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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of protein catabolic process
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Accession:GO:0042176 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
Synonyms:exact_synonym: regulation of protein breakdown;   regulation of protein catabolism;   regulation of protein degradation


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regulation of protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arntl aryl hydrocarbon receptor nuclear translocator-like ISO
IEA
(MGI:MGI:2669067|PMID:12897057)
GO_REF:0000107
RGD
Ensembl
PMID:12897057 GO_REF:0000107, MGI:MGI:2669067 NCBI chr 1:178,039,002...178,137,469
Ensembl chr 1:178,039,063...178,137,465
JBrowse link
G Cast calpastatin TAS RGD PMID:12832042 RGD:1298731 NCBI chr 2:1,452,111...1,561,669
Ensembl chr 2:1,452,116...1,561,464
JBrowse link
G Cenatac centrosomal AT-AC splicing factor ISO (PMID:31722219) RGD PMID:31722219 NCBI chr 8:48,729,695...48,736,574
Ensembl chr 8:48,729,835...48,736,506
JBrowse link
G Chek2 checkpoint kinase 2 ISO (PMID:17101782) RGD PMID:17101782 NCBI chr12:51,845,574...51,878,098
Ensembl chr12:51,845,796...51,877,624
JBrowse link
G Chmp6 charged multivesicular body protein 6 ISO (PMID:18606141) RGD PMID:18606141 NCBI chr10:109,073,678...109,079,348
Ensembl chr10:109,073,678...109,079,348
JBrowse link
G Faf1 Fas associated factor 1 ISO
ISS
(PMID:15743842)
GO_REF:0000024
RGD
UniProt
PMID:15743842 GO_REF:0000024 NCBI chr 5:129,370,767...129,738,393
Ensembl chr 5:129,448,879...129,738,252
JBrowse link
G Fam83d family with sequence similarity 83, member D ISO (PMID:24344117) RGD PMID:24344117 NCBI chr 3:155,269,344...155,288,612
Ensembl chr 3:155,269,347...155,288,533
JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) ISO (PMID:15899807) RGD PMID:15899807 NCBI chr 1:142,185,092...142,198,167
Ensembl chr 1:142,185,094...142,197,182
JBrowse link
G Mdm2 MDM2 proto-oncogene ISO (PMID:9153395) RGD PMID:9153395 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
G Odc1 ornithine decarboxylase 1 ISO
ISS
(MGI:MGI:5574513|PMID:24967154)
GO_REF:0000024
RGD
UniProt
PMID:24967154 GO_REF:0000024, MGI:MGI:5574513 NCBI chr 6:42,852,529...42,859,142
Ensembl chr 6:42,852,683...42,859,927
JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha IMP PMID:19029245 MGI PMID:19029245 RGD:8553977 NCBI chr10:37,534,449...37,554,861
Ensembl chr10:37,535,871...37,554,664
JBrowse link
G Psmd1 proteasome 26S subunit, non-ATPase 1 IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002, GO_REF:0000104 NCBI chr 9:93,080,618...93,155,033
Ensembl chr 9:93,080,615...93,155,027
JBrowse link
G Psmd2 proteasome 26S subunit, non-ATPase 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:83,934,098...83,944,725
Ensembl chr11:83,934,087...83,944,763
JBrowse link
G Psmd3 proteasome 26S subunit, non-ATPase 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:86,599,007...86,611,180
Ensembl chr10:86,599,220...86,611,188
JBrowse link
G Samd9 sterile alpha motif domain containing 9 ISO (MGI:MGI:5520108|PMID:24029230) RGD PMID:24029230 MGI:MGI:5520108 NCBI chr 4:28,304,967...28,324,637
Ensembl chr 4:28,305,002...28,310,178
JBrowse link
G Serpinb1a serpin family B member 1A ISO UniProtKB:P00772|UniProtKB:P08246|UniProtKB:P08254|UniProtKB:P08311 (MGI:MGI:2389518|PMID:12189154) RGD PMID:12189154 MGI:MGI:2389518 NCBI chr17:32,903,089...32,911,498
Ensembl chr17:32,904,119...32,911,495
JBrowse link
G Snf8 SNF8 subunit of ESCRT-II ISO (PMID:17714434) RGD PMID:17714434 NCBI chr10:83,856,331...83,868,621
Ensembl chr10:83,856,280...83,868,598
JBrowse link
G Tmem9 transmembrane protein 9 IEA
ISO
GO_REF:0000107
UniProtKB:Q61315 (MGI:MGI:6450309|PMID:32380568)
Ensembl
RGD
PMID:32380568 GO_REF:0000107, MGI:MGI:6450309 NCBI chr13:52,854,031...52,871,300
Ensembl chr13:52,854,031...52,871,297
JBrowse link
G Ubxn2a UBX domain protein 2A ISO (MGI:MGI:3848633|PMID:19474315) RGD PMID:19474315 MGI:MGI:3848633 NCBI chr 6:28,969,471...28,997,987
Ensembl chr 6:28,973,025...28,994,519
JBrowse link
G Xpo1 exportin 1 ISO (MGI:MGI:3575842|PMID:15767664) RGD PMID:15767664 MGI:MGI:3575842 NCBI chr14:108,007,421...108,049,088
Ensembl chr14:108,007,724...108,049,660
JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 ISO
ISS
(PMID:18508921)
GO_REF:0000024
RGD
UniProt
PMID:18508921 GO_REF:0000024 NCBI chr16:54,932,546...55,002,322
Ensembl chr16:54,934,056...55,002,322
JBrowse link
negative regulation of cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atraid all-trans retinoic acid-induced differentiation factor ISO (PMID:21723284) RGD PMID:21723284 NCBI chr 6:26,680,628...26,685,185
Ensembl chr 6:26,680,598...26,685,235
JBrowse link
G Cdk2 cyclin dependent kinase 2 ISO (PMID:15750306) RGD PMID:15750306 NCBI chr 7:3,124,953...3,132,533
Ensembl chr 7:3,124,954...3,132,457
JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:16173922)
Ensembl
UniProt
RGD
PMID:16173922 GO_REF:0000024, GO_REF:0000107 NCBI chr10:84,780,644...84,789,800
Ensembl chr10:84,780,608...84,789,832
JBrowse link
G Dab2ip DAB2 interacting protein IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19903888)
Ensembl
UniProt
RGD
PMID:19903888 GO_REF:0000024, GO_REF:0000107 NCBI chr 3:14,889,263...15,060,286
Ensembl chr 3:14,889,510...15,060,286
JBrowse link
G F13b coagulation factor XIII B chain ISO MGI:MGI:5645820 (MGI:MGI:5645809|PMID:18224415) RGD PMID:18224415 MGI:MGI:5645809 NCBI chr13:56,598,891...56,623,132
Ensembl chr13:56,598,957...56,623,124
JBrowse link
G Nell1 neural EGFL like 1 ISO
ISS
(PMID:21723284)
GO_REF:0000024
RGD
UniProt
PMID:21723284 GO_REF:0000024 NCBI chr 1:105,348,577...106,218,970
Ensembl chr 1:105,349,069...106,218,958
JBrowse link
G Rgp1 RGP1 homolog, RAB6A GEF complex partner 1 ISO (PMID:23091056) RGD PMID:23091056 NCBI chr 5:59,080,290...59,088,777
Ensembl chr 5:59,080,765...59,088,523
JBrowse link
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 ISO (PMID:23091056) RGD PMID:23091056 NCBI chr 1:247,688,778...247,784,219
Ensembl chr 1:247,688,789...247,781,875
JBrowse link
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsa cathepsin A ISO
NAS
ISS
(MGI:MGI:5700310|PMID:12505983)
GO_REF:0000024
UniProtKB:P10619 (PMID:12505983)
RGD
ParkinsonsUK-UCL
PMID:12505983, PMID:12505983 GO_REF:0000024, MGI:MGI:5700310, RGD:10412300 NCBI chr 3:161,298,750...161,304,627
Ensembl chr 3:161,298,962...161,304,625
JBrowse link
G Snca synuclein alpha ISO (PMID:20697033) RGD PMID:20697033 NCBI chr 4:90,782,412...90,883,236
Ensembl chr 4:90,782,374...90,882,285
JBrowse link
negative regulation of elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C ISO (PMID:10545518) RGD PMID:10545518 NCBI chr 3:143,219,671...143,223,544
Ensembl chr 3:143,219,686...143,223,615
JBrowse link
negative regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sgta small glutamine rich tetratricopeptide repeat containing alpha ISO
ISS
(PMID:23129660)
GO_REF:0000024
RGD
UniProt
PMID:23129660 GO_REF:0000024 NCBI chr 7:11,521,949...11,538,691
Ensembl chr 7:11,521,998...11,539,319
JBrowse link
G Svip small VCP interacting protein IC
IBA
ISO
PMID:17000876
PMID:21873635
(PMID:17872946)
RGD PMID:17872946, PMID:17000876, PMID:21873635 RGD:10047192, RGD:13792537 NCBI chr 1:107,368,117...107,373,807
Ensembl chr 1:107,368,117...107,373,807
JBrowse link
G Usp14 ubiquitin specific peptidase 14 ISO (PMID:19135427) RGD PMID:19135427 NCBI chr18:1,178,785...1,216,573
Ensembl chr18:1,178,787...1,216,409
JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 ISS
ISO
GO_REF:0000024
(MGI:MGI:3813160|PMID:18606867)
UniProt
RGD
PMID:18606867 GO_REF:0000024, MGI:MGI:3813160 NCBI chr 1:162,703,394...162,713,560
Ensembl chr 1:162,703,442...162,713,610
JBrowse link
G Ubxn1 UBX domain protein 1 ISO (PMID:21135095) RGD PMID:21135095 NCBI chr 1:225,067,953...225,071,944
Ensembl chr 1:225,068,009...225,071,945
JBrowse link
G Usp25 ubiquitin specific peptidase 25 ISO (PMID:22590560) RGD PMID:22590560 NCBI chr11:15,436,080...15,558,646
Ensembl chr11:15,436,269...15,558,646
JBrowse link
negative regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:22848640)
(MGI:MGI:5446858|PMID:22848640)
RGD PMID:22848640 MGI:MGI:5446858 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) ISO
IEA
(PMID:16912035)
GO_REF:0000107
RGD
Ensembl
PMID:16912035 GO_REF:0000107 NCBI chr 1:142,185,092...142,198,167
Ensembl chr 1:142,185,094...142,197,182
JBrowse link
negative regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm4b lysosomal protein transmembrane 4 beta ISO
ISS
(PMID:25588945)
GO_REF:0000024
RGD
UniProt
PMID:25588945 GO_REF:0000024 NCBI chr 7:72,924,911...72,968,099
Ensembl chr 7:72,924,799...72,968,101
JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase ISO
ISS
MGI:MGI:1857830 (MGI:MGI:5751042|PMID:25592972), (MGI:MGI:5816436|PMID:26467158)
GO_REF:0000024
RGD
UniProt
PMID:25592972, PMID:26467158 GO_REF:0000024, MGI:MGI:5751042, MGI:MGI:5816436 NCBI chr 7:121,394,541...121,436,935
Ensembl chr 7:121,408,829...121,435,022
JBrowse link
G Vps35 VPS35 retromer complex component ISO (MGI:MGI:5694519|PMID:26203154) RGD PMID:26203154 MGI:MGI:5694519 NCBI chr19:27,464,937...27,500,636
Ensembl chr19:27,464,937...27,500,636
JBrowse link
negative regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 ISO
ISS
(PMID:18383040)
GO_REF:0000024
RGD
UniProt
PMID:18383040 GO_REF:0000024 NCBI chr13:47,738,933...47,743,392
Ensembl chr13:47,739,526...47,743,392
JBrowse link
G Lrig2 leucine-rich repeats and immunoglobulin-like domains 2 ISO (MGI:MGI:5702499|PMID:26651291) RGD PMID:26651291 MGI:MGI:5702499 NCBI chr 2:206,928,708...206,997,915
Ensembl chr 2:206,931,204...206,997,519
JBrowse link
G Ptpn3 protein tyrosine phosphatase, non-receptor type 3 ISO (PMID:12207026) RGD PMID:12207026 NCBI chr 5:74,248,996...74,368,167
Ensembl chr 5:74,248,996...74,368,186
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 ISO
IBA
(PMID:12714508)
PMID:21873635
RGD PMID:12714508, PMID:21873635 RGD:13792537 NCBI chr  X:1,364,771...1,369,451
Ensembl chr  X:1,364,786...1,369,384
JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:107,338,465...107,386,072
Ensembl chr10:107,338,465...107,386,072
JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 ISO
IBA
IEA
(PMID:18383040)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:18383040, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 7:23,543,125...23,594,170
Ensembl chr 7:23,544,215...23,594,133
JBrowse link
G Timp4 TIMP metallopeptidase inhibitor 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:147,156,948...147,163,467
Ensembl chr 4:147,156,948...147,163,467
JBrowse link
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase ISO (PMID:8175643) RGD PMID:8175643 NCBI chr 5:78,368,867...78,379,206
Ensembl chr 5:78,368,867...78,379,346
JBrowse link
G F8a1 coagulation factor VIII-associated 1 ISO
ISS
(PMID:27815841)
GO_REF:0000024
RGD
UniProt
PMID:27815841 GO_REF:0000024 NCBI chr 1:147,021,436...147,022,950
Ensembl chr 1:147,021,436...147,022,950
JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 ISO (PMID:21669198) RGD PMID:21669198 NCBI chr19:44,164,935...44,175,771
Ensembl chr19:44,164,935...44,175,770
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 IMP
ISO
PMID:17517623
(MGI:MGI:6148636|PMID:17517623)
RGD PMID:17517623, PMID:17517623 MGI:MGI:6148636, RGD:13514081 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 ISO (PMID:25681212) RGD PMID:25681212 NCBI chr11:84,930,965...85,000,694
Ensembl chr11:84,972,132...85,000,681
JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 ISO
ISS
(PMID:29295817)
GO_REF:0000024
RGD
UniProt
PMID:29295817 GO_REF:0000024 NCBI chr 3:46,284,961...46,325,230
Ensembl chr 3:46,286,712...46,324,057
JBrowse link
G Ophn1 oligophrenin 1 ISO
IBA
(MGI:MGI:5303043|PMID:21874017)
PMID:21873635
RGD PMID:21874017, PMID:21873635 MGI:MGI:5303043, RGD:13792537 NCBI chr  X:68,185,865...68,579,518
Ensembl chr  X:68,189,161...68,563,137
JBrowse link
G Prkcg protein kinase C, gamma ISO
ISS
(MGI:MGI:5467682|PMID:23185022)
GO_REF:0000024
RGD
UniProt
PMID:23185022 GO_REF:0000024, MGI:MGI:5467682 NCBI chr 1:64,407,098...64,433,698
Ensembl chr 1:64,407,114...64,433,636
JBrowse link
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 ISO (PMID:29934401) RGD PMID:29934401 NCBI chr19:10,827,057...10,856,747
Ensembl chr19:10,827,371...10,856,745
JBrowse link
G Psmf1 proteasome inhibitor subunit 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:10764772)
Ensembl
UniProt
RGD
PMID:10764772 GO_REF:0000024, GO_REF:0000107 NCBI chr 3:147,238,111...147,263,275
Ensembl chr 3:147,238,114...147,263,275
JBrowse link
G Sco1 synthesis of cytochrome C oxidase 1 ISO MGI:MGI:2176228|MGI:MGI:5758867 (MGI:MGI:5643882|PMID:25683716) RGD PMID:25683716 MGI:MGI:5643882 NCBI chr10:53,595,854...53,608,437
Ensembl chr10:53,595,854...53,608,435
JBrowse link
G Usp19 ubiquitin specific peptidase 19 ISO
IEA
(MGI:MGI:5614537|PMID:25088257)
GO_REF:0000107
RGD
Ensembl
PMID:25088257 GO_REF:0000107, MGI:MGI:5614537 NCBI chr 8:117,280,690...117,291,729
Ensembl chr 8:117,280,705...117,291,351
JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BAG cochaperone 5 ISO (PMID:24475098) RGD PMID:24475098 NCBI chr 6:136,180,640...136,185,651
Ensembl chr 6:136,182,006...136,185,651
JBrowse link
G Bag6 BAG cochaperone 6 ISO
ISS
(MGI:MGI:3808636|PMID:18678708)
GO_REF:0000024
RGD
UniProt
PMID:18678708 GO_REF:0000024, MGI:MGI:3808636 NCBI chr20:5,124,512...5,138,084
Ensembl chr20:5,125,349...5,138,084
JBrowse link
G Camlg calcium modulating ligand ISO UniProtKB:Q9H9V4 (PMID:20553626) RGD PMID:20553626 NCBI chr17:9,523,792...9,534,683
Ensembl chr17:9,523,795...9,534,653
JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 ISO (PMID:23398316) RGD PMID:23398316 NCBI chr15:51,818,887...51,834,443
Ensembl chr15:51,818,897...51,834,030
JBrowse link
G Clec16a C-type lectin domain containing 16A ISO MGI:MGI:5648633 (MGI:MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:MGI:5603233 NCBI chr10:5,002,196...5,196,914
Ensembl chr10:5,009,826...5,196,892
JBrowse link
G Ddrgk1 DDRGK domain containing 1 ISO (PMID:28263186) RGD PMID:28263186 NCBI chr 3:123,195,580...123,206,828
Ensembl chr 3:123,195,580...123,206,828
JBrowse link
G Eif3h eukaryotic translation initiation factor 3, subunit H ISO (PMID:32269044) RGD PMID:32269044 NCBI chr 6:10,151,732...10,236,677 JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase ISO
IBA
ISS
(PMID:15313915)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:15313915, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:15,697,292...16,862,873 JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 ISO (MGI:MGI:3807767|PMID:11546783) RGD PMID:11546783 MGI:MGI:3807767 NCBI chr19:24,786,604...24,798,231
Ensembl chr19:24,786,628...24,798,233
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISS
ISO
GO_REF:0000024
(PMID:16280321), (PMID:24613385)
UniProt
RGD
PMID:16280321, PMID:24613385 GO_REF:0000024 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Klhl40 kelch-like family member 40 ISO
IBA
(MGI:MGI:5586592|PMID:24960163)
PMID:21873635
RGD PMID:24960163, PMID:21873635 MGI:MGI:5586592, RGD:13792537 NCBI chr 8:130,416,265...130,421,871
Ensembl chr 8:130,416,355...130,421,871
JBrowse link
G Map1a microtubule-associated protein 1A ISO (MGI:MGI:5703671|PMID:26609151) RGD PMID:26609151 MGI:MGI:5703671 NCBI chr 3:113,251,918...113,272,193
Ensembl chr 3:113,251,778...113,272,186
JBrowse link
G Mtm1 myotubularin 1 ISO MGI:MGI:2450997 (MGI:MGI:5510937|PMID:23695157) RGD PMID:23695157 MGI:MGI:5510937 NCBI chr 6:18,821,821...18,840,449
Ensembl chr 6:18,821,815...18,839,409
JBrowse link
G N4bp1 Nedd4 binding protein 1 ISO
IBA
(MGI:MGI:3829128|PMID:17592138)
PMID:21873635
RGD PMID:17592138, PMID:21873635 MGI:MGI:3829128, RGD:13792537 NCBI chr19:21,218,123...21,268,539
Ensembl chr19:21,218,465...21,266,964
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor ISO (PMID:22522597) RGD PMID:22522597 NCBI chr 1:77,836,522...77,843,991
Ensembl chr 1:77,836,196...77,844,189
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase IEA
ISO
GO_REF:0000107
(PMID:26678539)
Ensembl
RGD
PMID:26678539 GO_REF:0000107 NCBI chr  X:71,540,870...71,585,906
Ensembl chr  X:71,528,988...71,585,908
JBrowse link
G Park7 Parkinsonism associated deglycase ISO
IEA
(PMID:17015834)
GO_REF:0000107
RGD
Ensembl
PMID:17015834 GO_REF:0000107 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724
JBrowse link
G Pbk PDZ binding kinase ISO MGI:MGI:5293435 (MGI:MGI:5293269|PMID:21715333) RGD PMID:21715333 MGI:MGI:5293269 NCBI chr15:42,489,253...42,500,377
Ensembl chr15:42,489,377...42,500,395
JBrowse link
G Rpl11 ribosomal protein L11 ISO
ISS
(MGI:MGI:5897550|PMID:21804542)
GO_REF:0000024
RGD
UniProt
PMID:21804542 GO_REF:0000024, MGI:MGI:5897550 NCBI chr 5:154,390,809...154,394,412
Ensembl chr 5:154,388,140...154,394,328
JBrowse link
G Rybp RING1 and YY1 binding protein ISO (PMID:27060496) RGD PMID:27060496 NCBI chr 4:132,689,623...132,740,823
Ensembl chr 4:132,689,531...132,740,938
JBrowse link
G Sdcbp syndecan binding protein ISO
ISS
(PMID:25893292)
GO_REF:0000024
RGD
UniProt
PMID:25893292 GO_REF:0000024 NCBI chr 5:19,471,664...19,498,499
Ensembl chr 5:19,471,664...19,498,485
JBrowse link
G Senp1 SUMO specific peptidase 1 ISO MGI:MGI:3818522 (MGI:MGI:3818351|PMID:17981124) RGD PMID:17981124 MGI:MGI:3818351 NCBI chr 7:139,626,444...139,684,587
Ensembl chr 7:139,630,515...139,675,245
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
IEA
(MGI:MGI:3624046|PMID:16611981)
GO_REF:0000107
RGD
Ensembl
PMID:16611981 GO_REF:0000107, MGI:MGI:3624046 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 ISO (MGI:MGI:5310666|PMID:22285184) RGD PMID:22285184 MGI:MGI:5310666 NCBI chr 8:118,206,678...118,326,264
Ensembl chr 8:118,206,698...118,325,537
JBrowse link
G Taf9 TATA-box binding protein associated factor 9 ISO (PMID:11278372) RGD PMID:11278372 NCBI chr 2:30,664,407...30,668,414
Ensembl chr 2:30,664,639...30,668,414
JBrowse link
G Tlk2 tousled-like kinase 2 ISO (PMID:20016786) RGD PMID:20016786 NCBI chr10:93,410,181...93,507,277
Ensembl chr10:93,415,399...93,507,277
JBrowse link
G Trim39 tripartite motif-containing 39 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:23213251)
UniProt
RGD
PMID:23213251, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:2,500,691...2,514,546
Ensembl chr20:2,500,689...2,514,546
JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 ISO MGI:MGI:5588394 (MGI:MGI:6362140|PMID:31537781) RGD PMID:31537781 MGI:MGI:6362140 NCBI chr 8:49,106,374...49,109,981
Ensembl chr 8:49,106,374...49,109,981
JBrowse link
G Ubxn1 UBX domain protein 1 ISO
ISS
(PMID:20351172)
GO_REF:0000024
RGD
UniProt
PMID:20351172 GO_REF:0000024 NCBI chr 1:225,067,953...225,071,944
Ensembl chr 1:225,068,009...225,071,945
JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 ISO (PMID:23770237) RGD PMID:23770237 NCBI chr13:60,568,102...60,603,812
Ensembl chr13:60,545,635...60,603,811
JBrowse link
G Usp7 ubiquitin specific peptidase 7 IEA
ISO
GO_REF:0000107
(PMID:26678539)
Ensembl
RGD
PMID:26678539 GO_REF:0000107 NCBI chr10:6,930,462...7,019,910
Ensembl chr10:6,975,244...7,018,930
JBrowse link
G Wac WW domain containing adaptor with coiled-coil ISO (PMID:22354037) RGD PMID:22354037 NCBI chr17:60,887,606...60,946,630
Ensembl chr17:60,888,017...60,946,426
JBrowse link
negative regulation of protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 ISO (MGI:MGI:5643972|PMID:25751059) RGD PMID:25751059 MGI:MGI:5643972 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 ISO (PMID:18374643) RGD PMID:18374643 NCBI chr 7:70,360,199...70,377,422
Ensembl chr 7:70,364,813...70,377,422
JBrowse link
G Azin1 antizyme inhibitor 1 IDA
IBA
ISS
ISO
IEA
downregulates antizyme degradation of ODC
PMID:21873635
GO_REF:0000024
(PMID:17900240)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17900240, PMID:8631929, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:633334, RGD:13792537 NCBI chr 7:77,345,646...77,372,398
Ensembl chr 7:77,345,646...77,372,398
JBrowse link
G Azin2 antizyme inhibitor 2 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:17900240)
Ensembl
UniProt
RGD
PMID:17900240, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 5:147,120,128...147,148,576
Ensembl chr 5:147,120,129...147,148,291
JBrowse link
G Banp Btg3 associated nuclear protein ISO
IBA
(MGI:MGI:3579758|PMID:15701641)
PMID:21873635
RGD PMID:15701641, PMID:21873635 MGI:MGI:3579758, RGD:13792537 NCBI chr19:54,766,441...54,843,795
Ensembl chr19:54,766,589...54,840,569
JBrowse link
G Cyp51 cytochrome P450, family 51 ISO (MGI:MGI:6270905|PMID:20876579) RGD PMID:20876579 MGI:MGI:6270905 NCBI chr 4:27,175,564...27,194,018
Ensembl chr 4:27,175,243...27,194,018
JBrowse link
G Dedd death effector domain-containing ISO MGI:MGI:3707325 (MGI:MGI:5000188|PMID:21135503) RGD PMID:21135503 MGI:MGI:5000188 NCBI chr13:89,706,932...89,721,825
Ensembl chr13:89,718,066...89,721,454
JBrowse link
G Dysf dysferlin ISO (MGI:MGI:5433472|PMID:20724702) RGD PMID:20724702 MGI:MGI:5433472 NCBI chr 4:115,700,942...115,901,873
Ensembl chr 4:115,712,850...115,901,873
JBrowse link
G Egfr epidermal growth factor receptor ISO (PMID:17115032) RGD PMID:17115032 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Fbxo43 F-box protein 43 ISO (MGI:MGI:3663227|PMID:16966421) RGD PMID:16966421 MGI:MGI:3663227 NCBI chr 7:74,925,091...74,938,796
Ensembl chr 7:74,925,092...74,938,663
JBrowse link
G Flna filamin A ISO (PMID:18322202) RGD PMID:18322202 NCBI chr  X:156,460,785...156,487,245
Ensembl chr  X:156,463,953...156,487,245
JBrowse link
G Fmn2 formin 2 ISO (PMID:23375502) RGD PMID:23375502 NCBI chr13:92,569,256...92,887,302 JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase ISO (MGI:MGI:3775717|PMID:16841086) RGD PMID:16841086 MGI:MGI:3775717 NCBI chr20:44,436,354...44,630,316
Ensembl chr20:44,436,403...44,630,317
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO
IEA
MGI:MGI:95822 (MGI:MGI:3054180|PMID:15317856)
GO_REF:0000107
RGD
Ensembl
PMID:15317856 GO_REF:0000107, MGI:MGI:3054180 NCBI chr10:5,707,806...6,123,568
Ensembl chr10:5,930,298...6,119,990
JBrowse link
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C ISO
IEA
MGI:MGI:95820 (MGI:MGI:3054180|PMID:15317856)
GO_REF:0000107
RGD
Ensembl
PMID:15317856 GO_REF:0000107, MGI:MGI:3054180 NCBI chr10:103,798,290...103,816,923
Ensembl chr10:103,798,291...103,816,287
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase ISO (MGI:MGI:6270905|PMID:20876579) RGD PMID:20876579 MGI:MGI:6270905 NCBI chr 2:27,480,224...27,500,654
Ensembl chr 2:27,480,226...27,500,654
JBrowse link
G Ins2 insulin 2 ISO (PMID:15185208) RGD PMID:15185208 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034
JBrowse link
G Irak3 interleukin-1 receptor-associated kinase 3 ISO (MGI:MGI:3843426|PMID:17379480)
(PMID:17379480), (PMID:18156187)
RGD PMID:17379480, PMID:18156187 MGI:MGI:3843426 NCBI chr 7:64,922,830...64,982,224
Ensembl chr 7:64,923,615...64,982,281
JBrowse link
G Mad2l1 mitotic arrest deficient 2 like 1 ISO (PMID:11459825) RGD PMID:11459825 NCBI chr 4:97,530,993...97,543,179
Ensembl chr 4:97,531,083...97,537,086
JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 ISO
ISS
(PMID:11459826)
GO_REF:0000024
RGD
UniProt
PMID:11459826 GO_REF:0000024 NCBI chr 5:164,943,183...164,956,255
Ensembl chr 5:164,950,917...164,956,255
JBrowse link
G Mdm4 MDM4 regulator of p53 ISO (PMID:10608892) RGD PMID:10608892 NCBI chr13:49,786,776...49,828,780
Ensembl chr13:49,792,794...49,828,720
JBrowse link
G Mycbp2 MYC binding protein 2 ISO (MGI:MGI:3849342|PMID:19398581) RGD PMID:19398581 MGI:MGI:3849342 NCBI chr15:87,405,472...87,450,812
NCBI chr15:93,678,062...93,901,556
Ensembl chr15:87,506,959...93,868,301
JBrowse link
G Nos2 nitric oxide synthase 2 ISO
IEA
(MGI:MGI:4943392|PMID:18003616)
GO_REF:0000107
RGD
Ensembl
PMID:18003616 GO_REF:0000107, MGI:MGI:4943392 NCBI chr10:66,188,290...66,221,621
Ensembl chr10:66,189,786...66,313,190
JBrowse link
G Nrg1 neuregulin 1 ISO
IEA
(MGI:MGI:4454957|PMID:20448149)
GO_REF:0000107
RGD
Ensembl
PMID:20448149 GO_REF:0000107, MGI:MGI:4454957 NCBI chr16:62,969,573...64,065,063
Ensembl chr16:63,837,216...64,057,434
JBrowse link
G Park7 Parkinsonism associated deglycase ISO (MGI:MGI:5575789|PMID:24899725) RGD PMID:24899725 MGI:MGI:5575789 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724
JBrowse link
G Phb prohibitin ISO (PMID:24732013) RGD PMID:24732013 NCBI chr10:83,476,107...83,488,878
Ensembl chr10:83,476,107...83,488,878
JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ISO (PMID:11533658) RGD PMID:11533658 NCBI chr 8:21,669,236...21,680,615
Ensembl chr 8:21,669,236...21,680,615
JBrowse link
G Prkcg protein kinase C, gamma ISO (PMID:15808853) RGD PMID:15808853 NCBI chr 1:64,407,098...64,433,698
Ensembl chr 1:64,407,114...64,433,636
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO (MGI:MGI:3581324|PMID:15923614) RGD PMID:15923614 MGI:MGI:3581324 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249
JBrowse link
G Rilp Rab interacting lysosomal protein ISO (PMID:17010938) RGD PMID:17010938 NCBI chr10:63,658,451...63,662,428
Ensembl chr10:63,659,085...63,662,050
JBrowse link
G Serpine2 serpin family E member 2 IEA
ISO
GO_REF:0000107
MGI:MGI:2387774 (MGI:MGI:3521551|PMID:15509762), (MGI:MGI:3654805|PMID:16319172)
Ensembl
RGD
PMID:15509762, PMID:16319172 GO_REF:0000107, MGI:MGI:3521551, MGI:MGI:3654805 NCBI chr 9:85,560,852...85,629,410
Ensembl chr 9:85,560,863...85,626,094
JBrowse link
G Sf3b3 splicing factor 3b, subunit 3 ISO (PMID:23951410) RGD PMID:23951410 NCBI chr19:43,392,071...43,429,582
Ensembl chr19:43,392,085...43,429,580
JBrowse link
G Shh sonic hedgehog signaling molecule ISO MGI:MGI:1857796 (MGI:MGI:3624046|PMID:16611981) RGD PMID:16611981 MGI:MGI:3624046 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Sirt2 sirtuin 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:20543840)
Ensembl
UniProt
RGD
PMID:20543840 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link
G Smad3 SMAD family member 3 IMP
IDA
PMID:20097766
PMID:16690606
BHF-UCL
CACAO
PMID:20097766, PMID:16690606 RGD:11079190, RGD:15023472 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Smad4 SMAD family member 4 IMP PMID:20097766 BHF-UCL PMID:20097766 RGD:11079190 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
G Snx12 sorting nexin 12 ISO (PMID:22719997) RGD PMID:22719997 NCBI chr  X:70,989,822...71,127,330
Ensembl chr  X:70,989,822...71,127,278
JBrowse link
G Snx3 sorting nexin 3 ISO (PMID:18767904) RGD PMID:18767904 NCBI chr20:47,225,382...47,263,390
Ensembl chr20:47,225,619...47,263,390
JBrowse link
G Trim40 tripartite motif-containing 40 ISO (PMID:21474709) RGD PMID:21474709 NCBI chr20:2,169,674...2,178,477
Ensembl chr20:2,169,545...2,178,601
JBrowse link
negative regulation of proteolysis involved in cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO (MGI:MGI:5468878|PMID:23277542)
UniProtKB:Q9BXM7 (PMID:25217637)
RGD PMID:23277542, PMID:25217637 MGI:MGI:5468878 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
G Efna1 ephrin A1 ISO UniProtKB:P54764 (PMID:24217950) RGD PMID:24217950 NCBI chr 2:188,588,808...188,596,156
Ensembl chr 2:188,588,796...188,596,222
JBrowse link
G Epha4 Eph receptor A4 ISO UniProtKB:P20827 (PMID:24217950) RGD PMID:24217950 NCBI chr 9:83,111,222...83,253,486
Ensembl chr 9:83,111,222...83,253,458
JBrowse link
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Styx serine/threonine/tyrosine interacting protein ISO
IBA
(PMID:28007894)
PMID:21873635
RGD PMID:28007894, PMID:21873635 RGD:13792537 NCBI chr15:19,690,079...19,720,683
Ensembl chr15:19,690,194...19,717,774
JBrowse link
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A ISO (MGI:MGI:4461099|PMID:20100865) RGD PMID:20100865 MGI:MGI:4461099 NCBI chr20:7,484,550...7,636,498
Ensembl chr20:7,484,550...7,636,497
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO (MGI:MGI:5468878|PMID:23277542)
(PMID:16173922), (PMID:18560357)
RGD PMID:16173922, PMID:18560357, PMID:23277542 MGI:MGI:5468878 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 ISO UniProtKB:P19784|UniProtKB:P25686|UniProtKB:P67870 (PMID:28031292) RGD PMID:28031292 NCBI chr 3:147,713,808...147,760,375
Ensembl chr 3:147,713,821...147,757,862
JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 ISO UniProtKB:P25686|UniProtKB:P67870|UniProtKB:P68400 (PMID:28031292) RGD PMID:28031292 NCBI chr19:9,972,537...10,012,043
Ensembl chr19:9,972,537...10,012,043
JBrowse link
G Hfe homeostatic iron regulator ISO (PMID:24904118) RGD PMID:24904118 NCBI chr17:43,661,276...43,669,327
Ensembl chr17:43,661,222...43,669,985
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (PMID:21628596) RGD PMID:21628596 NCBI chr 4:66,438,390...66,625,183
Ensembl chr 4:66,445,266...66,624,912
JBrowse link
G Pdcl3 phosducin-like 3 ISO (PMID:23792958) RGD PMID:23792958 NCBI chr 9:45,672,257...45,680,728
Ensembl chr 9:45,672,157...45,680,799
JBrowse link
G Pml PML nuclear body scaffold ISO (PMID:15195100) RGD PMID:15195100 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Psen1 presenilin 1 ISO (MGI:MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:MGI:4887523 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Psen2 presenilin 2 ISO (MGI:MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:MGI:4887523 NCBI chr13:98,513,600...98,539,347
Ensembl chr13:98,513,570...98,530,724
JBrowse link
G Qrich2 glutamine rich 2 ISO (PMID:30683861)
(MGI:MGI:6277293|PMID:30683861)
RGD PMID:30683861 MGI:MGI:6277293 NCBI chr10:105,397,470...105,422,811
Ensembl chr10:105,399,814...105,412,627
JBrowse link
G Rpl11 ribosomal protein L11 ISO (PMID:18560357) RGD PMID:18560357 NCBI chr 5:154,390,809...154,394,412
Ensembl chr 5:154,388,140...154,394,328
JBrowse link
G Rpl23 ribosomal protein L23 ISO (PMID:15314173) RGD PMID:15314173 NCBI chr10:85,721,398...85,725,359
Ensembl chr10:85,721,394...85,725,429
JBrowse link
G Rpl5 ribosomal protein L5 ISO (PMID:18560357) RGD PMID:18560357 NCBI chr14:2,860,963...2,867,397
Ensembl chr14:2,860,965...2,867,397
JBrowse link
G Rps7 ribosomal protein S7 ISO (PMID:17310983) RGD PMID:17310983 NCBI chr 6:47,899,525...47,904,389
Ensembl chr 6:47,899,525...47,904,437
JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat containing alpha ISO
ISS
(PMID:23129660)
GO_REF:0000024
RGD
UniProt
PMID:23129660 GO_REF:0000024 NCBI chr 7:11,521,949...11,538,691
Ensembl chr 7:11,521,998...11,539,319
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling ISO MGI:MGI:1343085 (MGI:MGI:4355593|PMID:19684112) RGD PMID:19684112 MGI:MGI:4355593 NCBI chr 1:266,143,766...266,241,742
Ensembl chr 1:266,143,818...266,239,016
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO (PMID:17237821) RGD PMID:17237821 NCBI chr  X:71,412,291...71,486,456
Ensembl chr  X:71,412,289...71,485,085
JBrowse link
G Trim39 tripartite motif-containing 39 ISO (PMID:19100260) RGD PMID:19100260 NCBI chr20:2,500,691...2,514,546
Ensembl chr20:2,500,689...2,514,546
JBrowse link
G Wnt1 Wnt family member 1 ISO (MGI:MGI:3628833|PMID:16601693) RGD PMID:16601693 MGI:MGI:3628833 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
JBrowse link
positive regulation of anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc20 cell division cycle 20 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:137,260,728...137,264,931
Ensembl chr 5:137,260,739...137,265,015
JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,201,690...11,213,614
Ensembl chr 7:11,201,690...11,213,613
JBrowse link
positive regulation of cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amer1 APC membrane recruitment protein 1 ISO (PMID:17510365) RGD PMID:17510365 NCBI chr  X:64,686,620...64,702,504
Ensembl chr  X:64,686,623...64,702,441
JBrowse link
G Dact1 dishevelled-binding antagonist of beta-catenin 1 ISO (PMID:16446366), (PMID:18936100) RGD PMID:16446366, PMID:18936100 NCBI chr 6:93,740,440...93,751,003
Ensembl chr 6:93,740,586...93,749,809
JBrowse link
G Ezr ezrin ISO UniProtKB:P26038|UniProtKB:P35241 (PMID:21148287) RGD PMID:21148287 NCBI chr 1:47,287,872...47,331,412
Ensembl chr 1:47,287,874...47,331,412
JBrowse link
G Faf1 Fas associated factor 1 IEA
ISO
GO_REF:0000107
(PMID:26842564)
Ensembl
RGD
PMID:26842564 GO_REF:0000107 NCBI chr 5:129,370,767...129,738,393
Ensembl chr 5:129,448,879...129,738,252
JBrowse link
G Fbxl5 F-box and leucine-rich repeat protein 5 ISO MGI:MGI:5295289 (MGI:MGI:5292406|PMID:21907140) RGD PMID:21907140 MGI:MGI:5292406 NCBI chr14:71,852,649...71,891,143
Ensembl chr14:71,852,682...71,891,143
JBrowse link
G Hamp hepcidin antimicrobial peptide ISO (MGI:MGI:5293184|PMID:21700773) RGD PMID:21700773 MGI:MGI:5293184 NCBI chr 1:89,368,021...89,369,960
Ensembl chr 1:89,368,021...89,369,960
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO UniProtKB:Q9UNE7 (PMID:18292230) RGD PMID:18292230 NCBI chr 6:135,107,262...135,112,793
Ensembl chr 6:135,107,271...135,112,775
JBrowse link
G Msn moesin IEA
ISO
GO_REF:0000107
UniProtKB:P15311|UniProtKB:P35241 (PMID:21148287)
Ensembl
RGD
PMID:21148287 GO_REF:0000107 NCBI chr  X:65,226,834...65,294,192
Ensembl chr  X:65,226,748...65,295,810
JBrowse link
G Pttg1ip PTTG1 interacting protein ISO (PMID:24506068) RGD PMID:24506068 NCBI chr20:11,746,369...11,764,097
Ensembl chr20:11,746,370...11,764,233
JBrowse link
G Rdx radixin ISO UniProtKB:P15311|UniProtKB:P26038 (PMID:21148287) RGD PMID:21148287 NCBI chr 8:56,570,728...56,612,851
Ensembl chr 8:56,585,396...56,610,612
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 ISO (MGI:MGI:3839729|PMID:18952128) RGD PMID:18952128 MGI:MGI:3839729 NCBI chr 1:14,401,103...14,416,369
Ensembl chr 1:14,402,913...14,412,807
JBrowse link
G Uqcc2 ubiquinol-cytochrome c reductase complex assembly factor 2 ISO
ISS
(PMID:24385928)
GO_REF:0000024
RGD
UniProt
PMID:24385928 GO_REF:0000024 NCBI chr20:5,712,200...5,723,902
Ensembl chr20:5,712,203...5,723,902
JBrowse link
G Vgll4 vestigial-like family member 4 ISO (MGI:MGI:6120600|PMID:27720608) RGD PMID:27720608 MGI:MGI:6120600 NCBI chr 4:146,778,556...146,890,063
Ensembl chr 4:146,779,276...146,839,397
JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes ISO (PMID:21148287) RGD PMID:21148287 NCBI chr 8:48,677,492...48,692,295
Ensembl chr 8:48,677,492...48,692,295
JBrowse link
G Vps35 VPS35 retromer complex component ISO UniProtKB:P37840 (PMID:25533483) RGD PMID:25533483 NCBI chr19:27,464,937...27,500,636
Ensembl chr19:27,464,937...27,500,636
JBrowse link
positive regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo-like kinase 3 ISO (PMID:27344333) RGD PMID:27344333 NCBI chr 5:135,997,725...136,002,900
Ensembl chr 5:135,997,725...136,002,900
JBrowse link
positive regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcap31 B-cell receptor-associated protein 31 ISO UniProtKB:Q9BUN8 (PMID:18555783) RGD PMID:18555783 NCBI chr  X:157,094,365...157,126,397
Ensembl chr  X:157,095,937...157,126,393
JBrowse link
G Cav1 caveolin 1 IEA
ISO
GO_REF:0000107
(PMID:24089527)
Ensembl
RGD
PMID:24089527 GO_REF:0000107 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 ISS
ISO
PMID:22045699
(PMID:18307982), (PMID:22045699)
RGD PMID:18307982, PMID:22045699, PMID:22045699 RGD:10047316 NCBI chr19:11,046,905...11,057,440
Ensembl chr19:11,046,909...11,057,254
JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat containing alpha ISO (PMID:23246001) RGD PMID:23246001 NCBI chr 7:11,521,949...11,538,691
Ensembl chr 7:11,521,998...11,539,319
JBrowse link
G Ubqln1 ubiquilin 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:18307982)
Ensembl
UniProt
RGD
PMID:18307982 GO_REF:0000024, GO_REF:0000107 NCBI chr17:6,840,441...6,878,842
Ensembl chr17:6,840,463...6,878,844
JBrowse link
G Ubqln2 ubiquilin 2 ISO (PMID:18307982) RGD PMID:18307982 NCBI chr  X:18,723,313...18,726,732
Ensembl chr  X:18,723,341...18,726,732
JBrowse link
positive regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn3 ataxin 3 ISO (PMID:17000876) RGD PMID:17000876 NCBI chr 6:125,817,420...125,853,461
Ensembl chr 6:125,819,640...125,853,461
JBrowse link
G Bag6 BAG cochaperone 6 ISO (PMID:24424410) RGD PMID:24424410 NCBI chr20:5,124,512...5,138,084
Ensembl chr20:5,125,349...5,138,084
JBrowse link
G Rnf185 ring finger protein 185 ISS
ISO
GO_REF:0000024
(PMID:27485036)
UniProt
RGD
PMID:27485036 GO_REF:0000024 NCBI chr14:83,648,400...83,685,273
Ensembl chr14:83,648,402...83,685,273
JBrowse link
G Rnft1 ring finger protein, transmembrane 1 ISO (PMID:27485036) RGD PMID:27485036 NCBI chr10:73,807,455...73,821,178
Ensembl chr10:73,809,157...73,817,982
JBrowse link
G Tmem259 transmembrane protein 259 ISO
IBA
(MGI:MGI:5648655|PMID:25977983)
PMID:21873635
RGD PMID:25977983, PMID:21873635 MGI:MGI:5648655, RGD:13792537 NCBI chr 7:12,771,239...12,777,901
Ensembl chr 7:12,771,227...12,779,862
JBrowse link
G Tmem67 transmembrane protein 67 IMP RGD PMID:19815549 RGD:8554391 NCBI chr 5:25,666,138...25,721,056
Ensembl chr 5:25,666,137...25,721,072
JBrowse link
G Usp13 ubiquitin specific peptidase 13 ISO (PMID:24424410) RGD PMID:24424410 NCBI chr 2:119,197,153...119,317,507
Ensembl chr 2:119,197,239...119,317,500
JBrowse link
positive regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 ISO
IEA
(PMID:21810484)
GO_REF:0000107
RGD
Ensembl
PMID:21810484 GO_REF:0000107 NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
JBrowse link
G Apoe apolipoprotein E ISO
IEA
(PMID:15950758)
GO_REF:0000107
RGD
Ensembl
PMID:15950758 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 ISO (PMID:22848640) RGD PMID:22848640 NCBI chr 5:126,031,368...126,053,726
Ensembl chr 5:126,031,368...126,053,726
JBrowse link
positive regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldlr low density lipoprotein receptor IEA
ISO
GO_REF:0000107
(MGI:MGI:5902678|PMID:22383525)
Ensembl
RGD
PMID:22383525 GO_REF:0000107, MGI:MGI:5902678 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Lrp1 LDL receptor related protein 1 ISO (PMID:23152628) RGD PMID:23152628 NCBI chr 7:70,846,313...70,927,028
Ensembl chr 7:70,846,344...70,926,903
JBrowse link
G Lrp2 LDL receptor related protein 2 ISO (PMID:9228033) RGD PMID:9228033 NCBI chr 3:55,665,153...55,822,484
Ensembl chr 3:55,665,145...55,822,551
JBrowse link
positive regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 ADAM metallopeptidase domain 8 ISO
IBA
(MGI:MGI:3040545|PMID:14761956)
PMID:21873635
(PMID:15220135), (PMID:17548643)
RGD PMID:14761956, PMID:15220135, PMID:17548643, PMID:21873635 MGI:MGI:3040545, RGD:13792537 NCBI chr 1:212,317,510...212,332,895
Ensembl chr 1:212,317,848...212,330,349
JBrowse link
G Adam9 ADAM metallopeptidase domain 9 ISO (MGI:MGI:1326990|PMID:9857183) RGD PMID:9857183 MGI:MGI:1326990 NCBI chr16:71,810,377...71,887,926
Ensembl chr16:71,810,377...71,887,926
JBrowse link
G Adra2a adrenoceptor alpha 2A ISO (PMID:17655843) RGD PMID:17655843 NCBI chr 1:274,766,283...274,769,083
Ensembl chr 1:274,766,283...274,769,081
JBrowse link
G Apoe apolipoprotein E IEA
ISO
GO_REF:0000107
UniProtKB:P05067:PRO_0000000092 (PMID:15950758), (PMID:25015123)
Ensembl
RGD
PMID:15950758, PMID:25015123 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G App amyloid beta precursor protein ISO UniProtKB:P02649 (PMID:25015123) RGD PMID:25015123 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5447609|PMID:17720976)
(PMID:17720976)
Ensembl
UniProt
RGD
PMID:17720976 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5447609 NCBI chr17:42,085,027...42,131,344
Ensembl chr17:42,085,028...42,127,678
JBrowse link
G Ifng interferon gamma ISO (PMID:18373975) RGD PMID:18373975 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419
JBrowse link
G Il1b interleukin 1 beta ISO
IEA
(PMID:18373975)
GO_REF:0000107
RGD
Ensembl
PMID:18373975 GO_REF:0000107 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Nrdc nardilysin convertase ISO
IEA
(PMID:18355445)
GO_REF:0000107
RGD
Ensembl
PMID:18355445 GO_REF:0000107 NCBI chr 5:128,629,949...128,694,209
Ensembl chr 5:128,629,942...128,694,060
JBrowse link
G Pacsin3 protein kinase C and casein kinase substrate in neurons 3 ISO (PMID:15280379) RGD PMID:15280379 NCBI chr 3:80,072,425...80,081,058
Ensembl chr 3:80,072,489...80,081,047
JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a ISO (MGI:MGI:5702499|PMID:26651291) RGD PMID:26651291 MGI:MGI:5702499 NCBI chr 1:134,699,053...134,742,512
Ensembl chr 1:134,699,299...134,742,514
JBrowse link
G Sh3d19 SH3 domain containing 19 ISO (PMID:15280379) RGD PMID:15280379 NCBI chr 2:185,268,028...185,431,834
Ensembl chr 2:185,268,259...185,431,354
JBrowse link
G Snx33 sorting nexin 33 ISO (PMID:18353773), (PMID:18419754) RGD PMID:18353773, PMID:18419754 NCBI chr 8:61,584,656...61,596,055
Ensembl chr 8:61,584,656...61,595,032
JBrowse link
G Snx9 sorting nexin 9 ISO (PMID:18353773) RGD PMID:18353773 NCBI chr 1:46,780,142...46,826,250
Ensembl chr 1:46,779,860...46,825,830
JBrowse link
G Tnf tumor necrosis factor ISO (PMID:18373975) RGD PMID:18373975 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B ISO
IBA
(PMID:22480688)
PMID:21873635
RGD PMID:22480688, PMID:21873635 RGD:13792537 NCBI chr 5:163,136,390...163,167,299
Ensembl chr 5:163,136,390...163,167,299
JBrowse link
positive regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag2 BAG cochaperone 2 ISO UniProtKB:P10636 (MGI:MGI:6148635|PMID:19228967) RGD PMID:19228967 MGI:MGI:6148635 NCBI chr 9:38,456,487...38,467,120
Ensembl chr 9:38,456,468...38,467,118
JBrowse link
G Dab2ip DAB2 interacting protein IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:20080667)
Ensembl
UniProt
RGD
PMID:20080667 GO_REF:0000024, GO_REF:0000107 NCBI chr 3:14,889,263...15,060,286
Ensembl chr 3:14,889,510...15,060,286
JBrowse link
G Ddrgk1 DDRGK domain containing 1 ISO (PMID:23675531) RGD PMID:23675531 NCBI chr 3:123,195,580...123,206,828
Ensembl chr 3:123,195,580...123,206,828
JBrowse link
G Ecscr endothelial cell surface expressed chemotaxis and apoptosis regulator ISO
IBA
(PMID:19416853)
PMID:21873635
RGD PMID:19416853, PMID:21873635 RGD:13792537 NCBI chr18:28,507,167...28,516,567
Ensembl chr18:28,506,934...28,516,209
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 ISO (PMID:23858059)
(MGI:MGI:5543313|PMID:23858059)
RGD PMID:23858059 MGI:MGI:5543313 NCBI chr 2:184,230,191...184,309,805
Ensembl chr 2:184,231,260...184,309,664
JBrowse link
G Fmr1 FMRP translational regulator 1 ISO
ISS
(MGI:MGI:5770038|PMID:24709664)
GO_REF:0000024
RGD
UniProt
PMID:24709664 GO_REF:0000024, MGI:MGI:5770038 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 ISO (PMID:22180649) RGD PMID:22180649 NCBI chr11:32,434,786...32,447,264
Ensembl chr11:32,440,237...32,447,259
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator ISO
ISS
(PMID:16300740)
GO_REF:0000024
RGD
UniProt
PMID:16300740 GO_REF:0000024 NCBI chr 1:194,767,484...194,769,519
Ensembl chr 1:194,767,474...194,769,524
JBrowse link
G Osbpl7 oxysterol binding protein-like 7 ISO (PMID:21669198) RGD PMID:21669198 NCBI chr10:84,986,330...85,003,947
Ensembl chr10:84,986,328...85,004,562
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO UniProtKB:Q9WVS6 (PMID:23858059) RGD PMID:23858059 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Psmc1 proteasome 26S subunit, ATPase 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:124,123,283...124,135,644
Ensembl chr 6:124,123,228...124,135,658
JBrowse link
G Psmc2 proteasome 26S subunit, ATPase 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:9,867,132...9,881,383
Ensembl chr 4:9,867,101...9,881,484
JBrowse link
G Psmc4 proteasome 26S subunit, ATPase 4 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:84,978,220...84,986,536
Ensembl chr 1:84,978,206...84,986,581
JBrowse link
G Rnf40 ring finger protein 40 IDA RGD PMID:12121982 RGD:633892 NCBI chr 1:199,037,472...199,052,823
Ensembl chr 1:199,037,544...199,052,172
JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 ISO (PMID:21603654) RGD PMID:21603654 NCBI chr 7:40,171,957...40,217,056
Ensembl chr 7:40,171,963...40,217,056
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:MGI:6150565|PMID:29518356) RGD PMID:29518356 MGI:MGI:6150565 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
G Xbp1 X-box binding protein 1 ISO (MGI:MGI:4946566|PMID:21317886) RGD PMID:21317886 MGI:MGI:4946566 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145
JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO (MGI:MGI:3589701|PMID:15937334) RGD PMID:15937334 MGI:MGI:3589701 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Ankib1 ankyrin repeat and IBR domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:27,473,477...27,597,206
Ensembl chr 4:27,473,477...27,597,206
JBrowse link
G Arih1 ariadne RBR E3 ubiquitin protein ligase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:64,166,359...64,268,555
Ensembl chr 8:64,166,360...64,268,555
JBrowse link
G Arih2 ariadne RBR E3 ubiquitin protein ligase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:117,387,004...117,446,085
Ensembl chr 8:117,387,010...117,446,019
JBrowse link
G Atg7 autophagy related 7 ISO MGI:MGI:2446434|MGI:MGI:3587769|MGI:MGI:3691571 (MGI:MGI:5465208|PMID:23152632) RGD PMID:23152632 MGI:MGI:5465208 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Aurka aurora kinase A ISO
IEA
(MGI:MGI:3697244|PMID:17060449)
GO_REF:0000107
RGD
Ensembl
PMID:17060449 GO_REF:0000107, MGI:MGI:3697244 NCBI chr 3:170,364,177...170,380,278
Ensembl chr 3:170,364,181...170,378,210
JBrowse link
G Axin1 axin 1 ISO (MGI:MGI:3628833|PMID:16601693) RGD PMID:16601693 MGI:MGI:3628833
G Bag2 BAG cochaperone 2 NOT ISO UniProtKB:P10636 (MGI:MGI:6148635|PMID:19228967) RGD PMID:19228967 MGI:MGI:6148635 NCBI chr 9:38,456,487...38,467,120
Ensembl chr 9:38,456,468...38,467,118
JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 ISO UniProtKB:Q99496 (PMID:22302990) RGD PMID:22302990 NCBI chr 2:123,283,402...123,322,991
Ensembl chr 2:123,283,388...123,323,170
JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 ISO (PMID:25974097) RGD PMID:25974097 NCBI chr19:55,438,409...55,510,652
Ensembl chr19:55,441,572...55,510,460
JBrowse link
G Chfr checkpoint with forkhead and ring finger domains ISO (MGI:MGI:5310666|PMID:22285184) RGD PMID:22285184 MGI:MGI:5310666 NCBI chr12:52,562,594...52,596,162
Ensembl chr12:52,562,597...52,596,076
JBrowse link
G Clu clusterin IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:20068069)
Ensembl
UniProt
RGD
PMID:20068069, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr15:42,626,612...42,665,858
Ensembl chr15:42,640,146...42,665,857
JBrowse link
G Cop1 COP1, E3 ubiquitin ligase ISO (PMID:19805145) RGD PMID:19805145 NCBI chr13:76,942,883...77,076,015
Ensembl chr13:76,942,928...77,075,723
JBrowse link
G Csnk1a1 casein kinase 1, alpha 1 IEA
ISO
GO_REF:0000107
(PMID:11955436), (PMID:19364825)
Ensembl
RGD
PMID:11955436, PMID:19364825 GO_REF:0000107 NCBI chr18:56,887,722...56,910,610
Ensembl chr18:56,887,354...56,918,345
JBrowse link
G Csnk1d casein kinase 1, delta ISO
IBA
ISS
(MGI:MGI:3849793|PMID:19414593)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19414593, PMID:21873635 GO_REF:0000024, MGI:MGI:3849793, RGD:13792537 NCBI chr10:110,147,786...110,182,413
Ensembl chr10:110,148,600...110,182,408
JBrowse link
G Csnk1e casein kinase 1, epsilon ISO
IBA
(MGI:MGI:3849793|PMID:19414593)
PMID:21873635
RGD PMID:19414593, PMID:21873635 MGI:MGI:3849793, RGD:13792537 NCBI chr 7:120,651,976...120,675,559
Ensembl chr 7:120,651,881...120,672,359
JBrowse link
G Dab2 DAB adaptor protein 2 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:55,747,353...55,768,848
Ensembl chr 2:55,747,318...55,768,270
JBrowse link
G Dda1 DET1 and DDB1 associated 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:19,877,873...19,885,501
Ensembl chr16:19,881,122...19,885,500
JBrowse link
G Ddrgk1 DDRGK domain containing 1 ISO (PMID:23675531) RGD PMID:23675531 NCBI chr 3:123,195,580...123,206,828
Ensembl chr 3:123,195,580...123,206,828
JBrowse link
G Det1 DET1 partner of COP1 E3 ubiquitin ligase ISO UniProtKB:Q8NHY2 (PMID:14739464) RGD PMID:14739464 NCBI chr 1:140,519,755...140,535,969
Ensembl chr 1:140,519,702...140,535,934
JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 ISO
IBA
(PMID:15936278)
PMID:21873635
RGD PMID:15936278, PMID:21873635 RGD:13792537 NCBI chr 9:82,436,453...82,444,669
Ensembl chr 9:82,436,458...82,444,668
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO (PMID:20177058) RGD PMID:20177058 NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
JBrowse link
G Fam122a family with sequence similarity 122A ISS
ISO
GO_REF:0000024
(PMID:27588481)
UniProt
RGD
PMID:27588481 GO_REF:0000024 NCBI chr 1:242,372,458...242,373,764
Ensembl chr 1:242,372,458...242,373,764
JBrowse link
G Fbxo22 F-box protein 22 ISO
IBA
(MGI:MGI:3840749|PMID:19319192)
PMID:21873635
RGD PMID:19319192, PMID:21873635 MGI:MGI:3840749, RGD:13792537 NCBI chr 8:59,770,032...59,786,061
Ensembl chr 8:59,769,994...59,786,065
JBrowse link
G Gba glucosylceramidase beta ISO (MGI:MGI:5501380|PMID:23707074) RGD PMID:23707074 MGI:MGI:5501380 NCBI chr 2:188,511,781...188,522,602
Ensembl chr 2:188,516,582...188,522,601
JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit ISO MGI:MGI:2387010 (MGI:MGI:3695876|PMID:17189825) RGD PMID:17189825 MGI:MGI:3695876 NCBI chr 8:85,059,051...85,097,471
Ensembl chr 8:85,059,051...85,097,468
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha ISO (PMID:25897075) RGD PMID:25897075 NCBI chr 1:82,097,244...82,108,238
Ensembl chr 1:82,097,247...82,108,203
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO
IEA
MGI:MGI:1924375|MGI:MGI:3039600 (MGI:MGI:5437589|PMID:22660580)
(PMID:19364825), (PMID:25897075)
GO_REF:0000107
RGD
Ensembl
PMID:19364825, PMID:22660580, PMID:25897075 GO_REF:0000107, MGI:MGI:5437589 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A ISO
IBA
(PMID:24613385)
PMID:21873635
RGD PMID:24613385, PMID:21873635 RGD:13792537 NCBI chr20:4,875,834...4,881,751
Ensembl chr20:4,877,324...4,879,779
JBrowse link
G Hspa1b heat shock protein family A (Hsp70) member 1B ISO
IBA
(PMID:24613385)
PMID:21873635
RGD PMID:24613385, PMID:21873635 RGD:13792537 NCBI chr20:4,877,638...4,880,112
Ensembl chr20:2,699,712...2,701,815
JBrowse link
G Hspbp1 HSPA (Hsp70) binding protein 1 ISO (PMID:16831871) RGD PMID:16831871 NCBI chr 1:72,732,418...72,756,087
Ensembl chr 1:72,732,668...72,756,082
JBrowse link
G Il33 interleukin 33 ISO
IEA
MGI:MGI:1861437|MGI:MGI:3039600 (MGI:MGI:5437589|PMID:22660580)
GO_REF:0000107
RGD
Ensembl
PMID:22660580 GO_REF:0000107, MGI:MGI:5437589 NCBI chr 1:248,112,611...248,147,030
Ensembl chr 1:248,132,090...248,147,029
JBrowse link
G Klhl40 kelch-like family member 40 ISO (MGI:MGI:5700633|PMID:25940086) RGD PMID:25940086 MGI:MGI:5700633 NCBI chr 8:130,416,265...130,421,871
Ensembl chr 8:130,416,355...130,421,871
JBrowse link
G LOC108348108 heat shock 70 kDa protein 1A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:2,699,707...2,701,856
Ensembl chr20:4,877,324...4,879,779
Ensembl chr20:4,877,324...4,879,779
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 ISO (MGI:MGI:4454597|PMID:20457918) RGD PMID:20457918 MGI:MGI:4454597 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584
JBrowse link
G Mdm2 MDM2 proto-oncogene ISO (PMID:11278372) RGD PMID:11278372 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
G Nkd2 NKD inhibitor of WNT signaling pathway 2 ISO (PMID:20177058) RGD PMID:20177058 NCBI chr 1:32,054,390...32,085,416
Ensembl chr 1:32,058,044...32,084,877
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor ISO (MGI:MGI:5897550|PMID:21804542)
(PMID:25818168), (PMID:27323397)
RGD PMID:21804542, PMID:25818168, PMID:27323397 MGI:MGI:5897550 NCBI chr 1:77,836,522...77,843,991
Ensembl chr 1:77,836,196...77,844,189
JBrowse link
G Nub1 negative regulator of ubiquitin-like proteins 1 ISO (PMID:16707496) RGD PMID:16707496 NCBI chr 4:6,950,870...6,981,400
Ensembl chr 4:6,951,478...6,978,073
JBrowse link
G Pias1 protein inhibitor of activated STAT, 1 ISO (MGI:MGI:5487503|PMID:22406621) RGD PMID:22406621 MGI:MGI:5487503 NCBI chr 8:67,771,720...67,869,015
Ensembl chr 8:67,771,720...67,869,019
JBrowse link
G Plk1 polo-like kinase 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19473992)
Ensembl
UniProt
RGD
PMID:19473992 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:192,115,990...192,125,969
Ensembl chr 1:192,115,966...192,125,989
JBrowse link
G Plk2 polo-like kinase 2 IMP RGD PMID:18723513 RGD:7241135 NCBI chr 2:41,911,143...41,916,901
Ensembl chr 2:41,911,131...41,916,901
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 ISO
IEA
(PMID:17030191)
GO_REF:0000107
RGD
Ensembl
PMID:17030191 GO_REF:0000107 NCBI chr 7:134,702,964...134,799,437
Ensembl chr 7:134,702,964...134,722,215
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO
IBA
(MGI:MGI:5543313|PMID:23858059)
PMID:21873635
RGD PMID:23858059, PMID:21873635 MGI:MGI:5543313, RGD:13792537 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Psen1 presenilin 1 ISO (MGI:MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:MGI:4887523 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Psen2 presenilin 2 ISO (MGI:MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:MGI:4887523 NCBI chr13:98,513,600...98,539,347
Ensembl chr13:98,513,570...98,530,724
JBrowse link
G Psmd10 proteasome 26S subunit, non-ATPase 10 ISO
IEA
ISS
(PMID:16023600)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16023600 GO_REF:0000024, GO_REF:0000107 NCBI chr  X:112,323,188...112,328,642
Ensembl chr  X:112,323,187...112,328,642
JBrowse link
G Rack1 receptor for activated C kinase 1 ISO
ISS
(PMID:19785988)
GO_REF:0000024
RGD
UniProt
PMID:19785988 GO_REF:0000024 NCBI chr10:34,149,717...34,155,198
Ensembl chr10:34,149,717...34,155,198
Ensembl chr12:34,149,717...34,155,198
JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein ISO (PMID:26296656) RGD PMID:26296656 NCBI chr19:25,949,488...25,956,677
Ensembl chr19:25,949,490...25,955,391
JBrowse link
G Rbx1 ring-box 1 ISO UniProtKB:Q7L5Y6 (PMID:14739464) RGD PMID:14739464 NCBI chr 7:122,700,849...122,710,907
Ensembl chr 7:122,700,854...122,709,935
JBrowse link
G Rchy1 ring finger and CHY zinc finger domain containing 1 ISO (PMID:19483087) RGD PMID:19483087 NCBI chr14:17,615,968...17,631,715
Ensembl chr14:17,615,968...17,631,714
JBrowse link
G Rnf14 ring finger protein 14 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:31,443,424...31,468,641
Ensembl chr18:31,444,472...31,468,640
JBrowse link
G Rnf144a ring finger protein 144A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:45,509,895...45,629,233
Ensembl chr 6:45,509,787...45,629,168
JBrowse link
G Rnf144b ring finger protein 144B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:17,817,122...17,947,777
Ensembl chr17:17,817,100...17,947,777
JBrowse link
G Rnf180 ring finger protein 180 ISO
IBA
(MGI:MGI:3819024|PMID:18363970), (MGI:MGI:5505713|PMID:23926250)
PMID:21873635
RGD PMID:18363970, PMID:23926250, PMID:21873635 MGI:MGI:3819024, MGI:MGI:5505713, RGD:13792537 NCBI chr 2:35,718,100...35,892,578
Ensembl chr 2:35,718,889...35,870,578
JBrowse link
G Rnf19a ring finger protein 19A, RBR E3 ubiquitin protein ligase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:75,058,758...75,098,331
Ensembl chr 7:75,058,758...75,098,331
JBrowse link
G Rnf19b ring finger protein 19B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:147,246,032...147,270,892
Ensembl chr 5:147,246,037...147,270,957
JBrowse link
G Rnf217 ring finger protein 217 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:28,301,960...28,391,582
Ensembl chr 1:28,301,922...28,390,837
JBrowse link
G Sh3rf2 SH3 domain containing ring finger 2 IMP
ISO
PMID:22128169
(PMID:22128169)
RGD PMID:22128169, PMID:22128169 RGD:13673844 NCBI chr18:36,371,041...36,471,020
Ensembl chr18:36,371,041...36,471,015
JBrowse link
G Sirt2 sirtuin 2 ISO
ISS
(MGI:MGI:5574427|PMID:24681946)
GO_REF:0000024
RGD
UniProt
PMID:24681946 GO_REF:0000024, MGI:MGI:5574427 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link
G Smad7 SMAD family member 7 ISO
IEA
(PMID:11278251)
GO_REF:0000107
RGD
Ensembl
PMID:11278251 GO_REF:0000107 NCBI chr18:71,395,830...71,424,164
Ensembl chr18:71,395,830...71,424,157
JBrowse link
G Socs5 suppressor of cytokine signaling 5 ISO (PMID:15590694) RGD PMID:15590694 NCBI chr 6:10,671,311...10,705,610
Ensembl chr 6:10,674,371...10,704,977
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 ISO (PMID:11146632) RGD PMID:11146632 NCBI chr10:15,197,754...15,200,035
Ensembl chr10:15,197,803...15,200,117
JBrowse link
G Sumo1 small ubiquitin-like modifier 1 ISO (PMID:18408734) RGD PMID:18408734 NCBI chr 9:66,453,428...66,483,614
Ensembl chr 9:66,453,438...66,483,614
JBrowse link
G Sumo2 small ubiquitin-like modifier 2 ISO (PMID:18408734) RGD PMID:18408734 NCBI chr10:104,085,401...104,097,983
Ensembl chr10:104,086,002...104,097,812
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO (PMID:15053879) RGD PMID:15053879 NCBI chr  X:71,412,291...71,486,456
Ensembl chr  X:71,412,289...71,485,085
JBrowse link
G Trib1 tribbles pseudokinase 1 ISO
IBA
(MGI:MGI:4457446|PMID:20410507)
PMID:21873635
RGD PMID:20410507, PMID:21873635 MGI:MGI:4457446, RGD:13792537 NCBI chr 7:99,954,492...99,961,026
Ensembl chr 7:99,954,492...99,961,026
JBrowse link
G Trib2 tribbles pseudokinase 2 ISO
IBA
(MGI:MGI:4457446|PMID:20410507)
PMID:21873635
RGD PMID:20410507, PMID:21873635 MGI:MGI:4457446, RGD:13792537 NCBI chr 6:41,016,722...41,040,972
Ensembl chr 6:41,016,730...41,039,437
JBrowse link
G Trib3 tribbles pseudokinase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:147,814,056...147,819,650
Ensembl chr 3:147,813,473...147,819,571
JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 IMP RGD PMID:12750002 RGD:1299567 NCBI chr11:89,557,273...89,591,175
Ensembl chr11:89,557,273...89,591,175
JBrowse link
G Usp5 ubiquitin specific peptidase 5 ISO (PMID:19098288) RGD PMID:19098288 NCBI chr 4:157,332,735...157,347,803
Ensembl chr 4:157,332,740...157,347,803
JBrowse link
G Vcp valosin-containing protein IMP
ISO
(PMID:9452483) RGD PMID:9452483, PMID:16103111 RGD:1599730 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953
JBrowse link
G Zer1 zyg-11 related, cell cycle regulator ISO (PMID:31273098) RGD PMID:31273098 NCBI chr 3:8,662,579...8,690,486
Ensembl chr 3:8,662,579...8,690,305
JBrowse link
G Zfand2a zinc finger AN1-type containing 2A ISO MGI:MGI:3664591 (MGI:MGI:3663213|PMID:16973439) RGD PMID:16973439 MGI:MGI:3663213 NCBI chr12:17,252,093...17,263,477
Ensembl chr12:17,252,093...17,263,477
JBrowse link
G Zyg11b zyg-11 family member B, cell cycle regulator ISO (PMID:31273098) RGD PMID:31273098 NCBI chr 5:127,844,062...127,878,792
Ensembl chr 5:127,847,129...127,878,792
JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo-like kinase 3 ISO
ISS
(PMID:20889502)
GO_REF:0000024
RGD
UniProt
PMID:20889502 GO_REF:0000024 NCBI chr 5:135,997,725...136,002,900
Ensembl chr 5:135,997,725...136,002,900
JBrowse link
G Sirt2 sirtuin 2 IEA
ISO
ISS
GO_REF:0000107
(PMID:24681946)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24681946 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link
positive regulation of protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO
IEA
IBA
UniProtKB:O43255|UniProtKB:P41221 (PMID:12952940)
GO_REF:0000107
PMID:21873635
(MGI:MGI:3618985|PMID:16478791)
RGD
Ensembl
PMID:12952940, PMID:16478791, PMID:21873635 GO_REF:0000107, MGI:MGI:3618985, RGD:13792537 NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531
JBrowse link
G Apc2 APC regulator of WNT signaling pathway 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:12,258,468...12,280,459
Ensembl chr 7:12,258,468...12,275,609
JBrowse link
G Arel1 apoptosis resistant E3 ubiquitin protein ligase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:108,630,790...108,796,096
Ensembl chr 6:108,635,220...108,796,124
JBrowse link
G Asb5 ankyrin repeat and SOCS box-containing 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:39,985,233...40,050,663
Ensembl chr16:39,985,234...40,025,401
JBrowse link
G Asb9 ankyrin repeat and SOCS box-containing 9 ISO
IBA
(PMID:17148442)
PMID:21873635
RGD PMID:17148442, PMID:21873635 RGD:13792537 NCBI chr  X:31,700,637...31,745,790
Ensembl chr  X:31,700,633...31,780,425
JBrowse link
G Atg4b autophagy related 4B, cysteine peptidase IMP RGD PMID:16874114 RGD:2301238 NCBI chr 9:100,888,457...100,920,123
Ensembl chr 9:100,888,501...100,918,637
JBrowse link
G Atg7 autophagy related 7 ISO
ISS
(PMID:20543840)
GO_REF:0000024
RGD
UniProt
PMID:20543840 GO_REF:0000024 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Axin1 axin 1 ISO (PMID:9601641) RGD PMID:9601641
G C4bpa complement component 4 binding protein, alpha ISO
IEA
(PMID:22333221)
GO_REF:0000107
RGD
Ensembl
PMID:22333221 GO_REF:0000107 NCBI chr13:47,342,090...47,377,580
Ensembl chr13:47,342,079...47,377,703
JBrowse link
G C4bpb complement component 4 binding protein, beta ISO
IEA
(PMID:22333221)
GO_REF:0000107
RGD
Ensembl
PMID:22333221 GO_REF:0000107 NCBI chr13:47,387,173...47,398,115
Ensembl chr13:47,387,173...47,397,890
JBrowse link
G Cblb Cbl proto-oncogene B ISO MGI:MGI:2180572 (MGI:MGI:3038342|PMID:14973438) RGD PMID:14973438 MGI:MGI:3038342 NCBI chr11:51,037,383...51,202,761
Ensembl chr11:51,037,393...51,202,820
JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B ISO (PMID:19056892) RGD PMID:19056892 NCBI chr 4:168,689,043...168,694,159
Ensembl chr 4:168,689,163...168,693,964
JBrowse link
G Crebrf CREB3 regulatory factor ISO (PMID:18391022) RGD PMID:18391022 NCBI chr10:16,693,846...16,753,162
Ensembl chr10:16,694,792...16,752,205
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 ISO
ISS
(PMID:20625391)
GO_REF:0000024
RGD
UniProt
PMID:20625391 GO_REF:0000024 NCBI chr 3:147,713,808...147,760,375
Ensembl chr 3:147,713,821...147,757,862
JBrowse link
G Cul4b cullin 4B ISO (MGI:MGI:3820198|PMID:18602923) RGD PMID:18602923 MGI:MGI:3820198 NCBI chr  X:124,831,391...124,870,329
Ensembl chr  X:124,832,628...124,870,329
JBrowse link
G Dab2ip DAB2 interacting protein ISO
ISS
(MGI:MGI:4453088|PMID:19948740)
GO_REF:0000024
RGD
UniProt
PMID:19948740 GO_REF:0000024, MGI:MGI:4453088 NCBI chr 3:14,889,263...15,060,286
Ensembl chr 3:14,889,510...15,060,286
JBrowse link
G Dact1 dishevelled-binding antagonist of beta-catenin 1 ISO (PMID:16446366) RGD PMID:16446366 NCBI chr 6:93,740,440...93,751,003
Ensembl chr 6:93,740,586...93,749,809
JBrowse link
G Ddb1 damage-specific DNA binding protein 1 IEA
ISO
GO_REF:0000107
(PMID:16949367)
Ensembl
RGD
PMID:16949367 GO_REF:0000107 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347
JBrowse link
G Dtl denticleless E3 ubiquitin protein ligase homolog ISO (PMID:16949367) RGD PMID:16949367 NCBI chr13:110,219,276...110,257,345
Ensembl chr13:110,220,283...110,257,367
JBrowse link
G Egln2 egl-9 family hypoxia-inducible factor 2 ISO (PMID:11595184) RGD PMID:11595184 NCBI chr 1:83,969,456...83,977,665
Ensembl chr 1:83,969,457...83,977,236
JBrowse link
G Foxo1 forkhead box O1 ISO
ISS
(PMID:20543840)
GO_REF:0000024
RGD
UniProt
PMID:20543840 GO_REF:0000024 NCBI chr 2:141,451,234...141,527,016
Ensembl chr 2:141,451,234...141,527,016
JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 ISO (PMID:11459825) RGD PMID:11459825 NCBI chr 7:11,201,690...11,213,614
Ensembl chr 7:11,201,690...11,213,613
JBrowse link
G Gga1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 ISO MGI:MGI:2384159 (MGI:MGI:5432614|PMID:22836275) RGD PMID:22836275 MGI:MGI:5432614 NCBI chr 7:120,102,596...120,119,738
Ensembl chr 7:120,106,901...120,119,737
JBrowse link
G Gga3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 ISO MGI:MGI:2146207 (MGI:MGI:5432614|PMID:22836275) RGD PMID:22836275 MGI:MGI:5432614 NCBI chr10:104,137,655...104,156,576
Ensembl chr10:104,137,655...104,156,576
JBrowse link
G Gja1 gap junction protein, alpha 1 IDA RGD PMID:12952975 RGD:1582696 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Gpc3 glypican 3 ISO
ISS
IEA
(MGI:MGI:3790551|PMID:18477453)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:18477453 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3790551 NCBI chr  X:139,579,268...139,947,093
Ensembl chr  X:139,579,268...139,916,883
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IMP RGD PMID:17686886 RGD:10045647 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Hace1 HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:50,652,489...50,783,937
Ensembl chr20:50,652,745...50,783,937
JBrowse link
G Hecw1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:53,229,997...53,777,474
Ensembl chr17:53,229,785...53,773,657
JBrowse link
G Hecw2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:60,451,476...60,843,160
Ensembl chr 9:60,457,215...60,672,246
JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:21,474,627...21,603,348
Ensembl chr  X:21,499,934...21,598,876
JBrowse link
G Ier3 immediate early response 3 ISO (MGI:MGI:4437986|PMID:19096392) RGD PMID:19096392 MGI:MGI:4437986 NCBI chr20:3,438,798...3,440,002
Ensembl chr20:3,438,798...3,440,769
JBrowse link
G Itch itchy E3 ubiquitin protein ligase ISO
IBA
MGI:MGI:1856404 (MGI:MGI:3038342|PMID:14973438)
PMID:21873635
RGD PMID:14973438, PMID:21873635 MGI:MGI:3038342, RGD:13792537 NCBI chr 3:150,660,665...150,752,016
Ensembl chr 3:150,686,638...150,749,827
JBrowse link
G Lpcat1 lysophosphatidylcholine acyltransferase 1 ISO (MGI:MGI:4460850|PMID:20018880) RGD PMID:20018880 MGI:MGI:4460850 NCBI chr 1:32,379,431...32,429,917
Ensembl chr 1:32,379,432...32,429,917
JBrowse link
G Mapk15 mitogen-activated protein kinase 15 IMP Human Estrogen Receptor alpha RGD PMID:12917323 RGD:2304230 NCBI chr 7:117,041,287...117,061,799
Ensembl chr 7:117,055,395...117,061,047
JBrowse link
G Mylip myosin regulatory light chain interacting protein ISO (MGI:MGI:3849777|PMID:19520913) RGD PMID:19520913 MGI:MGI:3849777 NCBI chr17:19,682,040...19,703,681
Ensembl chr17:19,682,040...19,703,681
JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 ISO MGI:MGI:3695433 (MGI:MGI:3694584|PMID:17137798) RGD PMID:17137798 MGI:MGI:3694584 NCBI chr18:31,574,759...31,625,286
Ensembl chr18:31,574,821...31,625,274
JBrowse link
G Ndufa13 NADH:ubiquinone oxidoreductase subunit A13 ISO UniProtKB:O43464 (PMID:17297443) RGD PMID:17297443 NCBI chr16:21,275,311...21,282,246
Ensembl chr16:21,275,311...21,282,246
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase ISO
IBA
IEA
(PMID:14973438)
PMID:21873635
GO_REF:0000107
(MGI:MGI:2176314|PMID:11748237)
RGD
Ensembl
PMID:11748237, PMID:14973438, PMID:21873635 GO_REF:0000107, MGI:MGI:2176314, RGD:13792537 NCBI chr 8:79,323,408...79,408,842
Ensembl chr 8:79,323,408...79,408,833
JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:18174164, PMID:21873635 RGD:6893331, RGD:13792537 NCBI chr18:60,392,376...60,719,720
Ensembl chr18:60,392,376...60,719,720
JBrowse link
G Nkd1 NKD inhibitor of WNT signaling pathway 1 ISO (PMID:15687260) RGD PMID:15687260 NCBI chr19:19,434,720...19,509,087
Ensembl chr19:19,436,333...19,509,087
JBrowse link
G Nsf N-ethylmaleimide sensitive factor, vesicle fusing ATPase ISO
IEA
(PMID:22045810)
GO_REF:0000107
RGD
Ensembl
PMID:22045810 GO_REF:0000107 NCBI chr10:91,879,608...91,986,242
Ensembl chr10:91,878,633...92,008,082
JBrowse link
G Oaz1 ornithine decarboxylase antizyme 1 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(MGI:MGI:5574513|PMID:24967154)
(PMID:17900240)
Ensembl
UniProt
RGD
PMID:17900240, PMID:24967154, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5574513, RGD:13792537 NCBI chr 7:11,752,127...11,754,587
Ensembl chr 7:11,752,412...11,754,508
JBrowse link
G Oaz2 ornithine decarboxylase antizyme 2 ISO
IBA
(MGI:MGI:5574513|PMID:24967154)
PMID:21873635
RGD PMID:24967154, PMID:21873635 MGI:MGI:5574513, RGD:13792537 NCBI chr 8:71,216,011...71,229,788
Ensembl chr 8:71,216,178...71,228,713
JBrowse link
G Oaz3 ornithine decarboxylase antizyme 3 ISO
IBA
(MGI:MGI:5574513|PMID:24967154)
PMID:21873635
RGD PMID:24967154, PMID:21873635 MGI:MGI:5574513, RGD:13792537 NCBI chr 2:195,675,925...195,678,859
Ensembl chr 2:195,676,048...195,678,848
JBrowse link
G Plk2 polo-like kinase 2 ISO (PMID:23983262) RGD PMID:23983262 NCBI chr 2:41,911,143...41,916,901
Ensembl chr 2:41,911,131...41,916,901
JBrowse link
G Ppp2r3a protein phosphatase 2, regulatory subunit B'', alpha ISO (PMID:15687260) RGD PMID:15687260 NCBI chr 8:109,481,352...109,621,462
Ensembl chr 8:109,482,614...109,621,408
JBrowse link
G Rab7a RAB7A, member RAS oncogene family ISO (PMID:22072966) RGD PMID:22072966 NCBI chr 4:119,910,461...119,963,065
Ensembl chr 4:119,910,478...119,959,173
JBrowse link
G Rhbdd1 rhomboid domain containing 1 ISS
ISO
PMID:18953687
(PMID:18953687), (PMID:22624035)
RGD PMID:18953687, PMID:22624035, PMID:18953687, PMID:22624035 RGD:8554435, RGD:8553377 NCBI chr 9:88,110,731...88,229,462
Ensembl chr 9:88,110,731...88,229,479
JBrowse link
G Rhbdd3 rhomboid domain containing 3 ISO (MGI:MGI:5492204|PMID:23610400) RGD PMID:23610400 MGI:MGI:5492204 NCBI chr14:85,350,852...85,357,029
Ensembl chr14:85,351,358...85,357,023
JBrowse link
G Rilp Rab interacting lysosomal protein ISO (PMID:17959629) RGD PMID:17959629 NCBI chr10:63,658,451...63,662,428
Ensembl chr10:63,659,085...63,662,050
JBrowse link
G Rnf41 ring finger protein 41 ISO (PMID:27353365) RGD PMID:27353365 NCBI chr 7:2,827,242...2,854,230
Ensembl chr 7:2,827,247...2,852,681
JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein ISO (PMID:21242315) RGD PMID:21242315 NCBI chr 2:200,076,079...200,096,861
Ensembl chr 2:200,076,054...200,098,076
JBrowse link
G Sgsm3 small G protein signaling modulator 3 IEA
ISO
GO_REF:0000107
(MGI:MGI:3689782|PMID:15709751)
Ensembl
RGD
PMID:15709751 GO_REF:0000107, MGI:MGI:3689782 NCBI chr 7:122,203,498...122,232,993
Ensembl chr 7:122,203,532...122,232,991
JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:11,433,815...11,526,465
Ensembl chr12:11,407,213...11,526,465
JBrowse link
G Smurf2 SMAD specific E3 ubiquitin protein ligase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:95,018,050...95,118,107
Ensembl chr10:95,018,059...95,062,987
JBrowse link
G Snf8 SNF8 subunit of ESCRT-II ISO (PMID:17959629) RGD PMID:17959629 NCBI chr10:83,856,331...83,868,621
Ensembl chr10:83,856,280...83,868,598
JBrowse link
G Snx1 sorting nexin 1 IMP RGD PMID:11110793 RGD:68866 NCBI chr 8:71,745,687...71,786,182
Ensembl chr 8:71,745,896...71,784,551
JBrowse link
G Sorl1 sortilin related receptor 1 ISO (PMID:24523320) RGD PMID:24523320 NCBI chr 8:46,228,077...46,287,171 JBrowse link
G Sox17 SRY-box transcription factor 17 ISO (MGI:MGI:4887291|PMID:20802155) RGD PMID:20802155 MGI:MGI:4887291 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (MGI:MGI:3839710|PMID:19047045) RGD PMID:19047045 MGI:MGI:3839710 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Stx5 syntaxin 5 ISO (PMID:21242315) RGD PMID:21242315 NCBI chr 1:224,939,497...224,955,658
Ensembl chr 1:224,939,497...224,955,657
JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase ISO (PMID:23275542) RGD PMID:23275542 NCBI chr 2:157,316,293...157,342,979
Ensembl chr 2:157,316,266...157,341,469
JBrowse link
G Tnf tumor necrosis factor ISO (PMID:18632959) RGD PMID:18632959 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 ISO (PMID:21127049) RGD PMID:21127049 NCBI chr 1:14,401,103...14,416,369
Ensembl chr 1:14,402,913...14,412,807
JBrowse link
G Tnfsf12 TNF superfamily member 12 ISO (PMID:17389268) RGD PMID:17389268 NCBI chr10:56,290,780...56,300,137
Ensembl chr10:56,290,780...56,300,077
JBrowse link
G Trim32 tripartite motif-containing 32 ISS
ISO
GO_REF:0000024
(MGI:MGI:3610252|PMID:16243356), (MGI:MGI:3836317|PMID:19269368)
BHF-UCL
RGD
PMID:16243356, PMID:19269368 GO_REF:0000024, MGI:MGI:3610252, MGI:MGI:3836317 NCBI chr 5:81,431,554...81,449,023
Ensembl chr 5:81,431,600...81,442,451
JBrowse link
G Vcp valosin-containing protein ISO (PMID:11483959), (PMID:18775313) RGD PMID:11483959, PMID:18775313 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953
JBrowse link
G Vip vasoactive intestinal peptide ISO
IBA
IEA
IDA
(MGI:MGI:5318038|PMID:9603988)
PMID:21873635
(PMID:9603988)
GO_REF:0000107
RGD
Ensembl
PMID:9603988, PMID:21873635, PMID:9603988 GO_REF:0000107, MGI:MGI:5318038, RGD:13792537, RGD:8554017 NCBI chr 1:42,169,307...42,177,582
Ensembl chr 1:42,169,501...42,177,582
JBrowse link
G Vps28 VPS28 subunit of ESCRT-I IEA
ISO
GO_REF:0000107
(PMID:11916981)
Ensembl
RGD
PMID:11916981 GO_REF:0000107 NCBI chr 7:117,684,339...117,688,187
Ensembl chr 7:117,684,339...117,688,187
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
UniProtKB:O43255|UniProtKB:P25054 (PMID:12952940)
GO_REF:0000107
RGD
Ensembl
PMID:12952940 GO_REF:0000107 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Wwp1 WW domain containing E3 ubiquitin protein ligase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:33,608,489...33,696,487
Ensembl chr 5:33,609,136...33,664,435
JBrowse link
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:39,543,246...39,614,624
Ensembl chr19:39,543,242...39,614,625
JBrowse link
positive regulation of protein catabolic process in the vacuole term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 Cd81 molecule ISO
IEA
(PMID:25635054)
GO_REF:0000107
RGD
Ensembl
PMID:25635054 GO_REF:0000107 NCBI chr 1:216,237,663...216,253,460
Ensembl chr 1:216,237,697...216,253,311
JBrowse link
positive regulation of proteolysis involved in cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 ISO (PMID:24005319) RGD PMID:24005319 NCBI chr 5:150,719,570...150,723,287
Ensembl chr 5:150,719,569...150,723,321
JBrowse link
G Ctsc cathepsin C IDA PMID:18307834 ParkinsonsUK-UCL PMID:18307834 RGD:8661625 NCBI chr 1:151,918,514...151,949,979
Ensembl chr 1:151,918,571...151,949,983
JBrowse link
G Gba glucosylceramidase beta ISO (PMID:21700325)
(MGI:MGI:5141165|PMID:21700325)
RGD PMID:21700325 MGI:MGI:5141165 NCBI chr 2:188,511,781...188,522,602
Ensembl chr 2:188,516,582...188,522,601
JBrowse link
G Rgn regucalcin IDA RGD PMID:1513338 RGD:9590188 NCBI chr  X:1,833,484...1,848,904
Ensembl chr  X:1,833,492...1,848,904
JBrowse link
positive regulation of transcription factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxw8 F-box and WD repeat domain containing 8 ISO (MGI:MGI:6148490|PMID:29153991) RGD PMID:29153991 MGI:MGI:6148490 NCBI chr12:44,046,204...44,138,138
Ensembl chr12:44,046,217...44,138,138
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO (MGI:MGI:6148490|PMID:29153991) RGD PMID:29153991 MGI:MGI:6148490 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 IEA
ISO
GO_REF:0000107
(MGI:MGI:6148490|PMID:29153991)
Ensembl
RGD
PMID:29153991 GO_REF:0000107, MGI:MGI:6148490 NCBI chr10:35,333,859...35,374,364
Ensembl chr10:35,333,859...35,374,355
JBrowse link
G Sirt6 sirtuin 6 ISO (PMID:27457971) RGD PMID:27457971 NCBI chr 7:10,937,622...10,943,048
Ensembl chr 7:10,937,599...10,943,063
JBrowse link
positive regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl4 ATP/GTP binding protein-like 4 ISO MGI:MGI:5788002 (MGI:MGI:6149282|PMID:29593216) RGD PMID:29593216 MGI:MGI:6149282 NCBI chr 5:130,742,297...131,656,581
NCBI chr 5:130,286,393...130,305,884
Ensembl chr 5:131,380,297...131,455,211
Ensembl chr 5:131,380,297...131,455,211
JBrowse link
G Agtpbp1 ATP/GTP binding protein 1 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:5,510,009...5,614,416
Ensembl chr17:5,511,385...5,614,435
JBrowse link
G Axin1 axin 1 IDA
ISO
PMID:10228155
(MGI:MGI:3628833|PMID:16601693)
RGD PMID:16601693, PMID:10228155 MGI:MGI:3628833, RGD:8553327
G Ccdc22 coiled-coil domain containing 22 ISO
IBA
(PMID:23563313)
PMID:21873635
RGD PMID:23563313, PMID:21873635 RGD:13792537 NCBI chr  X:15,742,978...15,754,925
Ensembl chr  X:15,742,978...15,754,925
JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 NOT ISO
ISS
(PMID:16173922)
GO_REF:0000024
RGD
UniProt
PMID:16173922 GO_REF:0000024 NCBI chr10:84,780,644...84,789,800
Ensembl chr10:84,780,608...84,789,832
JBrowse link
G Clu clusterin ISO
IBA
ISS
(PMID:20068069)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20068069, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:42,626,612...42,665,858
Ensembl chr15:42,640,146...42,665,857
JBrowse link
G Disc1 DISC1 scaffold protein ISO (MGI:MGI:4837265|PMID:20880836) RGD PMID:20880836 MGI:MGI:4837265 NCBI chr19:57,818,838...58,069,992
Ensembl chr19:57,820,260...58,066,152
JBrowse link
G Egf epidermal growth factor ISO (MGI:MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:MGI:4887523 NCBI chr 2:68,820,616...68,895,537 JBrowse link
G Fbxo22 F-box protein 22 ISO (MGI:MGI:3840749|PMID:19319192) RGD PMID:19319192 MGI:MGI:3840749 NCBI chr 8:59,770,032...59,786,061
Ensembl chr 8:59,769,994...59,786,065
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 ISS
ISO
GO_REF:0000024
(MGI:MGI:6282935|PMID:27238018)
(PMID:20208556), (PMID:27238018)
UniProt
RGD
PMID:20208556, PMID:27238018 GO_REF:0000024, MGI:MGI:6282935 NCBI chr 2:184,230,191...184,309,805
Ensembl chr 2:184,231,260...184,309,664
JBrowse link
G Laptm5 lysosomal protein transmembrane 5 ISO (MGI:MGI:3803048|PMID:18619870) RGD PMID:18619870 MGI:MGI:3803048 NCBI chr 5:149,015,793...149,069,719
Ensembl chr 5:149,047,681...149,069,719
JBrowse link
G Pten phosphatase and tensin homolog ISO (PMID:21241890) RGD PMID:21241890 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Ptk2 protein tyrosine kinase 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5306293|PMID:18206965)
Ensembl
UniProt
RGD
PMID:18206965 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5306293 NCBI chr 7:114,436,419...114,611,317
Ensembl chr 7:114,437,361...114,590,119
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO
ISS
(MGI:MGI:4453113|PMID:19880522)
GO_REF:0000024
RGD
UniProt
PMID:19880522 GO_REF:0000024, MGI:MGI:4453113 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link
G Rnf139 ring finger protein 139 ISO (PMID:25239945) RGD PMID:25239945 NCBI chr 7:98,770,840...98,782,025
Ensembl chr 7:98,770,840...98,782,025
JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 ISO (PMID:21454619) RGD PMID:21454619 NCBI chr12:11,433,815...11,526,465
Ensembl chr12:11,407,213...11,526,465
JBrowse link
G Sumo3 small ubiquitin-like modifier 3 ISO (MGI:MGI:3813414|PMID:18644859) RGD PMID:18644859 MGI:MGI:3813414 NCBI chr20:11,726,488...11,737,050
Ensembl chr20:11,726,497...11,737,050
JBrowse link
G Trim67 tripartite motif-containing 67 ISO (MGI:MGI:5427306|PMID:22337885) RGD PMID:22337885 MGI:MGI:5427306 NCBI chr19:57,554,665...57,593,401
Ensembl chr19:57,556,694...57,592,722
JBrowse link
regulation of cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wdr91 WD repeat domain 91 ISO (PMID:27126989) RGD PMID:27126989 NCBI chr 4:62,398,073...62,438,958
Ensembl chr 4:62,398,797...62,438,958
JBrowse link
regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfap glial fibrillary acidic protein IMP
ISO
PMID:20797626
(PMID:20797626)
(MGI:MGI:4830420|PMID:20797626)
RGD PMID:20797626, PMID:20797626 MGI:MGI:4830420, RGD:10412296 NCBI chr10:90,990,762...90,999,435
Ensembl chr10:90,990,762...90,999,506
JBrowse link
regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 ISO
IBA
(MGI:MGI:5613477|PMID:15147274)
PMID:21873635
RGD PMID:15147274, PMID:21873635 MGI:MGI:5613477, RGD:13792537 NCBI chr19:11,046,905...11,057,440
Ensembl chr19:11,046,909...11,057,254
JBrowse link
regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp19 ubiquitin specific peptidase 19 ISO
IEA
(PMID:25088257)
GO_REF:0000107
RGD
Ensembl
PMID:25088257 GO_REF:0000107 NCBI chr 8:117,280,690...117,291,729
Ensembl chr 8:117,280,705...117,291,351
JBrowse link
regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mylip myosin regulatory light chain interacting protein ISO (MGI:MGI:3849777|PMID:19520913) RGD PMID:19520913 MGI:MGI:3849777 NCBI chr17:19,682,040...19,703,681
Ensembl chr17:19,682,040...19,703,681
JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 ISO MGI:MGI:3577021 (MGI:MGI:3576461|PMID:15805190), (MGI:MGI:3583861|PMID:15741654) RGD PMID:15741654, PMID:15805190 MGI:MGI:3576461, MGI:MGI:3583861 NCBI chr 5:126,031,368...126,053,726
Ensembl chr 5:126,031,368...126,053,726
JBrowse link
regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp13a2 ATPase cation transporting 13A2 ISO (MGI:MGI:5780535|PMID:24334770)
UniProtKB:Q9CTG6 (PMID:23499937), (PMID:24334770)
RGD PMID:23499937, PMID:24334770 MGI:MGI:5780535 NCBI chr 5:159,512,208...159,531,631
Ensembl chr 5:159,512,285...159,531,637
JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 ISO (MGI:MGI:6155546|PMID:29514215) RGD PMID:29514215 MGI:MGI:6155546 NCBI chr 2:127,706,618...127,784,129
Ensembl chr 2:127,699,761...127,781,003
JBrowse link
regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E IEA
ISO
GO_REF:0000107
(PMID:28111074)
Ensembl
RGD
PMID:28111074 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase ISO (MGI:MGI:3835892|PMID:19103752) RGD PMID:19103752 MGI:MGI:3835892 NCBI chr 1:265,100,094...265,270,263
Ensembl chr 1:265,157,379...265,269,837
JBrowse link
G Dlgap1 DLG associated protein 1 IMP PMID:15496675 BHF-UCL PMID:15496675 RGD:8553458 NCBI chr 9:118,277,046...119,159,807
Ensembl chr 9:118,586,179...119,158,196
JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 ISO
ISS
(PMID:19423554)
GO_REF:0000024
RGD
UniProt
PMID:19423554 GO_REF:0000024 NCBI chr 8:79,637,678...79,651,892
Ensembl chr 8:79,638,696...79,651,884
JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin ISO MGI:MGI:2182627 (MGI:MGI:5793002|PMID:27107699) RGD PMID:27107699 MGI:MGI:5793002 NCBI chr 1:5,448,958...5,571,512
Ensembl chr 1:5,448,958...5,571,512
JBrowse link
G Gpx1 glutathione peroxidase 1 ISO
IEA
(PMID:12751788)
GO_REF:0000107
RGD
Ensembl
PMID:12751788 GO_REF:0000107 NCBI chr 8:117,117,430...117,118,528
Ensembl chr 8:117,117,430...117,118,522
JBrowse link
G Nfe2l1 nuclear factor, erythroid 2-like 1 ISO MGI:MGI:3828165|MGI:MGI:6101514 (MGI:MGI:5913760|PMID:27920251), (MGI:MGI:6198859|PMID:29400713) RGD PMID:27920251, PMID:29400713 MGI:MGI:5913760, MGI:MGI:6198859 NCBI chr10:84,686,762...84,699,313
Ensembl chr10:84,682,460...84,698,886
JBrowse link
G Nudt15 nudix hydrolase 15 ISO (PMID:19419956) RGD PMID:19419956 NCBI chr15:55,417,774...55,456,698
Ensembl chr15:55,419,502...55,456,698
JBrowse link
G Pithd1 PITH domain containing 1 ISO MGI:MGI:6416147 (MGI:MGI:6392185|PMID:31915251) RGD PMID:31915251 MGI:MGI:6392185 NCBI chr 5:154,322,562...154,333,080
Ensembl chr 5:154,322,551...154,332,940
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO MGI:MGI:1857562 (MGI:MGI:5461108|PMID:23001567)
(PMID:23001567)
RGD PMID:23001567 MGI:MGI:5461108 NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha ISO
IEA
(PMID:17565987)
GO_REF:0000107
RGD
Ensembl
PMID:17565987 GO_REF:0000107 NCBI chr19:25,095,089...25,118,869
Ensembl chr19:25,095,089...25,118,860
JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 ISO (PMID:18162577) RGD PMID:18162577 NCBI chr 3:47,578,449...47,673,330
Ensembl chr 3:47,578,384...47,673,338
JBrowse link
G Psme1 proteasome activator subunit 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:34,256,071...34,258,947
Ensembl chr15:34,256,071...34,258,947
JBrowse link
G Psme1-ps1 proteasome (prosome, macropain) activator subunit 1 (PA28 alpha), pseudogene 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:52,755,592...52,756,407
Ensembl chr17:52,755,621...52,756,367
JBrowse link
G Psme2 proteasome activator subunit 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:34,265,552...34,269,851
Ensembl chr15:34,265,557...34,269,851
JBrowse link
G Psme3 proteasome activator subunit 3 ISO
IBA
(PMID:18309296)
PMID:21873635
RGD PMID:18309296, PMID:21873635 RGD:13792537 NCBI chr10:89,236,256...89,244,041
Ensembl chr10:89,236,256...89,244,041
JBrowse link
G Rhbdf1 rhomboid 5 homolog 1 ISO
ISS
(PMID:21439629)
GO_REF:0000024
RGD
UniProt
PMID:21439629 GO_REF:0000024 NCBI chr10:15,672,370...15,685,285
Ensembl chr10:15,672,382...15,685,284
JBrowse link
G Tmf1 TATA element modulatory factor 1 ISO (MGI:MGI:5488886|PMID:16792503) RGD PMID:16792503 MGI:MGI:5488886 NCBI chr 4:129,521,986...129,546,024
Ensembl chr 4:129,521,991...129,544,506
JBrowse link
G Ubb ubiquitin B ISO (PMID:17571083) RGD PMID:17571083 NCBI chr10:48,880,231...48,881,896
Ensembl chr10:48,881,049...48,881,881
JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 ISO (PMID:18162577) RGD PMID:18162577 NCBI chr13:60,568,102...60,603,812
Ensembl chr13:60,545,635...60,603,811
JBrowse link
G Usp14 ubiquitin specific peptidase 14 ISO (PMID:18162577) RGD PMID:18162577 NCBI chr18:1,178,785...1,216,573
Ensembl chr18:1,178,787...1,216,409
JBrowse link
regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Araf A-Raf proto-oncogene, serine/threonine kinase ISO
ISS
(PMID:22609986)
GO_REF:0000024
RGD
UniProt
PMID:22609986 GO_REF:0000024 NCBI chr  X:1,369,534...1,391,603
Ensembl chr  X:1,379,194...1,390,873
JBrowse link
G Commd1 copper metabolism domain containing 1 ISO
IBA
(PMID:17183367)
PMID:21873635
RGD PMID:17183367, PMID:21873635 RGD:13792537 NCBI chr14:107,664,321...107,759,974
Ensembl chr14:107,664,255...107,760,191
JBrowse link
G Desi1 desumoylating isopeptidase 1 ISO (PMID:29666234) RGD PMID:29666234 NCBI chr 7:123,238,332...123,259,636
Ensembl chr 7:123,238,333...123,259,636
JBrowse link
G Foxf2 forkhead box F2 ISO (PMID:29374064) RGD PMID:29374064 NCBI chr17:34,150,417...34,156,450 JBrowse link
G Glmn glomulin, FKBP associated protein ISO (PMID:22405651) RGD PMID:22405651 NCBI chr14:3,204,390...3,247,703
Ensembl chr14:3,204,390...3,247,695
JBrowse link
G Gna12 G protein subunit alpha 12 ISO
ISS
(PMID:22609986)
GO_REF:0000024
(MGI:MGI:5448916|PMID:22609986)
RGD
UniProt
PMID:22609986 GO_REF:0000024, MGI:MGI:5448916 NCBI chr12:15,890,202...15,971,212
Ensembl chr12:15,890,170...15,971,212
JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein ISO (PMID:12643283) RGD PMID:12643283 NCBI chr19:25,949,488...25,956,677
Ensembl chr19:25,949,490...25,955,391
JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein ISO (PMID:19435460) RGD PMID:19435460 NCBI chr 5:72,103,704...72,141,701
Ensembl chr 5:72,103,704...72,141,700
JBrowse link
G Ube2k ubiquitin-conjugating enzyme E2K ISO MGI:MGI:3809822 (MGI:MGI:3806928|PMID:18710920) RGD PMID:18710920 MGI:MGI:3806928 NCBI chr14:44,289,247...44,348,691
Ensembl chr14:44,289,247...44,348,691
JBrowse link
G Ubqln4 ubiquilin 4 ISO (PMID:15280365), (PMID:27113755) RGD PMID:15280365, PMID:27113755 NCBI chr 2:187,915,701...187,931,035
Ensembl chr 2:187,915,751...187,931,035
JBrowse link
G Ufl1 Ufm1-specific ligase 1 ISO
IBA
(PMID:20228063)
PMID:21873635
RGD PMID:20228063, PMID:21873635 RGD:13792537 NCBI chr 5:39,616,479...39,650,894
Ensembl chr 5:39,615,956...39,650,895
JBrowse link
G Wnt10b Wnt family member 10B ISO MGI:MGI:3582610 (MGI:MGI:3820325|PMID:19056892) RGD PMID:19056892 MGI:MGI:3820325 NCBI chr 7:140,448,284...140,466,159
Ensembl chr 7:140,448,465...140,454,268
JBrowse link
G Xpo1 exportin 1 ISO (PMID:29666234) RGD PMID:29666234 NCBI chr14:108,007,421...108,049,088
Ensembl chr14:108,007,724...108,049,660
JBrowse link
regulation of protein catabolic process at postsynapse, modulating synaptic transmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh1 cadherin 1 IDA
IMP
PMID:21186356 SynGO PMID:21186356, PMID:21186356 RGD:13702406, RGD:13702406 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 ISO (MGI:MGI:5790738|PMID:26972007) RGD PMID:26972007 MGI:MGI:5790738 NCBI chr19:57,660,194...57,701,158
Ensembl chr19:57,662,278...57,699,113
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase IDA
IMP
PMID:21148011 SynGO PMID:21148011, PMID:21148011 RGD:13702142, RGD:13702142 NCBI chr 8:79,323,408...79,408,842
Ensembl chr 8:79,323,408...79,408,833
JBrowse link
G Psmc5 proteasome 26S subunit, ATPase 5 IC GO_REF:0000111 SynGO GO_REF:0000111 NCBI chr10:94,445,877...94,451,811
Ensembl chr10:94,445,877...94,451,811
JBrowse link
G Rnf19a ring finger protein 19A, RBR E3 ubiquitin protein ligase ISO (MGI:MGI:6100219|PMID:26553645) RGD PMID:26553645 MGI:MGI:6100219 NCBI chr 7:75,058,758...75,098,331
Ensembl chr 7:75,058,758...75,098,331
JBrowse link
G Usp8 ubiquitin specific peptidase 8 IDA
IMP
PMID:25505317 SynGO PMID:25505317, PMID:25505317 RGD:11076799, RGD:11076799 NCBI chr 3:119,173,818...119,222,499
Ensembl chr 3:119,173,818...119,222,484
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO (MGI:MGI:5790738|PMID:26972007) RGD PMID:26972007 MGI:MGI:5790738 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845
JBrowse link
regulation of protein catabolic process at presynapse, modulating synaptic transmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxl20 F-box and leucine-rich repeat protein 20 ISO (MGI:MGI:3765255|PMID:17803915) RGD PMID:17803915 MGI:MGI:3765255 NCBI chr10:86,036,745...86,099,699
Ensembl chr10:86,043,235...86,098,694
JBrowse link
G Plekhg5 pleckstrin homology and RhoGEF domain containing G5 IEA
ISO
GO_REF:0000107
(MGI:MGI:6099896|PMID:29084947)
Ensembl
RGD
PMID:29084947 GO_REF:0000107, MGI:MGI:6099896 NCBI chr 5:169,244,778...169,288,310
Ensembl chr 5:169,244,778...169,288,309
JBrowse link
G Rab26 RAB26, member RAS oncogene family ISO (PMID:29084947) RGD PMID:29084947 NCBI chr10:13,894,271...13,898,578
Ensembl chr10:13,893,290...13,898,855
JBrowse link
regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 ISO (PMID:28068668) RGD PMID:28068668 NCBI chr 1:1,784,078...1,817,310
Ensembl chr 1:1,784,078...1,817,310
JBrowse link
G Nub1 negative regulator of ubiquitin-like proteins 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:6,950,870...6,981,400
Ensembl chr 4:6,951,478...6,978,073
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO (PMID:19880522) RGD PMID:19880522 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link
G Ube3a ubiquitin protein ligase E3A ISO (PMID:24728990) RGD PMID:24728990 NCBI chr 1:116,586,901...116,678,161
Ensembl chr 1:116,587,815...116,679,973
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    metabolic process 12278
      regulation of metabolic process 6985
        regulation of catabolic process 915
          regulation of protein catabolic process 398
            negative regulation of protein catabolic process + 127
            positive regulation of protein catabolic process + 225
            regulation of cellular protein catabolic process + 254
            regulation of chaperone-mediated autophagy + 4
            regulation of elastin catabolic process + 1
            regulation of membrane protein ectodomain proteolysis + 23
            regulation of protein catabolic process at postsynapse, modulating synaptic transmission 7
            regulation of protein catabolic process at presynapse, modulating synaptic transmission 3
Path 2
Term Annotations click to browse term
  biological_process 20027
    metabolic process 12278
      organic substance metabolic process 11660
        macromolecule metabolic process 10098
          protein metabolic process 6264
            regulation of protein metabolic process 2990
              regulation of protein catabolic process 398
                negative regulation of protein catabolic process + 127
                positive regulation of protein catabolic process + 225
                regulation of cellular protein catabolic process + 254
                regulation of chaperone-mediated autophagy + 4
                regulation of elastin catabolic process + 1
                regulation of membrane protein ectodomain proteolysis + 23
                regulation of protein catabolic process at postsynapse, modulating synaptic transmission 7
                regulation of protein catabolic process at presynapse, modulating synaptic transmission 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.