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ONTOLOGY REPORT - ANNOTATIONS


Term:synaptic vesicle recycling via endosome
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Accession:GO:0036466 term browser browse the term
Definition:Synaptic vesicle recycling where vesicles endocytosed via clathrin-coated pits re-acidify and refill with neurotransmitters after passing through an endosomal intermediate.
Synonyms:exact_synonym: recycling endosome localization within postsynapse
 alt_id: GO:0099090


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synaptic vesicle recycling via endosome term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 Bcl2-like 1 IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810
JBrowse link
G Btbd8 BTB domain containing 8 ISS
ISO
GO_REF:0000024
(MGI:6104538|PMID:29262337)
UniProt
RGD
PMID:29262337 GO_REF:0000024, MGI:6104538 NCBI chr14:3,282,422...3,351,740
Ensembl chr14:3,284,089...3,300,200
JBrowse link
G Dnm1l dynamin 1-like IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr11:88,830,968...88,882,271
Ensembl chr11:88,830,957...88,880,198
JBrowse link
clathrin-dependent synaptic vesicle endocytosis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd8 BTB domain containing 8 ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000002
(MGI:6104538|PMID:29262337)
UniProt
InterPro
RGD
PMID:29262337 GO_REF:0000002, GO_REF:0000024, MGI:6104538 NCBI chr14:3,282,422...3,351,740
Ensembl chr14:3,284,089...3,300,200
JBrowse link
G Itsn1 intersectin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:31,943,119...32,069,249
Ensembl chr11:31,893,489...32,069,249
JBrowse link
G Itsn2 intersectin 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:30,098,378...30,208,694
Ensembl chr 6:30,098,380...30,187,337
JBrowse link
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gripap1 GRIP1 associated protein 1 IDA
IBA
IMP
PMID:20098723
PMID:21873635
SynGO
GO_Central
PMID:20098723, PMID:21873635, PMID:20098723 RGD:12050105, RGD:13792537, RGD:12050105 NCBI chr  X:15,523,929...15,553,702
Ensembl chr  X:15,523,929...15,553,720
JBrowse link
synaptic vesicle budding from endosome term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 ISO (MGI:5617942|PMID:20203623) RGD PMID:20203623 MGI:5617942 NCBI chr  X:32,329,883...32,376,301
Ensembl chr  X:32,329,598...32,355,307
JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 ISO (MGI:6189637|PMID:11588176) RGD PMID:11588176 MGI:6189637 NCBI chr 2:24,022,815...24,227,522
Ensembl chr 2:24,024,791...24,226,224
JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 IDA
ISO
IMP
IBA
PMID:22539861
(MGI:6189637|PMID:11588176)
PMID:21873635
RGD PMID:11588176, PMID:22539861, PMID:22539861, PMID:21873635 MGI:6189637, RGD:12050120, RGD:12050120, RGD:13792537 NCBI chr 7:11,838,639...11,873,992
Ensembl chr 7:11,838,639...11,873,984
JBrowse link
G Btbd8 BTB domain containing 8 ISO (MGI:6104538|PMID:29262337) RGD PMID:29262337 MGI:6104538 NCBI chr14:3,282,422...3,351,740
Ensembl chr14:3,284,089...3,300,200
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cellular localization 2966
        intracellular transport 1514
          synaptic vesicle recycling via endosome 9
            clathrin-dependent synaptic vesicle endocytosis 3
            endocytosed synaptic vesicle processing via endosome 0
            endocytosed synaptic vesicle to endosome fusion 0
            regulation of recycling endosome localization within postsynapse 1
            synaptic vesicle budding from endosome 4
Path 2
Term Annotations click to browse term
  biological_process 20020
    localization 6478
      establishment of localization 4886
        transport 4734
          vesicle-mediated transport 1674
            vesicle-mediated transport in synapse 280
              synaptic vesicle cycle 252
                synaptic vesicle recycling 87
                  synaptic vesicle recycling via endosome 9
                    clathrin-dependent synaptic vesicle endocytosis 3
                    endocytosed synaptic vesicle processing via endosome 0
                    endocytosed synaptic vesicle to endosome fusion 0
                    regulation of recycling endosome localization within postsynapse 1
                    synaptic vesicle budding from endosome 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.