Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:strand invasion
go back to main search page
Accession:GO:0042148 term browser browse the term
Definition:The process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.
Synonyms:exact_synonym: Rad51-mediated strand invasion
 related_synonym: D-loop biosynthesis;   D-loop formation;   displacement loop biosynthesis;   displacement loop formation


show annotations for term's descendants       view all columns           Sort by:
 
strand invasion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dmc1 DNA meiotic recombinase 1 JBrowse link 7 120,796,217 120,840,524 RGD:13792537
G Rad51 RAD51 recombinase JBrowse link 3 110,918,240 110,942,920 RGD:13792537
G Rad51d RAD51 paralog D JBrowse link 10 70,222,703 70,241,352 RGD:1624291
RGD:13792537
G Xrcc2 X-ray repair cross complementing 2 JBrowse link 4 5,842,013 5,860,516 RGD:1624291
RGD:13792537
positive regulation of strand invasion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wrn WRN RecQ like helicase JBrowse link 16 62,483,773 62,619,018 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19439
    cellular process 18178
      cellular metabolic process 10639
        cellular macromolecule metabolic process 8177
          DNA metabolic process 885
            strand invasion 5
              meiotic strand invasion + 0
              negative regulation of strand invasion 0
              positive regulation of strand invasion 1
              regulation of strand invasion + 1
              strand invasion involved in gene conversion at mating-type locus 0
Path 2
Term Annotations click to browse term
  biological_process 19439
    cellular process 18178
      cellular metabolic process 10639
        cellular aromatic compound metabolic process 5503
          nucleobase-containing compound metabolic process 5274
            nucleic acid metabolic process 4784
              DNA metabolic process 885
                DNA recombination 307
                  strand invasion 5
                    meiotic strand invasion + 0
                    negative regulation of strand invasion 0
                    positive regulation of strand invasion 1
                    regulation of strand invasion + 1
                    strand invasion involved in gene conversion at mating-type locus 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.