Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:K48-linked polyubiquitin modification-dependent protein binding
go back to main search page
Accession:GO:0036435 term browser browse the term
Definition:Interacting selectively and non-covalently with a protein upon poly-ubiquitination formed by linkages between lysine residues at position 48 in the target protein.
Synonyms:xref: reactome:R-HSA-5683077 "RNF8 and RNF168 ubiquitinate KDM4A,B"


show annotations for term's descendants       view all columns           Sort by:
 
K48-linked polyubiquitin modification-dependent protein binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G IKBKE inhibitor of nuclear factor kappa B kinase subunit epsilon JBrowse link 9 67,123,055 67,147,991 RGD:14298760
G MINDY1 MINDY lysine 48 deubiquitinase 1 JBrowse link 4 98,218,616 98,231,356 RGD:14298760
G MINDY2 MINDY lysine 48 deubiquitinase 2 JBrowse link 1 113,171,047 113,258,761 RGD:14298760
G NPLOC4 NPL4 homolog, ubiquitin recognition factor JBrowse link 12 1,251,377 1,285,668 RGD:9068941
G UBQLN4 ubiquilin 4 JBrowse link 4 93,976,386 93,994,830 RGD:14298760
G UBXN1 UBX domain protein 1 JBrowse link 2 9,072,549 9,075,595 RGD:9068941
G UFD1 ubiquitin recognition factor in ER associated degradation 1 JBrowse link 14 51,113,858 51,132,820 RGD:14298760
G VCP valosin containing protein JBrowse link 1 235,854,532 235,869,712 RGD:14298760
G ZFAND2B zinc finger AN1-type containing 2B JBrowse link 15 121,243,116 121,246,075 RGD:14298760

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 17331
    binding 15087
      protein binding 13528
        modification-dependent protein binding 154
          polyubiquitin modification-dependent protein binding 55
            K48-linked polyubiquitin modification-dependent protein binding 9
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.