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ONTOLOGY REPORT - ANNOTATIONS


Term:lipoprotein catabolic process
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Accession:GO:0042159 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of any conjugated, water-soluble protein in which the covalently attached nonprotein group consists of a lipid or lipids.
Synonyms:exact_synonym: lipoprotein breakdown;   lipoprotein catabolism;   lipoprotein degradation


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lipoprotein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apob apolipoprotein B JBrowse link 6 33,176,826 33,216,381 RGD:1624291
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
RGD:13792537
G Atm ATM serine/threonine kinase JBrowse link 8 58,015,938 58,119,973 RGD:1624291
G Ctsd cathepsin D JBrowse link 1 215,541,570 215,553,446 RGD:1624291
G Ldlr low density lipoprotein receptor JBrowse link 8 22,750,425 22,773,305 RGD:1600115
RGD:1624291
protein depalmitoleylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Notum NOTUM, palmitoleoyl-protein carboxylesterase JBrowse link 10 109,832,977 109,840,661 RGD:1624291
RGD:13792537
protein depalmitoylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abhd12 abhydrolase domain containing 12 JBrowse link 3 146,630,298 146,690,375 RGD:1624291
G Abhd13 abhydrolase domain containing 13 JBrowse link 16 85,315,275 85,330,108 RGD:1624291
G Abhd17a abhydrolase domain containing 17A JBrowse link 7 11,992,543 12,000,978 RGD:13441201
G Abhd17b abhydrolase domain containing 17B JBrowse link 1 239,266,140 239,301,133 RGD:1624291
G Abhd17c abhydrolase domain containing 17C JBrowse link 1 146,248,505 146,289,465 RGD:1624291
G Lypla1 lysophospholipase 1 JBrowse link 5 14,559,333 14,588,447 RGD:1624291
RGD:13792537
G Lypla2 lysophospholipase 2 JBrowse link 5 154,315,033 154,319,629 RGD:1624291
RGD:13792537
RGD:1600115
G Lyplal1 lysophospholipase-like 1 JBrowse link 13 104,049,263 104,080,680 RGD:1624291
RGD:13792537
G Ppt1 palmitoyl-protein thioesterase 1 JBrowse link 5 140,538,260 140,558,163 RGD:1600115
RGD:13792537
RGD:1624291
RGD:8553248

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19334
    metabolic process 11555
      primary metabolic process 10411
        protein metabolic process 5973
          protein catabolic process 952
            lipoprotein catabolic process 15
              protein depalmitoleylation 1
              protein depalmitoylation 9
Path 2
Term Annotations click to browse term
  biological_process 19334
    metabolic process 11555
      organic substance metabolic process 10949
        macromolecule metabolic process 9418
          macromolecule catabolic process 1290
            protein catabolic process 952
              lipoprotein catabolic process 15
                protein depalmitoleylation 1
                protein depalmitoylation 9
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.