Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:intraciliary transport
go back to main search page
Accession:GO:0042073 term browser browse the term
Definition:The bidirectional movement of large protein complexes along microtubules within a cilium, mediated by motor proteins.
Comment:Note that we deem cilium and microtubule-based flagellum to be equivalent.
Synonyms:exact_synonym: intraflagellar transport;   intraflagellar transport involved in cilium organization;   intraflagellar transport involved in microtubule-based flagellum organisation
 related_synonym: IFT
 alt_id: GO:0035734
 xref: Wikipedia:Intraflagellar_transport


show annotations for term's descendants       view all columns           Sort by:
 
intraciliary transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arl3 ADP ribosylation factor like GTPase 3 JBrowse link 1 266,287,015 266,333,099 RGD:1624291
RGD:1600115
G Bbs12 Bardet-Biedl syndrome 12 JBrowse link 2 124,048,513 124,057,026 RGD:1624291
RGD:1600115
G Cep131 centrosomal protein 131 JBrowse link 10 109,243,240 109,267,636 RGD:1624291
G Cilk1 ciliogenesis associated kinase 1 JBrowse link 8 85,413,998 85,473,374 RGD:1624291
RGD:13792537
RGD:1600115
G Hspb11 heat shock protein family B (small), member 11 JBrowse link 5 126,856,128 126,882,913 RGD:1600115
G Ift122 intraflagellar transport 122 JBrowse link 4 147,756,574 147,826,983 RGD:1624291
G Ift140 intraflagellar transport 140 JBrowse link 10 14,373,668 14,461,509 RGD:1624291
RGD:13792537
G Ift172 intraflagellar transport 172 JBrowse link 6 26,390,686 26,485,459 RGD:13792537
G Ift20 intraflagellar transport 20 JBrowse link 10 65,805,808 65,811,353 RGD:1624291
RGD:13792537
G Ift27 intraflagellar transport 27 JBrowse link 7 119,393,384 119,409,710 RGD:1624291
RGD:1600115
G Ift46 intraflagellar transport 46 JBrowse link 8 49,075,978 49,097,689 RGD:13792537
G Ift52 intraflagellar transport 52 JBrowse link 3 159,388,868 159,413,358 RGD:13792537
G Ift57 intraflagellar transport 57 JBrowse link 11 53,664,638 53,731,779 RGD:13792537
G Ift81 intraflagellar transport 81 JBrowse link 12 39,420,161 39,507,412 RGD:13792537
G Ift88 intraflagellar transport 88 JBrowse link 15 37,690,417 37,786,855 RGD:13792537
G Lca5 lebercilin LCA5 JBrowse link 8 90,926,309 90,984,271 RGD:1624291
RGD:1600115
RGD:13792537
G Lca5l lebercilin LCA5 like JBrowse link 11 36,512,823 36,546,806 RGD:13792537
G Mak male germ cell-associated kinase JBrowse link 17 21,531,651 21,567,742 RGD:13792537
G Nme7 NME/NM23 family member 7 JBrowse link 13 82,607,844 82,737,383 RGD:1624291
G Rabl2 RAB, member of RAS oncogene family like 2 JBrowse link 7 130,556,056 130,564,764 RGD:1624291
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 14,271,012 14,331,745 RGD:1624291
G Ssna1 SS nuclear autoantigen 1 JBrowse link 3 2,489,017 2,490,481 RGD:1624291
RGD:1600115
G Traf3ip1 TRAF3 interacting protein 1 JBrowse link 9 98,621,499 98,658,223 RGD:13792537
G Ttc26 tetratricopeptide repeat domain 26 JBrowse link 4 66,090,178 66,147,998 RGD:1624291
RGD:1600115
G Ttc30a1 tetratricopeptide repeat domain 30A1 JBrowse link 3 62,800,932 62,803,373 RGD:13792537
G Ttc30b tetratricopeptide repeat domain 30B JBrowse link 3 62,758,754 62,761,325 RGD:13792537
G Tub TUB bipartite transcription factor JBrowse link 1 173,550,929 173,629,550 RGD:1600115
RGD:1624291
G Wdr34 WD repeat domain 34 JBrowse link 3 8,599,251 8,615,329 RGD:13792537
G Wdr35 WD repeat domain 35 JBrowse link 6 34,094,291 34,152,048 RGD:1624291
intraciliary anterograde transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cilk1 ciliogenesis associated kinase 1 JBrowse link 8 85,413,998 85,473,374 RGD:1600115
RGD:1624291
G Ift122 intraflagellar transport 122 JBrowse link 4 147,756,574 147,826,983 RGD:1624291
RGD:1600115
G Ift52 intraflagellar transport 52 JBrowse link 3 159,388,868 159,413,358 RGD:1624291
RGD:1600115
G Ttc26 tetratricopeptide repeat domain 26 JBrowse link 4 66,090,178 66,147,998 RGD:13792537
intraciliary retrograde transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cilk1 ciliogenesis associated kinase 1 JBrowse link 8 85,413,998 85,473,374 RGD:1600115
RGD:1624291
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 JBrowse link 8 5,217,054 5,436,969 RGD:1624291
RGD:13792537
RGD:1600115
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 JBrowse link 6 7,900,962 7,933,795 RGD:13792537
G Dynll1 dynein light chain LC8-type 1 JBrowse link 12 47,074,200 47,076,573 RGD:1624291
G Ift122 intraflagellar transport 122 JBrowse link 4 147,756,574 147,826,983 RGD:1624291
RGD:13792537
G Ift140 intraflagellar transport 140 JBrowse link 10 14,373,668 14,461,509 RGD:1624291
RGD:13792537
G Ift43 intraflagellar transport 43 JBrowse link 6 109,939,323 110,016,646 RGD:1624291
RGD:1600115
G Ttc21a tetratricopeptide repeat domain 21A JBrowse link 8 128,622,414 128,657,199 RGD:13792537
G Ttc21b tetratricopeptide repeat domain 21B JBrowse link 3 52,286,794 52,361,060 RGD:1624291
RGD:13792537
G Wdr19 WD repeat domain 19 JBrowse link 14 44,705,012 44,767,120 RGD:1624291
RGD:13792537
G Wdr35 WD repeat domain 35 JBrowse link 6 34,094,291 34,152,048 RGD:1624291
RGD:13792537
intraciliary transport involved in cilium assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cep131 centrosomal protein 131 JBrowse link 10 109,243,240 109,267,636 RGD:1624291
RGD:1600115
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 JBrowse link 6 7,900,962 7,933,795 RGD:1624291
RGD:13792537
RGD:1600115
G Ift74 intraflagellar transport 74 JBrowse link 5 113,579,065 113,682,485 RGD:1624291
RGD:13792537
G Ift81 intraflagellar transport 81 JBrowse link 12 39,420,161 39,507,412 RGD:1600115
RGD:1624291
G Pcm1 pericentriolar material 1 JBrowse link 16 54,040,721 54,137,675 RGD:1624291
RGD:13792537
G Ssx2ip SSX family member 2 interacting protein JBrowse link 2 252,263,323 252,296,049 RGD:1624291
RGD:1600115
G Ttc26 tetratricopeptide repeat domain 26 JBrowse link 4 66,090,178 66,147,998 RGD:13792537
regulation of intraciliary retrograde transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tctex1d2 Tctex1 domain containing 2 JBrowse link 11 71,593,302 71,601,662 RGD:1624291
G Ttc21b tetratricopeptide repeat domain 21B JBrowse link 3 52,286,794 52,361,060 RGD:1600115
RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18157
    localization 6056
      macromolecule localization 2968
        protein localization 2627
          protein-containing complex localization 253
            intraciliary transport 40
              intraciliary anterograde transport + 4
              intraciliary retrograde transport + 12
              intraciliary transport involved in cilium assembly 7
Path 2
Term Annotations click to browse term
  biological_process 18157
    localization 6056
      establishment of localization 4652
        transport 4513
          nitrogen compound transport 2183
            amide transport 1865
              peptide transport 1832
                protein transport 1775
                  microtubule-based protein transport 59
                    protein transport along microtubule 59
                      intraciliary transport 40
                        intraciliary anterograde transport + 4
                        intraciliary retrograde transport + 12
                        intraciliary transport involved in cilium assembly 7
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.