Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   


Term:K48-linked polyubiquitin modification-dependent protein binding
go back to main search page
Accession:GO:0036435 term browser browse the term
Definition:Interacting selectively and non-covalently with a protein upon poly-ubiquitination formed by linkages between lysine residues at position 48 in the target protein.
Synonyms:xref: reactome:R-HSA-5683077 "RNF8 and RNF168 ubiquitinate KDM4A,B"

show annotations for term's descendants       view all columns           Sort by:
K48-linked polyubiquitin modification-dependent protein binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon JBrowse link 13 48,031,325 48,056,394 RGD:1624291
G Mindy1 MINDY lysine 48 deubiquitinase 1 JBrowse link 2 196,458,229 196,470,133 RGD:1624291
G Mindy2 MINDY lysine 48 deubiquitinase 2 JBrowse link 8 77,029,346 77,089,208 RGD:1624291
G Nploc4 NPL4 homolog, ubiquitin recognition factor JBrowse link 10 109,553,518 109,610,087 RGD:10047330
G Ubqln4 ubiquilin 4 JBrowse link 2 187,915,701 187,931,035 RGD:1624291
G Ubxn1 UBX domain protein 1 JBrowse link 1 225,067,953 225,071,944 RGD:1624291
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 JBrowse link 11 86,304,836 86,328,478 RGD:1624291
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:1624291
G Zfand2b zinc finger AN1-type containing 2B JBrowse link 9 82,370,887 82,373,843 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20377
    binding 16798
      protein binding 14233
        modification-dependent protein binding 186
          polyubiquitin modification-dependent protein binding 54
            K48-linked polyubiquitin modification-dependent protein binding 9
paths to the root


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.