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ONTOLOGY REPORT - ANNOTATIONS


Term:trimming of terminal mannose on C branch
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Accession:GO:0036510 term browser browse the term
Definition:The removal of an alpha-1,2-linked mannose from the C-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.
Comment:Consider also annotating to 'mannosyl-oligosaccharide 1,2-alpha-mannosidase activity ; GO:0004571'.
Synonyms:exact_synonym: glycoprotein mannose trimming on C branch
 related_synonym: conversion of (Man)9(GlcNAc)2 to (Man)8C(GlcNAc)2;   conversion of M9 to M8C


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trimming of terminal mannose on C branch term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 JBrowse link 3 5,187,707 5,219,963 RGD:2290271
G EDEM2 ER degradation enhancing alpha-mannosidase like protein 2 JBrowse link 20 35,115,364 35,147,336 RGD:2290271
G MAN1B1 mannosidase alpha class 1B member 1 JBrowse link 9 137,086,941 137,109,183 RGD:2290271

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18019
    cellular process 16998
      cellular metabolic process 10894
        cellular macromolecule metabolic process 8437
          glycoprotein metabolic process 415
            protein deglycosylation 31
              protein demannosylation 20
                protein alpha-1,2-demannosylation 20
                  endoplasmic reticulum mannose trimming 16
                    trimming of terminal mannose on C branch 3
Path 2
Term Annotations click to browse term
  biological_process 18019
    metabolic process 11613
      organic substance metabolic process 11030
        organonitrogen compound metabolic process 6869
          protein metabolic process 5903
            cellular protein metabolic process 5322
              cellular protein modification process 4210
                protein deglycosylation 31
                  protein demannosylation 20
                    protein alpha-1,2-demannosylation 20
                      endoplasmic reticulum mannose trimming 16
                        trimming of terminal mannose on C branch 3
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.