Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:fat-soluble vitamin biosynthetic process
go back to main search page
Accession:GO:0042362 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of any of a diverse group of vitamins that are soluble in organic solvents and relatively insoluble in water.
Synonyms:exact_synonym: fat-soluble vitamin anabolism;   fat-soluble vitamin biosynthesis;   fat-soluble vitamin formation;   fat-soluble vitamin synthesis


GViewer not supported for chinchilla.
show annotations for term's descendants           Sort by:
 
calcitriol biosynthetic process from calciol term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102004889 sterol 26-hydroxylase, mitochondrial ISO (PMID:15465040) UniProt PMID:15465040 NCBI chrNW_004955453:14,601,495...14,647,383 JBrowse link
G LOC102011841 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial ISO (MGI:MGI:3590419|PMID:15972816)
(PMID:15795327), (PMID:16549446), (PMID:17023519), (PMID:22862690), (PMID:9415400)
UniProt PMID:9415400, PMID:15795327, PMID:15972816, PMID:16549446, PMID:17023519, PMID:22862690 MGI:MGI:3590419 NCBI chrNW_004955458:5,472,404...5,477,001 JBrowse link
G LOC102024786 vitamin D 25-hydroxylase ISO (PMID:15465040), (PMID:18511070) UniProt PMID:15465040, PMID:18511070 NCBI chrNW_004955414:29,929,130...29,948,151 JBrowse link
negative regulation of calcidiol 1-monooxygenase activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfi1 growth factor independent 1 transcriptional repressor ISO (PMID:15947108) BHF-UCL PMID:15947108 NCBI chrNW_004955423:2,024,084...2,032,530 JBrowse link
G LOC102011841 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial ISO (PMID:16549446) BHF-UCL PMID:16549446 NCBI chrNW_004955458:5,472,404...5,477,001 JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 ISO (PMID:15243130) BHF-UCL PMID:15243130 NCBI chrNW_004955496:5,842,734...5,950,995 JBrowse link
negative regulation of vitamin D biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snai1 snail family transcriptional repressor 1 ISO (PMID:19502595) BHF-UCL PMID:19502595 NCBI chrNW_004955445:8,232,084...8,237,893 JBrowse link
G Snai2 snail family transcriptional repressor 2 ISO (PMID:18485278), (PMID:19502595) BHF-UCL PMID:18485278, PMID:19502595 NCBI chrNW_004955454:8,759,860...8,763,603 JBrowse link
positive regulation of calcidiol 1-monooxygenase activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifng interferon gamma ISO (PMID:9282826) BHF-UCL PMID:9282826 NCBI chrNW_004955458:14,643,333...14,648,020 JBrowse link
G Il1b interleukin 1 beta ISO (PMID:16720713), (PMID:17023519) BHF-UCL PMID:16720713, PMID:17023519 NCBI chrNW_004955470:1,486,936...1,491,888 JBrowse link
G Tnf tumor necrosis factor ISO (PMID:1690216) BHF-UCL PMID:1690216 NCBI chrNW_004955437:117,267...119,899 JBrowse link
positive regulation of vitamin D biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifng interferon gamma ISO (PMID:9282826) BHF-UCL PMID:9282826 NCBI chrNW_004955458:14,643,333...14,648,020 JBrowse link
G Tnf tumor necrosis factor ISO (PMID:1690216) BHF-UCL PMID:1690216 NCBI chrNW_004955437:117,267...119,899 JBrowse link
regulation of calcidiol 1-monooxygenase activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vdr vitamin D receptor ISO (MGI:MGI:1097206|PMID:9295274) BHF-UCL PMID:9295274 MGI:MGI:1097206 NCBI chrNW_004955500:6,745,725...6,798,052 JBrowse link
vitamin E biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pltp phospholipid transfer protein ISO (MGI:MGI:3622506|PMID:16467369) MGI PMID:16467369 MGI:MGI:3622506 NCBI chrNW_004955445:11,384,723...11,399,217 JBrowse link
vitamin K biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ubiad1 UbiA prenyltransferase domain containing 1 ISO (PMID:23169578)
(PMID:20953171)
UniProtKB PMID:20953171, PMID:23169578 NCBI chrNW_004955486:2,472,035...2,481,975 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11857
    metabolic process 7593
      small molecule metabolic process 1234
        vitamin metabolic process 55
          fat-soluble vitamin metabolic process 29
            fat-soluble vitamin biosynthetic process 13
              vitamin A biosynthetic process 0
              vitamin D biosynthetic process + 11
              vitamin E biosynthetic process + 1
              vitamin K biosynthetic process 1
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.