:224,710,348...224,723,112
JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo-like kinase 3 ISO
ISS
(PMID:20889502)
GO_REF:0000024
RGD
UniProt
PMID:20889502 GO_REF:0000024 NCBI chr 5:135,997,725...136,002,900
Ensembl chr 5:135,997,725...136,002,900
JBrowse link
G Sirt2 sirtuin 2 IEA
ISO
ISS
GO_REF:0000107
(PMID:24681946)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24681946 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link
positive regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hif1a hypoxia inducible factor 1 subunit alpha IEA
ISO
ISS
GO_REF:0000107
(PMID:19652095), (PMID:22735262), (PMID:24681946)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:19652095, PMID:22735262, PMID:24681946 GO_REF:0000024, GO_REF:0000107 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Nfe2l2 nuclear factor, erythroid 2-like 2 ISO (PMID:24844779) RGD PMID:24844779 NCBI chr 3:62,497,568...62,525,146
Ensembl chr 3:62,497,571...62,524,996
JBrowse link
G Notch1 notch receptor 1 ISO
ISS
(MGI:MGI:5319604|PMID:18299578)
GO_REF:0000024
RGD
UniProt
PMID:18299578 GO_REF:0000024, MGI:MGI:5319604 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO (PMID:23303788) RGD PMID:23303788 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
G Tp53 tumor protein p53 ISO (MGI:MGI:4867601|PMID:20935145) RGD PMID:20935145 MGI:MGI:4867601 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (PMID:19652095) RGD PMID:19652095 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajuba ajuba LIM protein ISO (PMID:22286099) RGD PMID:22286099 NCBI chr15:33,208,210...33,218,456
Ensembl chr15:33,208,216...33,218,456
JBrowse link
G Chchd2 coiled-coil-helix-coiled-coil-helix domain containing 2 ISO (PMID:23303788) RGD PMID:23303788 NCBI chr 9:101,388,148...101,388,819
Ensembl chr 9:101,388,151...101,388,833
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:18054269 RGD:9068899 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 ISO (MGI:MGI:6271078|PMID:29353861) RGD PMID:29353861 MGI:MGI:6271078 NCBI chr 6:42,180,864...42,289,910
Ensembl chr 6:42,180,894...42,289,908
JBrowse link
G Usp19 ubiquitin specific peptidase 19 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:22128162)
Ensembl
UniProt
RGD
PMID:22128162 GO_REF:0000024, GO_REF:0000107 NCBI chr 8:117,280,690...117,291,729
Ensembl chr 8:117,280,705...117,291,351
JBrowse link
regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bach1 BTB domain and CNC homolog 1 ISO (PMID:12511571) RGD PMID:12511571 NCBI chr11:27,364,913...27,398,713
Ensembl chr11:27,364,916...27,398,842
JBrowse link
G Egr1 early growth response 1 ISO
IEA
(MGI:MGI:3847400|PMID:18323529)
GO_REF:0000107
RGD
Ensembl
PMID:18323529 GO_REF:0000107, MGI:MGI:3847400 NCBI chr18:27,657,903...27,660,101
Ensembl chr18:27,657,628...27,661,429
JBrowse link
G Stox1 storkhead box 1 ISO (PMID:24738702) RGD PMID:24738702 NCBI chr20:32,276,857...32,353,677
Ensembl chr20:32,276,658...32,353,677
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    response to stimulus 10569
      response to abiotic stimulus 1507
        response to oxygen levels 534
          response to decreased oxygen levels 468
            cellular response to decreased oxygen levels 209
              cellular response to anoxia 3
              cellular response to hypoxia + 182
              cellular response to oxygen-glucose deprivation 13
              positive regulation of SREBP signaling pathway in response to decreased oxygen levels 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.