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ONTOLOGY REPORT - ANNOTATIONS


Term:histone binding
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Accession:GO:0042393 term browser browse the term
Definition:Interacting selectively and non-covalently with a histone, any of a group of water-soluble proteins found in association with the DNA of eukaroytic chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity.
Synonyms:related_synonym: histone-specific chaperone activity


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histone binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07007744.2 RGD:13792537
G AABR07041089.1 RGD:13792537
G AABR07055527.1 RGD:13792537
G AC112018.1 RGD:13792537
G Aire autoimmune regulator JBrowse link 20 11,365,630 11,380,636 RGD:1624291
RGD:13792537
G Anp32a acidic nuclear phosphoprotein 32 family member A JBrowse link 8 67,295,578 67,333,075 RGD:13792537
G Anp32b acidic nuclear phosphoprotein 32 family member B JBrowse link 5 62,070,709 62,094,633 RGD:1600115
RGD:13792537
RGD:1624291
G Anp32e acidic nuclear phosphoprotein 32 family member E JBrowse link 2 198,040,573 198,057,005 RGD:1624291
RGD:13792537
RGD:1600115
G Apbb1 amyloid beta precursor protein binding family B member 1 JBrowse link 1 170,387,625 170,411,263 RGD:1624291
G Asf1a anti-silencing function 1A histone chaperone JBrowse link 20 34,894,419 34,909,265 RGD:1624291
G Asf1b anti-silencing function 1B histone chaperone JBrowse link 19 25,077,918 25,092,491 RGD:1624291
G Atad2 ATPase family, AAA domain containing 2 JBrowse link 7 97,984,754 98,027,379 RGD:13792537
G Atad2b ATPase family, AAA domain containing 2B JBrowse link 6 28,998,080 29,066,850 RGD:13792537
G Atrx ATRX, chromatin remodeler JBrowse link X 76,820,110 76,979,155 RGD:1600115
RGD:1624291
G Baz1b bromodomain adjacent to zinc finger domain, 1B JBrowse link 12 24,478,882 24,536,851 RGD:1624291
G Baz2a bromodomain adjacent to zinc finger domain, 2A JBrowse link 7 2,518,267 2,548,840 RGD:1624291
G Bcas3 BCAS3, microtubule associated cell migration factor JBrowse link 10 72,756,548 73,271,851 RGD:1624291
G Brd1 bromodomain containing 1 JBrowse link 7 129,676,119 129,724,303 RGD:1624291
G Brd7 bromodomain containing 7 JBrowse link 19 19,672,780 19,701,484 RGD:1624291
G Brdt bromodomain testis associated JBrowse link 14 3,437,876 3,462,613 RGD:1624291
G Cd1d1 CD1d1 molecule JBrowse link 2 186,330,298 186,333,805 RGD:1624291
G Chd2 chromodomain helicase DNA binding protein 2 JBrowse link 1 134,757,934 134,873,053 RGD:1624291
G Chd8 chromodomain helicase DNA binding protein 8 JBrowse link 15 28,612,932 28,672,574 RGD:1600115
RGD:1624291
G Cks1b CDC28 protein kinase regulatory subunit 1B JBrowse link 2 188,740,564 188,745,144 RGD:13792537
G Cks2 CDC28 protein kinase regulatory subunit 2 JBrowse link 17 13,587,664 13,593,423 RGD:13792537
G Coprs coordinator of PRMT5 and differentiation stimulator JBrowse link 16 80,826,681 80,831,791 RGD:1624291
RGD:13792537
G Ctcfl CCCTC-binding factor like JBrowse link 3 171,145,203 171,168,375 RGD:1624291
G Ctsl cathepsin L JBrowse link 17 1,873,105 1,879,266 RGD:1624291
G Daxx death-domain associated protein JBrowse link 20 5,480,103 5,485,962 RGD:1624291
RGD:13792537
RGD:1600115
G Dek DEK proto-oncogene JBrowse link 17 17,965,872 17,987,836 RGD:1624291
RGD:13792537
G Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 JBrowse link 4 9,881,505 9,908,693 RGD:1624291
RGD:1600115
G Dpf1 double PHD fingers 1 JBrowse link 1 87,248,448 87,258,070 RGD:13792537
G Dpf2 double PHD fingers 2 JBrowse link 1 221,253,764 221,269,043 RGD:13792537
G Dpf3 double PHD fingers 3 JBrowse link 6 106,660,569 106,971,310 RGD:13792537
G Dtx3l deltex E3 ubiquitin ligase 3L JBrowse link 11
11
67,758,093
67,768,542
67,767,623
67,772,428
RGD:1624291
G Fh fumarate hydratase JBrowse link 13 93,651,486 93,677,371 RGD:1624291
G Gk glycerol kinase JBrowse link X 54,227,291 54,303,897 RGD:2302223
G Glyr1 glyoxylate reductase 1 homolog JBrowse link 10 10,725,830 10,759,471 RGD:1624291
RGD:1600115
G Grwd1 glutamate-rich WD repeat containing 1 JBrowse link 1 101,813,356 101,819,058 RGD:1600115
RGD:1624291
G H2ax H2A.X variant histone JBrowse link 8 48,665,652 48,666,981 RGD:1624291
G H2bc1 H2B clustered histone 1 JBrowse link 17 43,423,111 43,423,580 RGD:1624291
G Hat1 histone acetyltransferase 1 JBrowse link 3 58,022,395 58,070,067 RGD:1600115
G Hils1 histone linker H1 domain, spermatid-specific 1 JBrowse link 10 82,775,691 82,776,487 RGD:1624291
G Hinfp histone H4 transcription factor JBrowse link 8 48,626,398 48,638,012 RGD:1624291
G Hjurp Holliday junction recognition protein JBrowse link 9 95,347,739 95,362,228 RGD:1624291
G Hpf1 histone PARylation factor 1 JBrowse link 16 32,524,128 32,540,233 RGD:1624291
RGD:13792537
G Ino80 INO80 complex ATPase subunit JBrowse link 3 111,186,371 111,266,542 RGD:13792537
G Ipo7 importin 7 JBrowse link 1 174,655,939 174,696,173 RGD:1624291
G Ipo9 importin 9 JBrowse link 13 52,203,384 52,256,196 RGD:1624291
G Jak2 Janus kinase 2 JBrowse link 1 247,398,667 247,457,521 RGD:1624291
RGD:1600115
G Kat5 lysine acetyltransferase 5 JBrowse link 1 220,967,795 220,974,596 RGD:13792537
G Kat6a lysine acetyltransferase 6A JBrowse link 16 73,942,669 74,020,750 RGD:13792537
G Kat7 lysine acetyltransferase 7 JBrowse link 10 83,095,067 83,128,342 RGD:13792537
G Kat8 lysine acetyltransferase 8 JBrowse link 1 199,360,645 199,372,925 RGD:13792537
G Kdm1b lysine demethylase 1B JBrowse link 17 17,987,972 18,028,808 RGD:1624291
G Kdm5a lysine demethylase 5A JBrowse link 4 152,892,388 152,972,196 RGD:1624291
G Kdm5b lysine demethylase 5B JBrowse link 13 51,384,371 51,455,392 RGD:1624291
G Kmt5c lysine methyltransferase 5C JBrowse link 1 72,666,662 72,674,271 RGD:1600115
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 JBrowse link 3 159,316,580 159,348,914 RGD:1624291
G L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 JBrowse link 7 122,896,860 122,918,025 RGD:1624291
G Lef1 lymphoid enhancer binding factor 1 JBrowse link 2 236,232,115 236,345,061 RGD:1600115
RGD:1624291
G Mcm2 minichromosome maintenance complex component 2 JBrowse link 4 120,825,699 120,840,221 RGD:1624291
G Mcm3ap minichromosome maintenance complex component 3 associated protein JBrowse link 20 12,879,304 12,917,069 RGD:1624291
G Mllt10 MLLT10, histone lysine methyltransferase DOT1L cofactor JBrowse link 17 84,847,660 84,981,134 RGD:1624291
G Mllt3 MLLT3, super elongation complex subunit JBrowse link 5 106,103,498 106,202,559 RGD:1624291
G Mllt6 MLLT6, PHD finger containing JBrowse link 10 85,607,988 85,628,171 RGD:1624291
G Morc2 MORC family CW-type zinc finger 2 JBrowse link 14 83,889,138 83,930,263 RGD:1624291
G Mysm1 myb-like, SWIRM and MPN domains 1 JBrowse link 5 113,902,115 113,939,083 RGD:1624291
RGD:13792537
G Nap1l2 nucleosome assembly protein 1-like 2 JBrowse link X 73,997,274 73,999,677 RGD:1624291
G Nasp nuclear autoantigenic sperm protein JBrowse link 5 135,446,485 135,472,113 RGD:1624291
RGD:13792537
RGD:1600115
G Ncapd2 non-SMC condensin I complex, subunit D2 JBrowse link 4 157,682,855 157,705,903 RGD:1624291
RGD:13792537
G Ncapd3 non-SMC condensin II complex, subunit D3 JBrowse link 8 28,075,629 28,145,024 RGD:13792537
G Ncl nucleolin JBrowse link 9 93,369,119 93,377,643 RGD:9686387
G Noc2l NOC2-like nucleolar associated transcriptional repressor JBrowse link 5 173,659,796 173,672,699 RGD:1624291
RGD:13792537
G Npm1 nucleophosmin 1 JBrowse link 10 18,080,949 18,091,062 RGD:1624291
RGD:13792537
G Npm2 nucleophosmin/nucleoplasmin 2 JBrowse link 15 52,337,457 52,345,849 RGD:13792537
G Npm3 nucleophosmin/nucleoplasmin, 3 JBrowse link 1 265,504,105 265,506,080 RGD:13792537
G Parp9 poly (ADP-ribose) polymerase family, member 9 JBrowse link 11 67,724,071 67,758,027 RGD:1624291
G Phf10 PHD finger protein 10 JBrowse link 1 56,951,516 56,967,893 RGD:13792537
G Phf6 PHD finger protein 6 JBrowse link X 158,698,353 158,739,855 RGD:1624291
G Pih1d1 PIH1 domain containing 1 JBrowse link 1 101,151,240 101,156,806 RGD:1624291
G Pkn1 protein kinase N1 JBrowse link 19 24,803,524 24,832,305 RGD:1624291
RGD:1600115
G Prkcb protein kinase C, beta JBrowse link 1 192,233,569 192,575,339 RGD:1624291
RGD:1600115
G Prmt6 protein arginine methyltransferase 6 JBrowse link 2 213,173,403 213,180,721 RGD:1624291
G Ptma prothymosin alpha JBrowse link 9 93,545,396 93,549,436 RGD:1624291
G Pwwp2a PWWP domain containing 2A JBrowse link 10 29,288,060 29,335,425 RGD:1624291
G Pygo2 pygopus family PHD finger 2 JBrowse link 2 188,757,167 188,762,285 RGD:1624291
G Rag1 recombination activating 1 JBrowse link 3 91,206,394 91,217,491 RGD:1624291
G Rcc1 regulator of chromosome condensation 1 JBrowse link 5 150,508,840 150,531,062 RGD:1624291
G Rnf168 ring finger protein 168 JBrowse link 11 71,721,242 71,743,421 RGD:1600115
RGD:1624291
G Rnf20 ring finger protein 20 JBrowse link 5 64,892,996 64,920,397 RGD:1624291
G Rnf8 ring finger protein 8 JBrowse link 20 8,285,380 8,309,858 RGD:1624291
RGD:13792537
RGD:1600115
G Rsf1 remodeling and spacing factor 1 JBrowse link 1 162,549,222 162,671,962 RGD:1624291
RGD:13792537
G Sap30l SAP30-like JBrowse link 10 43,224,151 43,231,864 RGD:1624291
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein JBrowse link 12 48,628,198 48,656,096 RGD:1624291
G Sbno1 strawberry notch homolog 1 JBrowse link 12 37,593,692 37,650,761 RGD:13792537
G Sbno2 strawberry notch homolog 2 JBrowse link 7 12,471,805 12,515,700 RGD:13792537
G Sfmbt1 Scm-like with four mbt domains 1 JBrowse link 16 6,775,648 6,896,155 RGD:1600115
RGD:1624291
G Sfmbt2 Scm-like with four mbt domains 2 JBrowse link 17 71,719,012 71,904,303 RGD:1624291
G Sirt1 sirtuin 1 JBrowse link 20 26,831,971 26,851,587 RGD:1624291
RGD:1600115
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 JBrowse link 1 244,615,811 244,783,736 RGD:1600115
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 JBrowse link 19 30,936,703 30,969,454 RGD:1624291
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 JBrowse link 8 118,206,678 118,326,264 RGD:13792537
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 JBrowse link 7 2,875,898 2,905,463 RGD:13792537
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
G Spty2d1 SPT2 chromatin protein domain containing 1 JBrowse link 1 103,115,280 103,129,438 RGD:1624291
RGD:13792537
G Srcap Snf2-related CREBBP activator protein JBrowse link 1 198,957,764 199,007,576 RGD:13792537
G Ssrp1 structure specific recognition protein 1 JBrowse link 3 72,447,516 72,457,621 RGD:13792537
G Stat1 signal transducer and activator of transcription 1 JBrowse link 9 54,287,540 54,327,958 RGD:1624291
G Stpg4 sperm-tail PG-rich repeat containing 4 JBrowse link 6 11,014,596 11,063,509 RGD:1624291
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor JBrowse link 10 65,470,470 65,507,581 RGD:1624291
RGD:13792537
G Tbl1x transducin (beta)-like 1 X-linked JBrowse link X 44,959,883 44,988,551 RGD:1624291
G Tbl1xr1 TBL1X receptor 1 JBrowse link 2 107,221,913 107,359,229 RGD:1624291
G Tnks tankyrase JBrowse link 16 60,925,093 61,067,192 RGD:1624291
G Tonsl tonsoku-like, DNA repair protein JBrowse link 7 117,688,397 117,703,139 RGD:1600115
RGD:1624291
G Tp53bp1 tumor protein p53 binding protein 1 JBrowse link 3 113,160,030 113,259,701 RGD:13792537
G Tspy1 testis specific protein, Y-linked 1 JBrowse link Y 151,941 156,587 RGD:2315448
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 JBrowse link 9 10,738,211 10,758,403 RGD:1624291
RGD:1600115
G Uhrf2 ubiquitin like with PHD and ring finger domains 2 JBrowse link 1 248,228,496 248,291,984 RGD:1624291
G Uimc1 ubiquitin interaction motif containing 1 JBrowse link 17 10,061,915 10,130,921 RGD:1600115
RGD:13792537
RGD:1624291
G Usp16 ubiquitin specific peptidase 16 JBrowse link 11 27,101,213 27,130,345 RGD:1624291
RGD:1600115
G Usp3 ubiquitin specific peptidase 3 JBrowse link 8 72,207,970 72,284,871 RGD:1624291
G Usp49 ubiquitin specific peptidase 49 JBrowse link 9 15,314,875 15,375,365 RGD:1624291
G Usp51 ubiquitin specific peptidase 51 JBrowse link X 19,268,352 19,273,753 RGD:1624291
G Vps72 vacuolar protein sorting 72 homolog JBrowse link 2 196,277,961 196,289,549 RGD:1624291
G Wdr5 WD repeat domain 5 JBrowse link 3 6,061,892 6,080,724 RGD:13792537
G Wdr5b WD repeat domain 5B JBrowse link 11 67,645,959 67,647,818 RGD:13792537
G Wdtc1 WD and tetratricopeptide repeats 1 JBrowse link 5 151,487,572 151,536,829 RGD:1624291
G Wrap53 WD repeat containing, antisense to TP53 JBrowse link 10 56,169,024 56,185,800 RGD:1624291
G Yeats2 YEATS domain containing 2 JBrowse link 11 84,330,064 84,595,296 RGD:1624291
G Zmynd11 zinc finger, MYND-type containing 11 JBrowse link 17 63,825,616 63,914,740 RGD:1624291
H3K27me3 modified histone binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chd5 chromodomain helicase DNA binding protein 5 JBrowse link 5 169,519,212 169,572,059 RGD:1600115
RGD:1624291
G Taf1 TATA-box binding protein associated factor 1 JBrowse link X 71,412,291 71,486,456 RGD:1624291
G Taf7 TATA-box binding protein associated factor 7 JBrowse link 18 30,779,149 30,781,297 RGD:1624291
H3K9me3 modified histone binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dpf2 double PHD fingers 2 JBrowse link 1 221,253,764 221,269,043 RGD:1624291
H4K20me3 modified histone binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pwp1 PWP1 homolog, endonuclein JBrowse link 7 23,988,776 24,004,774 RGD:1624291
G Ttll12 tubulin tyrosine ligase like 12 JBrowse link 7 124,472,758 124,491,004 RGD:1624291
lysine-acetylated histone binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atad2b ATPase family, AAA domain containing 2B JBrowse link 6 28,998,080 29,066,850 RGD:1624291
G Baz2a bromodomain adjacent to zinc finger domain, 2A JBrowse link 7 2,518,267 2,548,840 RGD:1624291
G Brd2 bromodomain containing 2 JBrowse link 20 3,910,555 3,921,074 RGD:1624291
RGD:1600115
G Brd3 bromodomain containing 3 JBrowse link 3 5,995,204 6,054,467 RGD:1624291
G Brd4 bromodomain containing 4 JBrowse link 7 14,222,101 14,303,055 RGD:1624291
G Brd7 bromodomain containing 7 JBrowse link 19 19,672,780 19,701,484 RGD:1624291
G Brd9 bromodomain containing 9 JBrowse link 1 31,939,612 31,968,120 RGD:1624291
G Brdt bromodomain testis associated JBrowse link 14 3,437,876 3,462,613 RGD:1624291
RGD:1600115
G Carm1 coactivator-associated arginine methyltransferase 1 JBrowse link 8 22,577,723 22,622,555 RGD:1624291
RGD:1600115
G Dpf2 double PHD fingers 2 JBrowse link 1 221,253,764 221,269,043 RGD:1624291
G Kmt2a lysine methyltransferase 2A JBrowse link 8 49,110,407 49,185,872 RGD:1624291
G LOC108348112 bromodomain-containing protein 2 JBrowse link 20 5,262,742 5,269,337 RGD:1600115
G Mllt3 MLLT3, super elongation complex subunit JBrowse link 5 106,103,498 106,202,559 RGD:1624291
G Phip pleckstrin homology domain interacting protein JBrowse link 8 90,387,339 90,483,964 RGD:1624291
G Psme4 proteasome activator subunit 4 JBrowse link 14 115,166,165 115,269,041 RGD:1624291
RGD:13792537
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 8 22,648,323 22,739,468 RGD:1624291
RGD:1600115
G Taf1 TATA-box binding protein associated factor 1 JBrowse link X 71,412,291 71,486,456 RGD:1624291
G Trim24 tripartite motif-containing 24 JBrowse link 4 65,632,278 65,684,746 RGD:1624291
G Zmynd8 zinc finger, MYND-type containing 8 JBrowse link 3 162,480,766 162,594,145 RGD:1624291
methylated histone binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07006823.1 RGD:13792537
G AABR07010919.1 RGD:13792537
G AABR07012658.1 RGD:13792537
G AABR07015759.1 RGD:1600115
G AABR07016166.1 RGD:13792537
G AABR07016310.1 RGD:13792537
G AABR07017902.2 RGD:1600115
G AABR07026842.1 RGD:13792537
G AABR07027088.1 RGD:13792537
G AABR07036101.1 RGD:13792537
G AABR07036187.1 RGD:13792537
G AABR07049437.1 RGD:13792537
G AABR07050637.1 RGD:13792537
G AABR07057787.1 RGD:13792537
G AABR07058017.1 RGD:13792537
G AABR07061556.1 RGD:13792537
G AABR07061871.1 RGD:13792537
G Atrx ATRX, chromatin remodeler JBrowse link X 76,820,110 76,979,155 RGD:1600115
RGD:1624291
G Cbx2 chromobox 2 JBrowse link 10 108,132,105 108,140,935 RGD:1624291
G Cbx4 chromobox 4 JBrowse link 10 108,190,947 108,196,455 RGD:1624291
G Cbx5 chromobox 5 JBrowse link 7 144,819,673 144,865,014 RGD:1624291
G Cbx7 chromobox 7 JBrowse link 7 121,136,067 121,153,503 RGD:1624291
G Cbx8 chromobox 8 JBrowse link 10 108,148,073 108,150,511 RGD:1624291
G Cdyl chromodomain Y-like JBrowse link 17 29,672,925 29,895,416 RGD:1624291
RGD:1600115
G Cdyl2 chromodomain Y-like 2 JBrowse link 19 49,087,131 49,222,528 RGD:1624291
G Chd1 chromodomain helicase DNA binding protein 1 JBrowse link 1 57,692,828 57,756,762 RGD:1624291
G Chd8 chromodomain helicase DNA binding protein 8 JBrowse link 15 28,612,932 28,672,574 RGD:1624291
RGD:1600115
G Cxxc1 CXXC finger protein 1 JBrowse link 18 70,192,520 70,197,871 RGD:1624291
RGD:1600115
G Dppa3 developmental pluripotency-associated 3 JBrowse link 4 155,437,675 155,441,059 RGD:1624291
RGD:13792537
RGD:1600115
G Dppa3l1 developmental pluripotency associated 3-like 1 JBrowse link 8 60,683,180 60,683,658 RGD:13792537
G Fam156b family with sequence similarity 156, member B JBrowse link X 20,804,902 20,809,295 RGD:1600115
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:1600115
RGD:1624291
G Glyr1 glyoxylate reductase 1 homolog JBrowse link 10 10,725,830 10,759,471 RGD:1624291
RGD:13792537
RGD:1600115
G Ing1 inhibitor of growth family, member 1 JBrowse link 16 83,277,055 83,278,120 RGD:1624291
RGD:13792537
G Ing2 inhibitor of growth family, member 2 JBrowse link 16 47,714,756 47,725,836 RGD:1624291
RGD:13792537
G Ing3 inhibitor of growth family, member 3 JBrowse link 4 49,017,235 49,044,450 RGD:1624291
G Ing4 inhibitor of growth family, member 4 JBrowse link 4 157,554,729 157,563,353 RGD:1624291
RGD:13792537
G Ing5 inhibitor of growth family, member 5 JBrowse link 9 100,932,932 100,950,233 RGD:1624291
RGD:13792537
G Jmjd7 jumonji domain containing 7 JBrowse link 3 111,818,150 111,824,211 RGD:1624291
G Kat8 lysine acetyltransferase 8 JBrowse link 1 199,360,645 199,372,925 RGD:1624291
G Kdm4a lysine demethylase 4A JBrowse link 5 136,967,650 137,014,402 RGD:1624291
G Kdm5a lysine demethylase 5A JBrowse link 4 152,892,388 152,972,196 RGD:1624291
G Kdm7a lysine demethylase 7A JBrowse link 4 66,915,603 66,957,971 RGD:1624291
RGD:1600115
G Kdm8 lysine demethylase 8 JBrowse link 1 196,838,460 196,854,192 RGD:1600115
RGD:1624291
G Kmt2e lysine methyltransferase 2E JBrowse link 4 8,187,751 8,255,578 RGD:1624291
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 JBrowse link 3 159,316,580 159,348,914 RGD:1600115
RGD:1624291
G L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 JBrowse link 7 122,896,860 122,918,025 RGD:1624291
RGD:1600115
G LOC100909485 spindlin-2-like JBrowse link X 18,340,413 18,342,492 RGD:1624291
RGD:13792537
G LOC103694624 Y-linked testis-specific protein 1-like RGD:13792537
G LOC103694730 Y-linked testis-specific protein 1-like RGD:13792537
G LOC103694745 Y-linked testis-specific protein 1-like RGD:13792537
G LOC103694747 Y-linked testis-specific protein 1-like RGD:13792537
G LOC103694776 Y-linked testis-specific protein 1-like RGD:13792537
G LOC108353376 Y-linked testis-specific protein 1-like RGD:13792537
G LOC108353386 Y-linked testis-specific protein 1-like RGD:13792537
G Lrwd1 leucine-rich repeats and WD repeat domain containing 1 JBrowse link 12 23,574,234 23,587,262 RGD:1624291
G Mbtd1 mbt domain containing 1 JBrowse link 10 81,588,233 81,645,532 RGD:1624291
G Mphosph8 M-phase phosphoprotein 8 JBrowse link 15 36,918,843 36,946,712 RGD:1624291
RGD:1600115
G Msh6 mutS homolog 6 JBrowse link 6 11,644,565 11,662,389 RGD:1624291
G Msl3 MSL complex subunit 3 JBrowse link X 27,015,826 27,033,562 RGD:1624291
G Mtf2 metal response element binding transcription factor 2 JBrowse link 14 2,656,776 2,701,027 RGD:1624291
RGD:13792537
G Ncapd3 non-SMC condensin II complex, subunit D3 JBrowse link 8 28,075,629 28,145,024 RGD:1624291
G Ncapg2 non-SMC condensin II complex, subunit G2 JBrowse link 6 144,291,313 144,362,454 RGD:1624291
G NEWGENE_1306210 spindlin 1 JBrowse link 17 14,078,821 14,103,338 RGD:1600115
RGD:13792537
G Phf1 PHD finger protein 1 JBrowse link 20 5,526,926 5,531,940 RGD:1624291
RGD:13792537
G Phf19 PHD finger protein 19 JBrowse link 3 13,957,136 13,978,283 RGD:1624291
RGD:13792537
G Phf2 PHD finger protein 2 JBrowse link 17 16,240,458 16,274,626 RGD:1624291
G Phf8 PHD finger protein 8 JBrowse link X 21,063,487 21,168,750 RGD:1624291
G Pygo1 pygopus family PHD finger 1 JBrowse link 8 79,607,013 79,625,188 RGD:1624291
G Rag2 recombination activating 2 JBrowse link 3 91,191,837 91,200,134 RGD:1624291
G Rbbp5 RB binding protein 5, histone lysine methyltransferase complex subunit JBrowse link 13 49,250,301 49,277,152 RGD:1624291
G Rrp8 ribosomal RNA processing 8 JBrowse link 1 170,574,670 170,578,693 RGD:1624291
RGD:13792537
RGD:1600115
G Sgf29 SAGA complex associated factor 29 JBrowse link 1 198,066,974 198,100,494 RGD:1600115
RGD:13792537
RGD:1624291
G Spin1 spindlin 1 JBrowse link 16 884,854 930,527 RGD:1600115
RGD:13792537
RGD:1624291
G Spin2a spindlin family, member 2A JBrowse link X 17,962,905 17,964,888 RGD:1624291
RGD:13792537
G Spin4 spindlin family, member 4 JBrowse link X 64,217,074 64,221,225 RGD:1624291
G Ssty1 spermiogenesis specific transcript on the Y 1 JBrowse link 1 182,842,610 182,843,357 RGD:13792537
G Suz12 SUZ12 polycomb repressive complex 2 subunit JBrowse link 10 67,325,101 67,371,588 RGD:1624291
RGD:1600115
G Tdrd3 tudor domain containing 3 JBrowse link 15 70,732,164 70,864,855 RGD:1600115
RGD:1624291
G Tp53bp1 tumor protein p53 binding protein 1 JBrowse link 3 113,160,030 113,259,701 RGD:1624291
G Trim24 tripartite motif-containing 24 JBrowse link 4 65,632,278 65,684,746 RGD:1624291
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 JBrowse link 9 10,738,211 10,758,403 RGD:1600115
RGD:1624291
G Wdr5 WD repeat domain 5 JBrowse link 3 6,061,892 6,080,724 RGD:1624291
RGD:1600115
G Zmynd11 zinc finger, MYND-type containing 11 JBrowse link 17 63,825,616 63,914,740 RGD:1624291
G Zmynd8 zinc finger, MYND-type containing 8 JBrowse link 3 162,480,766 162,594,145 RGD:1624291
nucleosomal histone binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit JBrowse link 10 89,104,026 89,139,978 RGD:1624291
G Hmgb2 high mobility group box 2 JBrowse link 16 36,077,615 36,080,191 RGD:2316099
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 JBrowse link 3 159,316,580 159,348,914 RGD:1624291
G Sphk2 sphingosine kinase 2 JBrowse link 1 101,692,972 101,700,604 RGD:1624291
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 JBrowse link 9 10,738,211 10,758,403 RGD:1624291
RGD:1600115
G Vrk1 VRK serine/threonine kinase 1 JBrowse link 6 129,835,788 129,902,839 RGD:1624291
ubiquitin modification-dependent histone binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 JBrowse link 4 9,881,505 9,908,693 RGD:1600115
RGD:1624291
G Tp53bp1 tumor protein p53 binding protein 1 JBrowse link 3 113,160,030 113,259,701 RGD:1624291
G Usp15 ubiquitin specific peptidase 15 JBrowse link 7 66,595,707 66,687,707 RGD:1600115
RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19526
    binding 15909
      protein binding 12626
        histone binding 224
          lysine-acetylated histone binding 19
          methylated histone binding + 91
          nucleosomal histone binding 6
          phosphorylated histone binding 0
          ubiquitin modification-dependent histone binding 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.