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ONTOLOGY REPORT - ANNOTATIONS


Term:histone citrullination
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Accession:GO:0036414 term browser browse the term
Definition:The hydrolysis of peptidyl-arginine to form peptidyl-citrulline on a histone protein.
Synonyms:exact_synonym: histone deimination


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histone citrullination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Padi1 peptidyl arginine deiminase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:159,338,850...159,371,313
Ensembl chr 5:159,338,850...159,371,313
JBrowse link
G Padi2 peptidyl arginine deiminase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:159,428,479...159,471,113
Ensembl chr 5:159,428,515...159,471,144
JBrowse link
G Padi3 peptidyl arginine deiminase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:159,309,000...159,336,429
Ensembl chr 5:159,309,000...159,336,429
JBrowse link
G Padi4 peptidyl arginine deiminase 4 ISO
IBA
ISS
(MGI:MGI:5545819|PMID:24463520)
PMID:21873635
GO_REF:0000024
(PMID:15339660), (PMID:16567635)
RGD
UniProt
PMID:15339660, PMID:16567635, PMID:24463520, PMID:21873635 GO_REF:0000024, MGI:MGI:5545819, RGD:13792537 NCBI chr 5:159,260,675...159,293,906
Ensembl chr 5:159,260,675...159,293,673
JBrowse link
G Padi6 peptidyl arginine deiminase 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:159,241,276...159,256,749
Ensembl chr 5:159,241,413...159,256,699
JBrowse link
histone H3-R26 citrullination term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Padi2 peptidyl arginine deiminase 2 IEA
ISO
GO_REF:0000107
(PMID:22853951)
Ensembl
RGD
PMID:22853951 GO_REF:0000107 NCBI chr 5:159,428,479...159,471,113
Ensembl chr 5:159,428,515...159,471,144
JBrowse link
G Padi4 peptidyl arginine deiminase 4 ISS
ISO
GO_REF:0000024
(PMID:15339660), (PMID:16567635)
UniProt
RGD
PMID:15339660, PMID:16567635 GO_REF:0000024 NCBI chr 5:159,260,675...159,293,906
Ensembl chr 5:159,260,675...159,293,673
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      organic substance metabolic process 11636
        macromolecule metabolic process 10081
          macromolecule modification 4142
            covalent chromatin modification 513
              histone modification 498
                histone citrullination 5
                  histone H3-R26 citrullination 2
Path 2
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      organic substance metabolic process 11636
        macromolecule metabolic process 10081
          cellular macromolecule metabolic process 8535
            cellular protein metabolic process 5552
              cellular protein modification process 3937
                peptidyl-amino acid modification 1316
                  peptidyl-arginine modification 29
                    protein citrullination 5
                      histone citrullination 5
                        histone H3-R26 citrullination 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.