ONTOLOGY REPORT - ANNOTATIONS


Term:synaptic vesicle recycling
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Accession:GO:0036465 term browser browse the term
Definition:The trafficking of synaptic vesicles from the pre-synaptic membrane so the vesicle can dock and prime for another round of exocytosis and neurotransmitter release. Recycling occurs after synaptic vesicle exocytosis, and is necessary to replenish presynaptic vesicle pools, sustain transmitter release and preserve the structural integrity of the presynaptic membrane. Recycling can occur following transient fusion with the presynaptic membrane (kiss and run), or via endocytosis of presynaptic membrane.
Synonyms:narrow_synonym: kiss-and-run synaptic vesicle recycling;   kiss-and-stay synaptic vesicle recycling


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synaptic vesicle recycling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 JBrowse link X 32,329,883 32,376,301 RGD:1624291
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:8693376
G Rab5a RAB5A, member RAS oncogene family JBrowse link 9 5,910 6,065 RGD:1624291
G Syt7 synaptotagmin 7 JBrowse link 1 226,435,816 226,498,008 RGD:1624291
RGD:1600115
clathrin-dependent synaptic vesicle endocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Btbd8 BTB domain containing 8 JBrowse link 14 3,282,422 3,351,740 RGD:1600115
negative regulation of synaptic vesicle endocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Syt11 synaptotagmin 11 JBrowse link 2 188,112,301 188,138,180 RGD:11079192
negative regulation of synaptic vesicle recycling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyfip1 cytoplasmic FMR1 interacting protein 1 JBrowse link 1 114,258,773 114,347,138 RGD:11342679
G Stx1b syntaxin 1B JBrowse link 1 199,251,842 199,270,465 RGD:1624291
RGD:1600115
positive regulation of synaptic vesicle endocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap2m1 adaptor related protein complex 2 subunit mu 1 JBrowse link 11 84,041,184 84,047,542 RGD:13461856
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:12793033
G Dnm1 dynamin 1 JBrowse link 3 11,338,081 11,382,043 RGD:8554440
G Dnm1l dynamin 1-like JBrowse link 11 88,830,968 88,882,271 RGD:12793033
G LOC102556337 mitochondrial fission factor-like JBrowse link 9 90,880,586 90,908,848 RGD:12793033
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:13462049
G Mff mitochondrial fission factor JBrowse link 9 88,490,280 88,518,517 RGD:12793033
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:1624291
RGD:8554760
G Picalm phosphatidylinositol binding clathrin assembly protein JBrowse link 1 154,377,229 154,458,966 RGD:13506237
G Ppp3cc protein phosphatase 3 catalytic subunit gamma JBrowse link 15 51,896,427 51,968,075 RGD:11532172
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 JBrowse link 9 11,031,847 11,055,285 RGD:13464359
G Snap91 synaptosome associated protein 91 JBrowse link 8 94,447,558 94,564,772 RGD:13506237
G Tor1a torsin family 1, member A JBrowse link 3 9,800,322 9,807,318 RGD:1624291
RGD:1600115
positive regulation of synaptic vesicle recycling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnm1 dynamin 1 JBrowse link 3 11,338,081 11,382,043 RGD:8553820
G Dnm3 dynamin 3 JBrowse link 13 79,906,711 80,379,967 RGD:13462065
G Plaa phospholipase A2, activating protein JBrowse link 5 113,548,913 113,578,928 RGD:1624291
RGD:1600115
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gripap1 GRIP1 associated protein 1 JBrowse link X 15,523,929 15,553,702 RGD:12050105
regulation of synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc2a4 solute carrier family 2 member 4 JBrowse link 10 56,552,921 56,558,562 RGD:13702195
regulation of synaptic vesicle endocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Btbd9 BTB domain containing 9 JBrowse link 20 8,899,286 9,253,936 RGD:1624291
RGD:1600115
G Calm1 calmodulin 1 JBrowse link 6 124,217,241 124,225,292 RGD:12793033
G Calm2 calmodulin 2 JBrowse link 6 11,067,675 11,080,078 RGD:12793033
G Calm3 calmodulin 3 JBrowse link 1 78,844,520 78,851,628 RGD:12793033
G Dgkq diacylglycerol kinase, theta JBrowse link 14 2,069,409 2,083,370 RGD:1600115
RGD:1624291
G Dnm1 dynamin 1 JBrowse link 3 11,338,081 11,382,043 RGD:13504740
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:1624291
G Picalm phosphatidylinositol binding clathrin assembly protein JBrowse link 1 154,377,229 154,458,966 RGD:8554167
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma JBrowse link 7 11,267,207 11,294,291 RGD:1624291
G Ppp3cb protein phosphatase 3 catalytic subunit beta JBrowse link 15 4,209,702 4,236,895 RGD:1600115
RGD:1624291
G Ppp3cc protein phosphatase 3 catalytic subunit gamma JBrowse link 15 51,896,427 51,968,075 RGD:11532172
G Rock1 Rho-associated coiled-coil containing protein kinase 1 JBrowse link 18 1,273,490 1,390,790 RGD:1624291
RGD:1600115
G Scamp5 secretory carrier membrane protein 5 JBrowse link 8 62,221,820 62,266,269 RGD:13702419
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 JBrowse link 9 11,031,847 11,055,285 RGD:13463484
G Slc17a7 solute carrier family 17 member 7 JBrowse link 1 101,161,265 101,172,292 RGD:13504741
G Snap91 synaptosome associated protein 91 JBrowse link 8 94,447,558 94,564,772 RGD:8554167
G Syt7 synaptotagmin 7 JBrowse link 1 226,435,816 226,498,008 RGD:1624291
G Vamp4 vesicle-associated membrane protein 4 JBrowse link 13 80,460,699 80,483,597 RGD:11058152
regulation of synaptic vesicle recycling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgf14 fibroblast growth factor 14 JBrowse link 15 110,382,274 111,077,027 RGD:10047342
G Vamp2 vesicle-associated membrane protein 2 JBrowse link 10 55,675,171 55,679,405 RGD:13506237
synaptic vesicle budding from endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 JBrowse link X 32,329,883 32,376,301 RGD:1624291
G Ap3b1 adaptor related protein complex 3 subunit beta 1 JBrowse link 2 24,022,815 24,227,522 RGD:1600115
RGD:1624291
G Ap3d1 adaptor related protein complex 3 subunit delta 1 JBrowse link 7 11,838,639 11,873,992 RGD:12050120
RGD:13792537
RGD:1624291
G Btbd8 BTB domain containing 8 JBrowse link 14 3,282,422 3,351,740 RGD:1624291
synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnm1 dynamin 1 JBrowse link 3 11,338,081 11,382,043 RGD:1624291
RGD:13792537
G Dnm2 dynamin 2 JBrowse link 8 22,458,869 22,540,649 RGD:13792537
G Dnm3 dynamin 3 JBrowse link 13 79,906,711 80,379,967 RGD:1624291
RGD:13792537
G Eps15 epidermal growth factor receptor pathway substrate 15 JBrowse link 5 128,923,809 129,022,268 RGD:9685531
G Picalm phosphatidylinositol binding clathrin assembly protein JBrowse link 1 154,377,229 154,458,966 RGD:13792537
G Snap91 synaptosome associated protein 91 JBrowse link 8 94,447,558 94,564,772 RGD:1624291
RGD:13792537
synaptic vesicle coating term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cltb clathrin, light chain B JBrowse link 17 10,537,348 10,554,999 RGD:70686
synaptic vesicle endocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actb actin, beta JBrowse link 12 13,715,843 13,718,813 RGD:1624291
RGD:1600115
G Actg1 actin, gamma 1 JBrowse link 10 109,518,429 109,521,288 RGD:1624291
RGD:1600115
G Amph amphiphysin JBrowse link 17 48,304,324 48,562,838 RGD:1624291
RGD:13792537
G Ap2b1 adaptor related protein complex 2 subunit beta 1 JBrowse link 10 70,516,462 70,621,973 RGD:1624291
G Ap2m1 adaptor related protein complex 2 subunit mu 1 JBrowse link 11 84,041,184 84,047,542 RGD:12050109
G Arf6 ADP-ribosylation factor 6 JBrowse link 6 91,697,109 91,698,257 RGD:11556875
G Bin1 bridging integrator 1 JBrowse link 18 25,163,575 25,222,139 RGD:631926
G Btbd8 BTB domain containing 8 JBrowse link 14 3,282,422 3,351,740 RGD:1624291
G Canx calnexin JBrowse link 10 35,800,942 35,833,939 RGD:1600115
RGD:1624291
G Cd24 CD24 molecule JBrowse link 20 48,335,540 48,340,847 RGD:1624291
RGD:1600115
G Cdk5 cyclin-dependent kinase 5 JBrowse link 4 7,282,945 7,287,427 RGD:1358501
G Cel carboxyl ester lipase JBrowse link 3 7,134,021 7,141,522 RGD:13792537
G Cltc clathrin heavy chain JBrowse link 10 74,014,560 74,070,578 RGD:13702168
G Dennd1a DENN domain containing 1A JBrowse link 3 22,061,120 22,501,502 RGD:1624291
RGD:1600115
G Dnm1 dynamin 1 JBrowse link 3 11,338,081 11,382,043 RGD:1624291
G Dnm1l dynamin 1-like JBrowse link 11 88,830,968 88,882,271 RGD:12793033
G Dnm2 dynamin 2 JBrowse link 8 22,458,869 22,540,649 RGD:1624291
G Dnm3 dynamin 3 JBrowse link 13 79,906,711 80,379,967 RGD:1624291
G Fcho2 FCH domain only 2 JBrowse link 2 28,927,918 29,029,271 RGD:1624291
RGD:13792537
RGD:12050101
G Grn granulin precursor JBrowse link 10 90,377,103 90,383,207 RGD:5509044
G Itsn1 intersectin 1 JBrowse link 11 31,943,119 32,069,249 RGD:1624291
RGD:1600115
G LOC100361457 actin, gamma 1 propeptide-like JBrowse link 3 75,643,053 75,644,978 RGD:1600115
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:13792537
G Nlgn2 neuroligin 2 JBrowse link 10 56,431,586 56,444,847 RGD:13792537
G Nlgn3 neuroligin 3 JBrowse link X 71,199,390 71,227,460 RGD:13792537
G Ophn1 oligophrenin 1 JBrowse link X 68,185,865 68,579,518 RGD:1624291
RGD:13792537
G Pacsin1 protein kinase C and casein kinase substrate in neurons 1 JBrowse link 20 7,241,248 7,286,702 RGD:1600115
RGD:1624291
G Picalm phosphatidylinositol binding clathrin assembly protein JBrowse link 1 154,377,229 154,458,966 RGD:13506237
RGD:13792537
G Rab27b RAB27B, member RAS oncogene family JBrowse link 18 68,486,006 68,644,595 RGD:13432355
G RGD1307100 similar to RIKEN cDNA D630029K19 JBrowse link 2 123,555,742 123,766,675 RGD:13792537
G Scrib scribble planar cell polarity protein JBrowse link 7 117,105,810 117,128,802 RGD:1600115
RGD:1624291
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 JBrowse link 5 103,479,767 103,654,507 RGD:1624291
RGD:13702445
G Snap91 synaptosome associated protein 91 JBrowse link 8 94,447,558 94,564,772 RGD:13506237
RGD:13792537
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1600115
RGD:1624291
G Sncb synuclein, beta JBrowse link 17 10,384,472 10,392,776 RGD:1600115
RGD:1624291
G Ston2 stonin 2 JBrowse link 6 115,398,586 115,547,552 RGD:12050122
RGD:1600115
RGD:1624291
G Stx1a syntaxin 1A JBrowse link 12 24,682,050 24,710,002 RGD:1600115
RGD:1624291
G Synj1 synaptojanin 1 JBrowse link 11 31,105,784 31,181,573 RGD:1624291
RGD:13792537
RGD:1600115
G Syp synaptophysin JBrowse link X 15,694,699 15,709,244 RGD:1600115
RGD:1624291
G Syt1 synaptotagmin 1 JBrowse link 7 50,084,063 50,638,996 RGD:13792537
G Syt17 synaptotagmin 17 JBrowse link 1 188,034,614 188,101,590 RGD:13792537
G Syt2 synaptotagmin 2 JBrowse link 13 51,569,248 51,577,824 RGD:13792537
G Syt5 synaptotagmin 5 JBrowse link 1 72,859,806 72,867,934 RGD:13792537
G Syt8 synaptotagmin 8 JBrowse link 1 215,605,408 215,607,602 RGD:13792537
synaptic vesicle recycling via endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:12793033
G Btbd8 BTB domain containing 8 JBrowse link 14 3,282,422 3,351,740 RGD:1600115
G Dnm1l dynamin 1-like JBrowse link 11 88,830,968 88,882,271 RGD:12793033
synaptic vesicle uncoating term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 JBrowse link 5 120,330,372 120,492,515 RGD:1624291
RGD:13792537
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:10059325
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 JBrowse link 9 11,031,847 11,055,285 RGD:1624291
RGD:1600115
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 JBrowse link 5 103,479,767 103,654,507 RGD:1624291
RGD:1600115
G Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 JBrowse link 1 144,069,641 144,200,402 RGD:1624291
G Synj1 synaptojanin 1 JBrowse link 11 31,105,784 31,181,573 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17896
    localization 5958
      establishment of localization 4566
        transport 4429
          synaptic vesicle recycling 81
            negative regulation of synaptic vesicle recycling + 3
            positive regulation of synaptic vesicle recycling + 15
            regulation of synaptic vesicle recycling + 34
            synaptic vesicle endocytosis + 70
            synaptic vesicle recycling via endosome + 7
Path 2
Term Annotations click to browse term
  biological_process 17896
    localization 5958
      establishment of localization 4566
        establishment of localization in cell 1965
          synaptic vesicle cycle 242
            synaptic vesicle recycling 81
              negative regulation of synaptic vesicle recycling + 3
              positive regulation of synaptic vesicle recycling + 15
              regulation of synaptic vesicle recycling + 34
              synaptic vesicle endocytosis + 70
              synaptic vesicle recycling via endosome + 7
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.