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ONTOLOGY REPORT - ANNOTATIONS


Term:ribosome assembly
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Accession:GO:0042255 term browser browse the term
Definition:The aggregation, arrangement and bonding together of the mature ribosome and of its subunits.
Synonyms:narrow_synonym: ribosomal subunit assembly
 alt_id: GO:0042257


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ribosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhx29 DExH-box helicase 29 JBrowse link 2 44,787,066 44,837,834 RGD:1600115
RGD:1624291
G Eif2a eukaryotic translation initiation factor 2A JBrowse link 2 148,722,343 148,755,781 RGD:1624291
G Mrpl22 mitochondrial ribosomal protein L22 JBrowse link 10 43,601,786 43,612,119 RGD:13792537
G Mterf4 mitochondrial transcription termination factor 4 JBrowse link 9 100,440,482 100,445,158 RGD:1624291
G Nip7 nucleolar pre-rRNA processing protein NIP7 JBrowse link 19 39,257,586 39,259,728 RGD:1600115
90S preribosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rpl38 ribosomal protein L38 JBrowse link 10 103,198,424 103,202,059 RGD:1624291
mature ribosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C1qbp complement C1q binding protein JBrowse link 10 57,613,876 57,618,527 RGD:1624291
RGD:13792537
RGD:1600115
G Ddx3x DEAD-box helicase 3, X-linked JBrowse link X 10,400,363 10,414,010 RGD:1624291
G Efl1 elongation factor like GTPase 1 JBrowse link 1 144,601,425 144,740,634 RGD:1624291
RGD:13792537
G Eif6 eukaryotic translation initiation factor 6 JBrowse link 3 151,356,867 151,363,201 RGD:1624291
RGD:1600115
G Nsun4 NOP2/Sun RNA methyltransferase 4 JBrowse link 5 134,885,377 134,905,492 RGD:1624291
G Sbds SBDS, ribosome maturation factor JBrowse link 12 29,921,443 29,930,602 RGD:1624291
RGD:1600115
mitochondrial large ribosomal subunit assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddx28 DEAD-box helicase 28 JBrowse link 19 37,988,423 37,990,353 RGD:1624291
RGD:13792537
G Dhx30 DExH-box helicase 30 JBrowse link 8 118,160,315 118,194,674 RGD:1624291
RGD:1600115
G Fastkd2 FAST kinase domains 2 JBrowse link 9 70,448,386 70,471,420 RGD:1624291
RGD:1600115
mitochondrial ribosome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mpv17l2 MPV17 mitochondrial inner membrane protein like 2 JBrowse link 16 20,432,734 20,435,125 RGD:1624291
RGD:13792537
G Mrps2 mitochondrial ribosomal protein S2 JBrowse link 3 7,051,695 7,056,726 RGD:1624291
G Mterf3 mitochondrial transcription termination factor 3 JBrowse link 7 71,275,544 71,293,842 RGD:13792537
G Mterf4 mitochondrial transcription termination factor 4 JBrowse link 9 100,440,482 100,445,158 RGD:13792537
ribosomal large subunit assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07021384.1 RGD:13792537
G AABR07061158.1 RGD:13792537
G AABR07064667.1 RGD:13792537
G AABR07070060.2 RGD:13792537
G AC120310.1 RGD:13792537
G AC123138.1 RGD:13792537
G Bop1 BOP1 ribosomal biogenesis factor JBrowse link 7 117,514,529 117,538,342 RGD:1624291
G Brix1 biogenesis of ribosomes BRX1 JBrowse link 2 60,450,547 60,461,425 RGD:13792537
G LOC102555453 60S ribosomal protein L12-like JBrowse link X 1,345,540 1,346,244 RGD:13792537
G LOC689899 similar to 60S ribosomal protein L23a JBrowse link 14 24,129,598 24,130,134 RGD:13792537
G Mdn1 midasin AAA ATPase 1 JBrowse link 5 47,894,526 48,036,071 RGD:1600115
G mrpl11 mitochondrial ribosomal protein L11 JBrowse link 1 220,243,469 220,246,340 RGD:13792537
G Mrpl20 mitochondrial ribosomal protein L20 JBrowse link 5 173,248,245 173,252,775 RGD:13792537
G Mrto4 MRT4 homolog, ribosome maturation factor JBrowse link 5 157,814,142 157,820,889 RGD:1600115
G Nle1 notchless homolog 1 JBrowse link 10 70,250,959 70,261,880 RGD:13792537
G Nop2 NOP2 nucleolar protein JBrowse link 4 157,646,759 157,658,502 RGD:1624291
G Nop53 NOP53 ribosome biogenesis factor JBrowse link 1 77,836,522 77,843,991 RGD:1624291
RGD:13792537
G Ppan peter pan homolog JBrowse link 8 21,905,865 21,909,845 RGD:13792537
G RGD1560821 similar to small nuclear ribonucleoparticle-associated protein JBrowse link X 77,885,562 77,886,179 RGD:13792537
G RGD1564606 similar to 60S ribosomal protein L23a JBrowse link 2 38,230,697 38,231,287 RGD:13792537
G Rpf2 ribosome production factor 2 homolog JBrowse link 20 45,321,381 45,342,865 RGD:13792537
G Rpl10 ribosomal protein L10 JBrowse link X 156,438,251 156,440,461 RGD:13792537
G Rpl10l ribosomal protein L10-like JBrowse link 6 88,231,273 88,232,549 RGD:13792537
G Rpl11 ribosomal protein L11 JBrowse link 5 154,390,809 154,394,412 RGD:1624291
RGD:1600115
RGD:13792537
G Rpl12 ribosomal protein L12 JBrowse link 3 12,009,578 12,011,952 RGD:13792537
G Rpl23a ribosomal protein L23a JBrowse link 10 65,441,295 65,443,981 RGD:13792537
G Rpl24 ribosomal protein L24 JBrowse link 11 47,116,885 47,122,093 RGD:1624291
RGD:13792537
G Rpl3 ribosomal protein L3 JBrowse link 7 121,297,365 121,302,739 RGD:13792537
G Rpl3l ribosomal protein L3-like JBrowse link 10 14,094,769 14,105,312 RGD:13792537
G Rpl5 ribosomal protein L5 JBrowse link 14 2,860,963 2,867,397 RGD:1624291
RGD:13792537
G Rpl6 ribosomal protein L6 JBrowse link 12 40,877,578 40,882,032 RGD:13792537
G Rplp0 ribosomal protein lateral stalk subunit P0 JBrowse link 12 46,791,528 46,794,797 RGD:13792537
G Rplp0l1 ribosomal protein lateral stalk subunit P0 like 1 JBrowse link 2 206,902,776 206,903,920 RGD:13792537
G Rrs1 ribosome biogenesis regulator 1 homolog JBrowse link 5 9,430,710 9,432,343 RGD:1624291
RGD:1600115
G Rsl24d1 ribosomal L24 domain containing 1 JBrowse link 8 79,792,587 79,801,592 RGD:13792537
ribosomal small subunit assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07005506.1 RGD:13792537
G AABR07005886.1 RGD:13792537
G AABR07040944.1 RGD:13792537
G AABR07056611.1 RGD:13792537
G AC117101.1 RGD:13792537
G Eral1 Era-like 12S mitochondrial rRNA chaperone 1 JBrowse link 10 65,272,849 65,291,070 RGD:1600115
RGD:13792537
RGD:1624291
G LOC100359503 ribosomal protein S28-like JBrowse link 16 70,644,459 70,644,750 RGD:13792537
G LOC100362339 ribosomal protein S19-like JBrowse link 17 54,057,935 54,058,462 RGD:13792537
G LOC100362987 ribosomal protein S27-like JBrowse link 9 10,737,524 10,737,845 RGD:13792537
G LOC100911847 40S ribosomal protein S14-like JBrowse link 5 144,083,030 144,083,602 RGD:13792537
G LOC103690015 40S ribosomal protein S19-like JBrowse link 1 77,541,352 77,541,835 RGD:13792537
G LOC500594 LRRGT00162 JBrowse link 5 169,632,527 169,637,356 RGD:13792537
G LOC502176 hypothetical protein LOC502176 JBrowse link 18 60,729,517 60,767,280 RGD:13792537
G Mrps11 mitochondrial ribosomal protein S11 JBrowse link 1 140,477,645 140,487,249 RGD:13792537
G Mrps7 mitochondrial ribosomal protein S7 JBrowse link 10 104,155,805 104,158,840 RGD:13792537
G Pwp2 PWP2, small subunit processome component JBrowse link 20 11,228,892 11,243,204 RGD:13792537
G Rps10 ribosomal protein S10 JBrowse link 20 7,215,762 7,220,331 RGD:2299075
RGD:13792537
G Rps10l1 ribosomal protein S10-like 1 JBrowse link 6 75,429,715 75,430,282 RGD:13792537
G Rps14 ribosomal protein S14 JBrowse link 18 56,042,532 56,047,316 RGD:2299075
RGD:13792537
RGD:1600115
RGD:1624291
G Rps15 ribosomal protein S15 JBrowse link 7 12,282,134 12,283,573 RGD:2299075
RGD:13792537
G Rps19 ribosomal protein S19 JBrowse link 1 81,750,873 81,756,629 RGD:1624291
RGD:13792537
G Rps19l2 ribosomal protein S19-like2 JBrowse link 9 16,802,280 16,807,982 RGD:13792537
G Rps2 ribosomal protein S2 JBrowse link 10 14,088,171 14,090,020 RGD:2299075
G Rps25 ribosomal protein s25 JBrowse link 8 48,727,346 48,729,722 RGD:2299075
G Rps27 ribosomal protein S27 JBrowse link 2 189,572,175 189,573,280 RGD:13792537
G Rps27l ribosomal protein S27-like JBrowse link 8 72,741,155 72,746,090 RGD:13792537
G Rps28 ribosomal protein S28 JBrowse link 7 18,682,071 18,683,440 RGD:13792537
G Rps5 ribosomal protein S5 JBrowse link 1 65,660,470 65,664,767 RGD:13792537
G Rps6 ribosomal protein S6 JBrowse link 5 105,197,821 105,200,681 RGD:2299075
G Rpsa ribosomal protein SA JBrowse link 8 128,806,053 128,809,987 RGD:13792537
G Rrp7a ribosomal RNA processing 7 homolog A JBrowse link 7 123,980,251 123,990,139 RGD:13792537
small-subunit processome assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abt1 activator of basal transcription 1 JBrowse link 17 43,946,118 43,948,224 RGD:13792537

Term paths to the root
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  biological_process 19336
    cellular component organization or biogenesis 6442
      cellular component biogenesis 3052
        ribonucleoprotein complex biogenesis 477
          ribosome biogenesis 344
            ribosome assembly 85
              mature ribosome assembly 6
              mitochondrial ribosome assembly + 7
              ribosomal large subunit assembly + 39
              ribosomal small subunit assembly + 33
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.