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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular modified amino acid biosynthetic process
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Accession:GO:0042398 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of compounds derived from amino acids, organic acids containing one or more amino substituents.
Synonyms:exact_synonym: amino acid derivative biosynthetic process;   cellular amino acid derivative anabolism;   cellular amino acid derivative biosynthesis;   cellular amino acid derivative biosynthetic process;   cellular amino acid derivative formation;   cellular amino acid derivative synthesis;   cellular modified amino acid anabolism;   cellular modified amino acid biosynthesis;   cellular modified amino acid formation;   cellular modified amino acid synthesis


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10-formyltetrahydrofolate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 JBrowse link 6 99,282,850 99,350,367 RGD:1624291
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like JBrowse link 1 40,529,092 40,719,232 RGD:1624291
carnitine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadm acyl-CoA dehydrogenase medium chain JBrowse link 2 260,124,418 260,148,589 RGD:1624291
G Aldh9a1 aldehyde dehydrogenase 9 family, member A1 JBrowse link 13 85,580,828 85,597,497 RGD:68317
RGD:1600115
G Bbox1 gamma-butyrobetaine hydroxylase 1 JBrowse link 3 101,425,684 101,474,848 RGD:632240
RGD:13792537
RGD:1624291
RGD:8554503
RGD:1600115
G Tmlhe trimethyllysine hydroxylase, epsilon JBrowse link 20 237,461 285,125 RGD:70558
RGD:13792537
RGD:1624291
RGD:1600115
carnosine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Carns1 carnosine synthase 1 JBrowse link 1 219,413,897 219,424,533 RGD:1624291
creatine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gamt guanidinoacetate N-methyltransferase JBrowse link 7 12,314,848 12,317,998 RGD:1359081
RGD:13792537
RGD:1624291
RGD:1600115
RGD:632754
G Gatm glycine amidinotransferase JBrowse link 3 114,711,570 114,728,155 RGD:70746
RGD:13792537
RGD:1600115
RGD:1624291
folic acid-containing compound biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fpgs folylpolyglutamate synthase JBrowse link 3 11,717,667 11,729,694 RGD:13792537
G Mthfs methenyltetrahydrofolate synthetase JBrowse link 8 96,564,877 96,614,386 RGD:13792537
glutathione biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gclc glutamate-cysteine ligase, catalytic subunit JBrowse link 8 85,059,051 85,097,471 RGD:1582661
RGD:1624291
RGD:13792537
RGD:1600115
G Gclm glutamate cysteine ligase, modifier subunit JBrowse link 2 225,827,504 225,847,876 RGD:1582661
RGD:1624291
RGD:13792537
RGD:1600115
G Ggt1 gamma-glutamyltransferase 1 JBrowse link 20 14,019,723 14,045,781 RGD:1624291
G Ggt5 gamma-glutamyltransferase 5 JBrowse link 20 13,988,444 14,001,296 RGD:1600115
G Ggt6 gamma-glutamyl transferase 6 JBrowse link 10 58,995,253 58,998,431 RGD:1600115
G Ggt7 gamma-glutamyltransferase 7 JBrowse link 3 151,005,960 151,029,941 RGD:1600115
G Gss glutathione synthetase JBrowse link 3 151,076,254 151,106,557 RGD:1599340
RGD:1600115
G Hagh hydroxyacyl glutathione hydrolase JBrowse link 10 14,215,913 14,230,506 RGD:1600115
RGD:1624291
G Mgst2 microsomal glutathione S-transferase 2 JBrowse link 2 140,708,396 140,727,381 RGD:1624291
glycine betaine biosynthetic process from choline term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh7a1 aldehyde dehydrogenase 7 family, member A1 JBrowse link 18 51,619,007 51,651,267 RGD:1600115
G Chdh choline dehydrogenase JBrowse link 16 6,078,083 6,109,386 RGD:1600115
hydroxylysine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plod2 procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 JBrowse link 8 99,977,334 100,059,736 RGD:1600115
RGD:1624291
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 JBrowse link 12 22,716,421 22,726,982 RGD:1624291
phosphatidylserine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plscr1 phospholipid scramblase 1 JBrowse link 8 99,625,523 99,645,882 RGD:1600115
RGD:1624291
G Ptdss1 phosphatidylserine synthase 1 JBrowse link 7 71,294,140 71,356,153 RGD:1600115
RGD:1624291
G Ptdss2 phosphatidylserine synthase 2 JBrowse link 1 214,122,981 214,148,011 RGD:1600115
RGD:1624291
G Slc27a1 solute carrier family 27 member 1 JBrowse link 16 19,997,823 20,016,193 RGD:1600115
RGD:13792537
RGD:1624291
phosphocreatine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ckb creatine kinase B JBrowse link 6 136,142,956 136,145,838 RGD:13792537
G Ckm creatine kinase, M-type JBrowse link 1 80,321,507 80,331,841 RGD:727227
RGD:13792537
RGD:1600115
RGD:1624291
RGD:1359082
G Ckmt1 creatine kinase, mitochondrial 1 JBrowse link 3 113,318,559 113,324,459 RGD:13792537
RGD:1600115
G Ckmt2 creatine kinase, mitochondrial 2 JBrowse link 2 21,422,680 21,452,797 RGD:13792537
positive regulation of glutathione biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 JBrowse link 4 98,648,513 98,709,695 RGD:1624291
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:1624291
positive regulation of L-dopa biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1624291
RGD:1600115
regulation of glutathione biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc7a11 solute carrier family 7 member 11 JBrowse link 2 139,453,774 139,528,479 RGD:1624291
tetrahydrofolate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 JBrowse link 4 123,516,553 123,564,067 RGD:1547843
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase JBrowse link 9 78,862,013 78,882,061 RGD:2301991
G Dhfr dihydrofolate reductase JBrowse link 2 21,931,887 21,958,927 RGD:1298877
RGD:13792537
RGD:1624291
RGD:1600115
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase JBrowse link 11 31,780,477 31,805,728 RGD:2301990
G Gch1 GTP cyclohydrolase 1 JBrowse link 15 23,935,011 23,968,971 RGD:1600115
tetrahydrofolylpolyglutamate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fpgs folylpolyglutamate synthase JBrowse link 3 11,717,667 11,729,694 RGD:1624291
RGD:13792537

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  biological_process 19676
    metabolic process 11952
      nitrogen compound metabolic process 10058
        organonitrogen compound metabolic process 6978
          organonitrogen compound biosynthetic process 1918
            cellular modified amino acid biosynthetic process 41
              (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine biosynthetic process from asparagine 0
              4-hydroxyproline biosynthetic process 0
              L-dopa biosynthetic process + 1
              O3-(N-acetylglucosamine-1-phosphoryl)-L-serine biosynthetic process 0
              S-methylmethionine biosynthetic process 0
              aerobactin biosynthetic process 0
              amino-acid betaine biosynthetic process + 6
              carnosine biosynthetic process 1
              cellular modified histidine biosynthetic process + 0
              coenzyme B biosynthetic process 0
              creatine biosynthetic process 2
              folic acid-containing compound biosynthetic process + 9
              glutathione biosynthetic process + 12
              hydroxylysine biosynthetic process 2
              lincomycin biosynthetic process 0
              ochratoxin A biosynthetic process 0
              pantothenate biosynthetic process 0
              peptidyl-1-thioglycine biosynthetic process from peptidyl-glycine + 0
              peptidyl-glycine cholesteryl ester biosynthesis from peptidyl-glycine 0
              phosphagen biosynthetic process + 4
              phosphatidylserine biosynthetic process + 4
              prenylcysteine biosynthetic process 0
              pyrrolysine biosynthetic process 0
              sarcosine biosynthetic process 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.